RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 Q5VV11 94 aa5.06□□□□□ -1.6
VPS13B-212ENST00000524330 A6NED7 52 aa5.05□□□□□ -1.6
VPS13B-212ENST00000524330 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
VPS13B-212ENST00000524330 CSAG1Q6PB30 78 aa5.01□□□□□ -1.61
VPS13B-212ENST00000524330 LCA10Q71F78 164 aa5.01□□□□□ -1.61
VPS13B-212ENST00000524330 UQCR11O14957 56 aa5□□□□□ -1.61
VPS13B-212ENST00000524330 PRO0628Q9UI54 55 aa4.97□□□□□ -1.61
VPS13B-212ENST00000524330 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
VPS13B-212ENST00000524330 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
VPS13B-212ENST00000524330 LRP2P98164 4655 aa4.93□□□□□ -1.62
VPS13B-212ENST00000524330 A0A1B0GU33 70 aa4.92□□□□□ -1.62
VPS13B-212ENST00000524330 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
VPS13B-212ENST00000524330 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
VPS13B-212ENST00000524330 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
VPS13B-212ENST00000524330 LPAP08519 4548 aa4.9□□□□□ -1.63
VPS13B-212ENST00000524330 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.63
VPS13B-212ENST00000524330 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
VPS13B-212ENST00000524330 H0YAA0 97 aa4.88□□□□□ -1.63
VPS13B-212ENST00000524330 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
VPS13B-212ENST00000524330 HERC1Q15751 4861 aa4.85□□□□□ -1.63
VPS13B-212ENST00000524330 K7ERS5 55 aa4.83□□□□□ -1.64
VPS13B-212ENST00000524330 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
VPS13B-212ENST00000524330 M0QZ58 72 aa4.79□□□□□ -1.64
VPS13B-212ENST00000524330 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-212ENST00000524330 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
VPS13B-212ENST00000524330 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
VPS13B-212ENST00000524330 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
VPS13B-212ENST00000524330 P0C880 135 aa4.75□□□□□ -1.65
VPS13B-212ENST00000524330 A8MU10 97 aa4.72□□□□□ -1.65
VPS13B-212ENST00000524330 M0R2T5 61 aa4.72□□□□□ -1.65
VPS13B-212ENST00000524330 R4GN34 69 aa4.72□□□□□ -1.65
VPS13B-212ENST00000524330 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
VPS13B-212ENST00000524330 A0A0D9SG42 100 aa4.66□□□□□ -1.66
VPS13B-212ENST00000524330 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
VPS13B-212ENST00000524330 A6NN06 94 aa4.65□□□□□ -1.67
VPS13B-212ENST00000524330 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
VPS13B-212ENST00000524330 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
VPS13B-212ENST00000524330 MT1HP80294 61 aa4.62□□□□□ -1.67
VPS13B-212ENST00000524330 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
VPS13B-212ENST00000524330 LINC01554Q52M75 96 aa4.59□□□□□ -1.67
VPS13B-212ENST00000524330 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
VPS13B-212ENST00000524330 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
VPS13B-212ENST00000524330 RNF213Q63HN8 5207 aa4.53□□□□□ -1.68
VPS13B-212ENST00000524330 LORP23490 312 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-212ENST00000524330 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
VPS13B-212ENST00000524330 ROMO1P60602 79 aa4.51□□□□□ -1.69
VPS13B-212ENST00000524330 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
VPS13B-212ENST00000524330 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
VPS13B-212ENST00000524330 MUC2Q02817 5179 aa4.46□□□□□ -1.7
VPS13B-212ENST00000524330 MT2AP02795 61 aa4.45□□□□□ -1.7
VPS13B-212ENST00000524330 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
VPS13B-212ENST00000524330 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
VPS13B-212ENST00000524330 UBR4Q5T4S7 5183 aa4.45□□□□□ -1.7
VPS13B-212ENST00000524330 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
VPS13B-212ENST00000524330 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
VPS13B-212ENST00000524330 MT1FP04733 61 aa4.4□□□□□ -1.71
VPS13B-212ENST00000524330 H3BS24 57 aa4.36□□□□□ -1.71
VPS13B-212ENST00000524330 LCE2AQ5TA79 106 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-212ENST00000524330 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
VPS13B-212ENST00000524330 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
VPS13B-212ENST00000524330 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
VPS13B-212ENST00000524330 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
VPS13B-212ENST00000524330 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
VPS13B-212ENST00000524330 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
VPS13B-212ENST00000524330 TNP1P09430 55 aa4.26□□□□□ -1.73
VPS13B-212ENST00000524330 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
VPS13B-212ENST00000524330 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
VPS13B-212ENST00000524330 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
VPS13B-212ENST00000524330 MT1BP07438 61 aa4.19□□□□□ -1.74
VPS13B-212ENST00000524330 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
VPS13B-212ENST00000524330 LCE2BO14633 110 aa4.11□□□□□ -1.75
VPS13B-212ENST00000524330 MT1XP80297 61 aa4.08□□□□□ -1.76
VPS13B-212ENST00000524330 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
VPS13B-212ENST00000524330 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
VPS13B-212ENST00000524330 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
VPS13B-212ENST00000524330 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
VPS13B-212ENST00000524330 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
VPS13B-212ENST00000524330 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.79
VPS13B-212ENST00000524330 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
VPS13B-212ENST00000524330 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
VPS13B-212ENST00000524330 USH2AO75445 5202 aa3.83□□□□□ -1.8
VPS13B-212ENST00000524330 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
VPS13B-212ENST00000524330 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
VPS13B-212ENST00000524330 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
VPS13B-212ENST00000524330 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
VPS13B-212ENST00000524330 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
VPS13B-212ENST00000524330 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
VPS13B-212ENST00000524330 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
VPS13B-212ENST00000524330 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
VPS13B-212ENST00000524330 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
VPS13B-212ENST00000524330 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
VPS13B-212ENST00000524330 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
VPS13B-212ENST00000524330 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
VPS13B-212ENST00000524330 MT1EP04732 61 aa3.59□□□□□ -1.83
VPS13B-212ENST00000524330 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
VPS13B-212ENST00000524330 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
VPS13B-212ENST00000524330 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-212ENST00000524330 MT1LQ93083 61 aa3.53□□□□□ -1.84
VPS13B-212ENST00000524330 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
VPS13B-212ENST00000524330 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms