RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 H3BS24 57 aa3.18□□□□□ -1.9
CD44-221ENST00000526000 ATOX1O00244 68 aa3.18□□□□□ -1.9
CD44-221ENST00000526000 MT-ATP8P03928 68 aa3.18□□□□□ -1.9
CD44-221ENST00000526000 SPINK7P58062 85 aa3.17□□□□□ -1.9
CD44-221ENST00000526000 C7orf65Q6ZTY9 151 aa3.17□□□□□ -1.9
CD44-221ENST00000526000 TRAV22A0A0B4J277 110 aa3.16□□□□□ -1.9
CD44-221ENST00000526000 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
CD44-221ENST00000526000 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.9
CD44-221ENST00000526000 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.9
CD44-221ENST00000526000 LOC101927531A0A1B0GV80 90 aa3.15□□□□□ -1.91
CD44-221ENST00000526000 H3BPC8 53 aa3.15□□□□□ -1.91
CD44-221ENST00000526000 Q5W150 140 aa3.15□□□□□ -1.91
CD44-221ENST00000526000 OCR1Q9BZK8 76 aa3.15□□□□□ -1.91
CD44-221ENST00000526000 MP68P56378 58 aa3.14□□□□□ -1.91
CD44-221ENST00000526000 FAM236AA0A1B0GUQ0 79 aa3.13□□□□□ -1.91
CD44-221ENST00000526000 FAM236BA0A1B0GV22 79 aa3.13□□□□□ -1.91
CD44-221ENST00000526000 IGKV2-30P06310 120 aa3.13□□□□□ -1.91
CD44-221ENST00000526000 SEC61GP60059 68 aa3.13□□□□□ -1.91
CD44-221ENST00000526000 IGKV2D-30A0A075B6S6 120 aa3.12□□□□□ -1.91
CD44-221ENST00000526000 TRAV7A0A075B6U4 112 aa3.12□□□□□ -1.91
CD44-221ENST00000526000 H0Y9P7 68 aa3.12□□□□□ -1.91
CD44-221ENST00000526000 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
CD44-221ENST00000526000 C1orf64Q8NEQ6 169 aa3.1□□□□□ -1.91
CD44-221ENST00000526000 CYP4F30PQ9H0H9 118 aa3.1□□□□□ -1.91
CD44-221ENST00000526000 SERP2Q8N6R1 65 aa3.08□□□□□ -1.92
CD44-221ENST00000526000 LINC00208Q96KT6 92 aa3.08□□□□□ -1.92
CD44-221ENST00000526000 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
CD44-221ENST00000526000 A8MUN3 132 aa3.06□□□□□ -1.92
CD44-221ENST00000526000 H1FX-AS1Q4G0G2 97 aa3.05□□□□□ -1.92
CD44-221ENST00000526000 C4orf26Q17RF5 130 aa3.04□□□□□ -1.92
CD44-221ENST00000526000 A6NN06 94 aa3.03□□□□□ -1.92
CD44-221ENST00000526000 COX7CP15954 63 aa3.03□□□□□ -1.92
CD44-221ENST00000526000 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
CD44-221ENST00000526000 V9GYY9 64 aa3.03□□□□□ -1.92
CD44-221ENST00000526000 KLKP1Q107X0 134 aa3.02□□□□□ -1.93
CD44-221ENST00000526000 NDUFC1O43677 76 aa3.01□□□□□ -1.93
CD44-221ENST00000526000 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
CD44-221ENST00000526000 ANAPC13Q9BS18 74 aa3.01□□□□□ -1.93
CD44-221ENST00000526000 SPANXA2-OT1Q8N9U9 137 aa3□□□□□ -1.93
CD44-221ENST00000526000 MT1BP07438 61 aa2.99□□□□□ -1.93
CD44-221ENST00000526000 DMAC1Q96GE9 116 aa2.99□□□□□ -1.93
CD44-221ENST00000526000 KRTAP3-1Q9BYR8 98 aa2.99□□□□□ -1.93
CD44-221ENST00000526000 NEBP20929 6669 aa2.98□□□□□ -1.93
CD44-221ENST00000526000 SNURFQ9Y675 71 aa2.98□□□□□ -1.93
CD44-221ENST00000526000 S4R3F8 94 aa2.98□□□□□ -1.93
CD44-221ENST00000526000 Q5VV11 94 aa2.97□□□□□ -1.93
CD44-221ENST00000526000 ACYP2P14621 99 aa2.96□□□□□ -1.94
CD44-221ENST00000526000 RPS28P62857 69 aaKnown RBP2.96□□□□□ -1.94
CD44-221ENST00000526000 CSAG1Q6PB30 78 aa2.96□□□□□ -1.94
CD44-221ENST00000526000 PRO0628Q9UI54 55 aa2.96□□□□□ -1.94
CD44-221ENST00000526000 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
CD44-221ENST00000526000 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
CD44-221ENST00000526000 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
CD44-221ENST00000526000 LCA10Q71F78 164 aa2.93□□□□□ -1.94
CD44-221ENST00000526000 SPTSSBQ8NFR3 76 aa2.93□□□□□ -1.94
CD44-221ENST00000526000 H7BZZ5 65 aa2.92□□□□□ -1.94
CD44-221ENST00000526000 ATP5EP56381 51 aaPredicted RBP2.92□□□□□ -1.94
CD44-221ENST00000526000 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
CD44-221ENST00000526000 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
CD44-221ENST00000526000 H0YAA0 97 aa2.9□□□□□ -1.95
CD44-221ENST00000526000 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
CD44-221ENST00000526000 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
CD44-221ENST00000526000 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
CD44-221ENST00000526000 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
CD44-221ENST00000526000 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
CD44-221ENST00000526000 TMEM258P61165 79 aa2.88□□□□□ -1.95
CD44-221ENST00000526000 CYSTM1Q9H1C7 97 aa2.87□□□□□ -1.95
CD44-221ENST00000526000 KMT2DO14686 5537 aa2.87□□□□□ -1.95
CD44-221ENST00000526000 SPRR2EP22531 72 aa2.86□□□□□ -1.95
CD44-221ENST00000526000 SPRR2BP35325 72 aa2.86□□□□□ -1.95
CD44-221ENST00000526000 SPRR2AP35326 72 aa2.86□□□□□ -1.95
CD44-221ENST00000526000 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
CD44-221ENST00000526000 COA5Q86WW8 74 aa2.85□□□□□ -1.95
CD44-221ENST00000526000 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
CD44-221ENST00000526000 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
CD44-221ENST00000526000 PMAIP1Q13794 54 aa2.83□□□□□ -1.96
CD44-221ENST00000526000 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
CD44-221ENST00000526000 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
CD44-221ENST00000526000 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
CD44-221ENST00000526000 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
CD44-221ENST00000526000 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
CD44-221ENST00000526000 SERP1Q9Y6X1 66 aa2.78□□□□□ -1.96
CD44-221ENST00000526000 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
CD44-221ENST00000526000 SPRR2DP22532 72 aa2.76□□□□□ -1.97
CD44-221ENST00000526000 M0QZ58 72 aa2.75□□□□□ -1.97
CD44-221ENST00000526000 MT1XP80297 61 aa2.75□□□□□ -1.97
CD44-221ENST00000526000 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
CD44-221ENST00000526000 R4GN34 69 aa2.75□□□□□ -1.97
CD44-221ENST00000526000 P0C880 135 aa2.74□□□□□ -1.97
CD44-221ENST00000526000 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
CD44-221ENST00000526000 PRR15LQ9BU68 103 aa2.74□□□□□ -1.97
CD44-221ENST00000526000 SMIM26A0A096LP01 95 aa2.73□□□□□ -1.97
CD44-221ENST00000526000 PRO2289Q9P1D8 64 aa2.73□□□□□ -1.97
CD44-221ENST00000526000 A0A1B0GU69 56 aa2.72□□□□□ -1.97
CD44-221ENST00000526000 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
CD44-221ENST00000526000 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
CD44-221ENST00000526000 A0A1B0GU33 70 aa2.68□□□□□ -1.98
CD44-221ENST00000526000 Q1T7F1 81 aa2.67□□□□□ -1.98
CD44-221ENST00000526000 LINC01554Q52M75 96 aa2.67□□□□□ -1.98
CD44-221ENST00000526000 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms