RNA–Protein interactions for RNA: ENST00000525095.2

VPS26B-202, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26B, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-202ENST00000525095 S4R3F8 94 aa9.16□□□□□ -0.94
VPS26B-202ENST00000525095 LCA10Q71F78 164 aa9.14□□□□□ -0.95
VPS26B-202ENST00000525095 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
VPS26B-202ENST00000525095 RPS28P62857 69 aaKnown RBP9.08□□□□□ -0.96
VPS26B-202ENST00000525095 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
VPS26B-202ENST00000525095 SPTSSBQ8NFR3 76 aa9.04□□□□□ -0.96
VPS26B-202ENST00000525095 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
VPS26B-202ENST00000525095 MT1HP80294 61 aa9□□□□□ -0.97
VPS26B-202ENST00000525095 CSAG1Q6PB30 78 aa9□□□□□ -0.97
VPS26B-202ENST00000525095 SMIM26A0A096LP01 95 aa8.93□□□□□ -0.98
VPS26B-202ENST00000525095 M0R2T5 61 aa8.91□□□□□ -0.98
VPS26B-202ENST00000525095 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
VPS26B-202ENST00000525095 Q1T7F1 81 aa8.81□□□□□ -1
VPS26B-202ENST00000525095 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
VPS26B-202ENST00000525095 V9GYY9 64 aa8.78□□□□□ -1
VPS26B-202ENST00000525095 H0YAA0 97 aa8.77□□□□□ -1.01
VPS26B-202ENST00000525095 A0A1B0GU69 56 aa8.75□□□□□ -1.01
VPS26B-202ENST00000525095 SEC61GP60059 68 aa8.75□□□□□ -1.01
VPS26B-202ENST00000525095 ADM2Q7Z4H4 148 aa8.75□□□□□ -1.01
VPS26B-202ENST00000525095 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
VPS26B-202ENST00000525095 KRTAP10-6P60371 365 aaPredicted RBP8.7□□□□□ -1.02
VPS26B-202ENST00000525095 PRR15LQ9BU68 103 aa8.7□□□□□ -1.02
VPS26B-202ENST00000525095 PSPHP1O15172 72 aa8.67□□□□□ -1.02
VPS26B-202ENST00000525095 P0C880 135 aa8.67□□□□□ -1.02
VPS26B-202ENST00000525095 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
VPS26B-202ENST00000525095 KRTAP9-8Q9BYQ0 159 aa8.65□□□□□ -1.03
VPS26B-202ENST00000525095 MT2AP02795 61 aa8.6□□□□□ -1.03
VPS26B-202ENST00000525095 Q5VV11 94 aa8.58□□□□□ -1.04
VPS26B-202ENST00000525095 A0A1B0GU33 70 aa8.55□□□□□ -1.04
VPS26B-202ENST00000525095 MT1FP04733 61 aa8.55□□□□□ -1.04
VPS26B-202ENST00000525095 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
VPS26B-202ENST00000525095 PRO0628Q9UI54 55 aa8.49□□□□□ -1.05
VPS26B-202ENST00000525095 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
VPS26B-202ENST00000525095 R4GN34 69 aa8.45□□□□□ -1.06
VPS26B-202ENST00000525095 UQCR11O14957 56 aa8.44□□□□□ -1.06
VPS26B-202ENST00000525095 M0QZ58 72 aa8.44□□□□□ -1.06
VPS26B-202ENST00000525095 KRTAP13-4Q3LI77 160 aa8.43□□□□□ -1.06
VPS26B-202ENST00000525095 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
VPS26B-202ENST00000525095 A6NED7 52 aa8.4□□□□□ -1.06
VPS26B-202ENST00000525095 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
VPS26B-202ENST00000525095 MIR22HGQ0VDD5 57 aa8.33□□□□□ -1.08
VPS26B-202ENST00000525095 SPRR2GQ9BYE4 73 aa8.33□□□□□ -1.08
VPS26B-202ENST00000525095 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
VPS26B-202ENST00000525095 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
VPS26B-202ENST00000525095 A0A0D9SG42 100 aa8.27□□□□□ -1.09
VPS26B-202ENST00000525095 A8MU10 97 aa8.27□□□□□ -1.09
VPS26B-202ENST00000525095 BRK1Q8WUW1 75 aa8.22□□□□□ -1.09
VPS26B-202ENST00000525095 CDC42SE1Q9NRR8 79 aa8.22□□□□□ -1.09
VPS26B-202ENST00000525095 LCE2BO14633 110 aa8.14□□□□□ -1.11
VPS26B-202ENST00000525095 KRTAP19-8Q3LI54 63 aa8.14□□□□□ -1.11
VPS26B-202ENST00000525095 A6NN06 94 aa8.12□□□□□ -1.11
VPS26B-202ENST00000525095 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
VPS26B-202ENST00000525095 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
VPS26B-202ENST00000525095 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
VPS26B-202ENST00000525095 LCE2DQ5TA82 110 aaPredicted RBP8.05□□□□□ -1.12
VPS26B-202ENST00000525095 MT1BP07438 61 aa8.05□□□□□ -1.12
VPS26B-202ENST00000525095 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
VPS26B-202ENST00000525095 K7ERS5 55 aa8□□□□□ -1.13
VPS26B-202ENST00000525095 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
VPS26B-202ENST00000525095 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
VPS26B-202ENST00000525095 USH2AO75445 5202 aa7.9□□□□□ -1.14
VPS26B-202ENST00000525095 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
VPS26B-202ENST00000525095 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
VPS26B-202ENST00000525095 KTN1-AS1Q86SY8 53 aa7.75□□□□□ -1.17
VPS26B-202ENST00000525095 MT1XP80297 61 aa7.74□□□□□ -1.17
VPS26B-202ENST00000525095 KRTAP10-5P60370 271 aa7.73□□□□□ -1.17
VPS26B-202ENST00000525095 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
VPS26B-202ENST00000525095 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
VPS26B-202ENST00000525095 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
VPS26B-202ENST00000525095 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
VPS26B-202ENST00000525095 ROMO1P60602 79 aa7.63□□□□□ -1.19
VPS26B-202ENST00000525095 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
VPS26B-202ENST00000525095 TNP1P09430 55 aa7.48□□□□□ -1.21
VPS26B-202ENST00000525095 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
VPS26B-202ENST00000525095 KRTAP25-1Q3LHN0 102 aa7.44□□□□□ -1.22
VPS26B-202ENST00000525095 KRTAP10-7P60409 375 aaPredicted RBP7.43□□□□□ -1.22
VPS26B-202ENST00000525095 FCGBPQ9Y6R7 5405 aaPredicted RBP7.39□□□□□ -1.23
VPS26B-202ENST00000525095 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
VPS26B-202ENST00000525095 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
VPS26B-202ENST00000525095 LCE3AQ5TA76 89 aa7.2□□□□□ -1.26
VPS26B-202ENST00000525095 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
VPS26B-202ENST00000525095 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
VPS26B-202ENST00000525095 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
VPS26B-202ENST00000525095 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
VPS26B-202ENST00000525095 KMT2DO14686 5537 aa7.13□□□□□ -1.27
VPS26B-202ENST00000525095 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
VPS26B-202ENST00000525095 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
VPS26B-202ENST00000525095 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
VPS26B-202ENST00000525095 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
VPS26B-202ENST00000525095 SYNE2Q8WXH0 6885 aaKnown RBP6.93□□□□□ -1.3
VPS26B-202ENST00000525095 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
VPS26B-202ENST00000525095 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
VPS26B-202ENST00000525095 H3BS24 57 aa6.82□□□□□ -1.32
VPS26B-202ENST00000525095 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
VPS26B-202ENST00000525095 MT1EP04732 61 aa6.8□□□□□ -1.32
VPS26B-202ENST00000525095 KRTAP5-9P26371 169 aa6.79□□□□□ -1.32
VPS26B-202ENST00000525095 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
VPS26B-202ENST00000525095 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
VPS26B-202ENST00000525095 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
VPS26B-202ENST00000525095 MT1LQ93083 61 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms