RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 A0A1B0GU69 56 aa7.88□□□□□ -1.15
BEST1-204ENST00000524926 SPTSSBQ8NFR3 76 aa7.87□□□□□ -1.15
BEST1-204ENST00000524926 A6NED7 52 aa7.86□□□□□ -1.15
BEST1-204ENST00000524926 A8MU10 97 aa7.77□□□□□ -1.17
BEST1-204ENST00000524926 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
BEST1-204ENST00000524926 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
BEST1-204ENST00000524926 LCA10Q71F78 164 aa7.74□□□□□ -1.17
BEST1-204ENST00000524926 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.17
BEST1-204ENST00000524926 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
BEST1-204ENST00000524926 S4R3F8 94 aa7.7□□□□□ -1.18
BEST1-204ENST00000524926 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
BEST1-204ENST00000524926 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
BEST1-204ENST00000524926 UQCR11O14957 56 aa7.66□□□□□ -1.18
BEST1-204ENST00000524926 HERC1Q15751 4861 aa7.64□□□□□ -1.19
BEST1-204ENST00000524926 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
BEST1-204ENST00000524926 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
BEST1-204ENST00000524926 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
BEST1-204ENST00000524926 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
BEST1-204ENST00000524926 H3BS24 57 aa7.58□□□□□ -1.2
BEST1-204ENST00000524926 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
BEST1-204ENST00000524926 A0A1B0GU33 70 aa7.56□□□□□ -1.2
BEST1-204ENST00000524926 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
BEST1-204ENST00000524926 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
BEST1-204ENST00000524926 H0YAA0 97 aa7.47□□□□□ -1.21
BEST1-204ENST00000524926 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
BEST1-204ENST00000524926 MUC2Q02817 5179 aa7.46□□□□□ -1.22
BEST1-204ENST00000524926 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
BEST1-204ENST00000524926 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
BEST1-204ENST00000524926 A6NN06 94 aa7.41□□□□□ -1.22
BEST1-204ENST00000524926 P0C880 135 aa7.4□□□□□ -1.22
BEST1-204ENST00000524926 KRTAP19-2Q3LHN2 52 aa7.37□□□□□ -1.23
BEST1-204ENST00000524926 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
BEST1-204ENST00000524926 A0A0D9SG42 100 aa7.27□□□□□ -1.25
BEST1-204ENST00000524926 UBR4Q5T4S7 5183 aa7.22□□□□□ -1.25
BEST1-204ENST00000524926 K7ERS5 55 aa7.21□□□□□ -1.25
BEST1-204ENST00000524926 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
BEST1-204ENST00000524926 M0QZ58 72 aa7.19□□□□□ -1.26
BEST1-204ENST00000524926 RNF213Q63HN8 5207 aa7.18□□□□□ -1.26
BEST1-204ENST00000524926 PRAC1Q96KF2 57 aa7.15□□□□□ -1.26
BEST1-204ENST00000524926 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.27
BEST1-204ENST00000524926 R4GN34 69 aa7.14□□□□□ -1.27
BEST1-204ENST00000524926 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
BEST1-204ENST00000524926 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
BEST1-204ENST00000524926 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
BEST1-204ENST00000524926 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
BEST1-204ENST00000524926 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
BEST1-204ENST00000524926 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
BEST1-204ENST00000524926 M0R2T5 61 aa7.01□□□□□ -1.29
BEST1-204ENST00000524926 MT1HP80294 61 aa6.98□□□□□ -1.29
BEST1-204ENST00000524926 ROMO1P60602 79 aa6.95□□□□□ -1.3
BEST1-204ENST00000524926 A0A0A0MQY5 61 aa6.92□□□□□ -1.3
BEST1-204ENST00000524926 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
BEST1-204ENST00000524926 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
BEST1-204ENST00000524926 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
BEST1-204ENST00000524926 MT2AP02795 61 aa6.76□□□□□ -1.33
BEST1-204ENST00000524926 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
BEST1-204ENST00000524926 MT1FP04733 61 aa6.74□□□□□ -1.33
BEST1-204ENST00000524926 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
BEST1-204ENST00000524926 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.33
BEST1-204ENST00000524926 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
BEST1-204ENST00000524926 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
BEST1-204ENST00000524926 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
BEST1-204ENST00000524926 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
BEST1-204ENST00000524926 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
BEST1-204ENST00000524926 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
BEST1-204ENST00000524926 MT1BP07438 61 aa6.41□□□□□ -1.38
BEST1-204ENST00000524926 TNP1P09430 55 aa6.41□□□□□ -1.38
BEST1-204ENST00000524926 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
BEST1-204ENST00000524926 LCE2BO14633 110 aa6.29□□□□□ -1.4
BEST1-204ENST00000524926 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
BEST1-204ENST00000524926 MT1XP80297 61 aa6.26□□□□□ -1.41
BEST1-204ENST00000524926 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
BEST1-204ENST00000524926 USH2AO75445 5202 aa6.2□□□□□ -1.42
BEST1-204ENST00000524926 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
BEST1-204ENST00000524926 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
BEST1-204ENST00000524926 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
BEST1-204ENST00000524926 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
BEST1-204ENST00000524926 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
BEST1-204ENST00000524926 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
BEST1-204ENST00000524926 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
BEST1-204ENST00000524926 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
BEST1-204ENST00000524926 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
BEST1-204ENST00000524926 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
BEST1-204ENST00000524926 SSPOA2VEC9 5147 aa5.91□□□□□ -1.46
BEST1-204ENST00000524926 KMT2DO14686 5537 aa5.86□□□□□ -1.47
BEST1-204ENST00000524926 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
BEST1-204ENST00000524926 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
BEST1-204ENST00000524926 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
BEST1-204ENST00000524926 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
BEST1-204ENST00000524926 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
BEST1-204ENST00000524926 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
BEST1-204ENST00000524926 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.51
BEST1-204ENST00000524926 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
BEST1-204ENST00000524926 KRTAP9-2Q9BYQ4 174 aa5.49□□□□□ -1.53
BEST1-204ENST00000524926 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
BEST1-204ENST00000524926 MT1EP04732 61 aa5.46□□□□□ -1.53
BEST1-204ENST00000524926 MT1LQ93083 61 aa5.39□□□□□ -1.55
BEST1-204ENST00000524926 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
BEST1-204ENST00000524926 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.56
BEST1-204ENST00000524926 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms