RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MT1FP04733 61 aa2.57□□□□□ -2
HMGB1P40-201ENST00000525121 KRTAP3-1Q9BYR8 98 aa2.57□□□□□ -2
HMGB1P40-201ENST00000525121 TRAV7A0A075B6U4 112 aa2.56□□□□□ -2
HMGB1P40-201ENST00000525121 NDUFC1O43677 76 aa2.56□□□□□ -2
HMGB1P40-201ENST00000525121 LCA10Q71F78 164 aa2.56□□□□□ -2
HMGB1P40-201ENST00000525121 CRCT1Q9UGL9 99 aa2.56□□□□□ -2
HMGB1P40-201ENST00000525121 KLKP1Q107X0 134 aa2.55□□□□□ -2
HMGB1P40-201ENST00000525121 V9GYY9 64 aa2.54□□□□□ -2
HMGB1P40-201ENST00000525121 RPS28P62857 69 aaKnown RBP2.53□□□□□ -2
HMGB1P40-201ENST00000525121 ANAPC13Q9BS18 74 aa2.52□□□□□ -2.01
HMGB1P40-201ENST00000525121 KRTAP9-3Q9BYQ3 159 aa2.52□□□□□ -2.01
HMGB1P40-201ENST00000525121 DMAC1Q96GE9 116 aa2.51□□□□□ -2.01
HMGB1P40-201ENST00000525121 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
HMGB1P40-201ENST00000525121 SERP2Q8N6R1 65 aa2.5□□□□□ -2.01
HMGB1P40-201ENST00000525121 ACYP2P14621 99 aa2.49□□□□□ -2.01
HMGB1P40-201ENST00000525121 SPTSSBQ8NFR3 76 aa2.49□□□□□ -2.01
HMGB1P40-201ENST00000525121 H0YAA0 97 aa2.48□□□□□ -2.01
HMGB1P40-201ENST00000525121 CHKB-CPT1BH3BT56 60 aa2.48□□□□□ -2.01
HMGB1P40-201ENST00000525121 C20orf197Q8N268 126 aa2.48□□□□□ -2.01
HMGB1P40-201ENST00000525121 CRIPTQ9P021 101 aa2.48□□□□□ -2.01
HMGB1P40-201ENST00000525121 SNURFQ9Y675 71 aa2.48□□□□□ -2.01
HMGB1P40-201ENST00000525121 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
HMGB1P40-201ENST00000525121 Q5VV11 94 aa2.45□□□□□ -2.02
HMGB1P40-201ENST00000525121 SPANXA2-OT1Q8N9U9 137 aa2.45□□□□□ -2.02
HMGB1P40-201ENST00000525121 CCDC179H3BU77 68 aa2.44□□□□□ -2.02
HMGB1P40-201ENST00000525121 COX7CP15954 63 aa2.44□□□□□ -2.02
HMGB1P40-201ENST00000525121 KRTAP19-1Q8IUB9 90 aa2.44□□□□□ -2.02
HMGB1P40-201ENST00000525121 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
HMGB1P40-201ENST00000525121 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
HMGB1P40-201ENST00000525121 R4GN34 69 aa2.42□□□□□ -2.02
HMGB1P40-201ENST00000525121 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
HMGB1P40-201ENST00000525121 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
HMGB1P40-201ENST00000525121 M0QZ58 72 aa2.39□□□□□ -2.03
HMGB1P40-201ENST00000525121 TMEM258P61165 79 aa2.39□□□□□ -2.03
HMGB1P40-201ENST00000525121 A6NN06 94 aa2.38□□□□□ -2.03
HMGB1P40-201ENST00000525121 P0C880 135 aa2.38□□□□□ -2.03
HMGB1P40-201ENST00000525121 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
HMGB1P40-201ENST00000525121 COA5Q86WW8 74 aa2.38□□□□□ -2.03
HMGB1P40-201ENST00000525121 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P40-201ENST00000525121 H7BZZ5 65 aa2.37□□□□□ -2.03
HMGB1P40-201ENST00000525121 MT1BP07438 61 aa2.37□□□□□ -2.03
HMGB1P40-201ENST00000525121 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
HMGB1P40-201ENST00000525121 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
HMGB1P40-201ENST00000525121 USH2AO75445 5202 aa2.36□□□□□ -2.03
HMGB1P40-201ENST00000525121 ATP5EP56381 51 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P40-201ENST00000525121 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
HMGB1P40-201ENST00000525121 SERP1Q9Y6X1 66 aa2.34□□□□□ -2.03
HMGB1P40-201ENST00000525121 KRTAP10-5P60370 271 aa2.33□□□□□ -2.04
HMGB1P40-201ENST00000525121 CYSTM1Q9H1C7 97 aa2.33□□□□□ -2.04
HMGB1P40-201ENST00000525121 SMIM26A0A096LP01 95 aa2.32□□□□□ -2.04
HMGB1P40-201ENST00000525121 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
HMGB1P40-201ENST00000525121 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
HMGB1P40-201ENST00000525121 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P40-201ENST00000525121 A0A1B0GU69 56 aa2.28□□□□□ -2.04
HMGB1P40-201ENST00000525121 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.04
HMGB1P40-201ENST00000525121 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
HMGB1P40-201ENST00000525121 A0A1B0GU33 70 aa2.27□□□□□ -2.05
HMGB1P40-201ENST00000525121 KTN1-AS1Q86SY8 53 aa2.27□□□□□ -2.05
HMGB1P40-201ENST00000525121 PRR15LQ9BU68 103 aa2.27□□□□□ -2.05
HMGB1P40-201ENST00000525121 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
HMGB1P40-201ENST00000525121 MT1XP80297 61 aa2.25□□□□□ -2.05
HMGB1P40-201ENST00000525121 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
HMGB1P40-201ENST00000525121 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
HMGB1P40-201ENST00000525121 A0A0D9SG42 100 aa2.24□□□□□ -2.05
HMGB1P40-201ENST00000525121 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
HMGB1P40-201ENST00000525121 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
HMGB1P40-201ENST00000525121 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
HMGB1P40-201ENST00000525121 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
HMGB1P40-201ENST00000525121 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
HMGB1P40-201ENST00000525121 LINC01558Q9Y6Z2 57 aa2.2□□□□□ -2.06
HMGB1P40-201ENST00000525121 Q1T7F1 81 aa2.18□□□□□ -2.06
HMGB1P40-201ENST00000525121 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
HMGB1P40-201ENST00000525121 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
HMGB1P40-201ENST00000525121 UQCR11O14957 56 aa2.17□□□□□ -2.06
HMGB1P40-201ENST00000525121 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
HMGB1P40-201ENST00000525121 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
HMGB1P40-201ENST00000525121 A8MU10 97 aa2.15□□□□□ -2.07
HMGB1P40-201ENST00000525121 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
HMGB1P40-201ENST00000525121 LOC100996750A0A140TA64 210 aa2.14□□□□□ -2.07
HMGB1P40-201ENST00000525121 PSPHP1O15172 72 aa2.14□□□□□ -2.07
HMGB1P40-201ENST00000525121 KRTAP10-7P60409 375 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P40-201ENST00000525121 KRTAP10-12P60413 245 aa2.14□□□□□ -2.07
HMGB1P40-201ENST00000525121 KRTAP4-6Q9BYQ5 205 aa2.14□□□□□ -2.07
HMGB1P40-201ENST00000525121 K7ERS5 55 aa2.12□□□□□ -2.07
HMGB1P40-201ENST00000525121 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
HMGB1P40-201ENST00000525121 KRTAP19-4Q3LI73 84 aa2.12□□□□□ -2.07
HMGB1P40-201ENST00000525121 KRTAP4-8A0A0G2JLE6 195 aa2.11□□□□□ -2.07
HMGB1P40-201ENST00000525121 SPRR2EP22531 72 aa2.11□□□□□ -2.07
HMGB1P40-201ENST00000525121 SPRR2BP35325 72 aa2.11□□□□□ -2.07
HMGB1P40-201ENST00000525121 SPRR2AP35326 72 aa2.11□□□□□ -2.07
HMGB1P40-201ENST00000525121 KRTAP4-8Q9BYQ9 185 aa2.11□□□□□ -2.07
HMGB1P40-201ENST00000525121 TNP1P09430 55 aa2.09□□□□□ -2.07
HMGB1P40-201ENST00000525121 A6NED7 52 aa2.08□□□□□ -2.08
HMGB1P40-201ENST00000525121 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
HMGB1P40-201ENST00000525121 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
HMGB1P40-201ENST00000525121 NEBP20929 6669 aa2.07□□□□□ -2.08
HMGB1P40-201ENST00000525121 LCE1AQ5T7P2 110 aa2.05□□□□□ -2.08
HMGB1P40-201ENST00000525121 SPRR2DP22532 72 aa2.04□□□□□ -2.08
HMGB1P40-201ENST00000525121 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
HMGB1P40-201ENST00000525121 KMT2DO14686 5537 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms