RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 C9orf92A6NGG3 77 aa12.17□□□□□ -0.46
NKX6-3-202ENST00000524115 A6NN06 94 aa12.14□□□□□ -0.47
NKX6-3-202ENST00000524115 UQCR11O14957 56 aa12.13□□□□□ -0.47
NKX6-3-202ENST00000524115 LRP2P98164 4655 aa12.12□□□□□ -0.47
NKX6-3-202ENST00000524115 SPATA8Q6RVD6 105 aa12.11□□□□□ -0.47
NKX6-3-202ENST00000524115 KTN1-AS1Q86SY8 53 aa12.11□□□□□ -0.47
NKX6-3-202ENST00000524115 SEC61GP60059 68 aa12.1□□□□□ -0.47
NKX6-3-202ENST00000524115 MIR22HGQ0VDD5 57 aa12.03□□□□□ -0.48
NKX6-3-202ENST00000524115 COX6B2Q6YFQ2 88 aa11.91□□□□□ -0.5
NKX6-3-202ENST00000524115 LPAP08519 4548 aa11.9□□□□□ -0.5
NKX6-3-202ENST00000524115 KRTAP3-1Q9BYR8 98 aa11.88□□□□□ -0.51
NKX6-3-202ENST00000524115 RNF213Q63HN8 5207 aa11.87□□□□□ -0.51
NKX6-3-202ENST00000524115 RPL37P61927 97 aaKnown RBP11.81□□□□□ -0.52
NKX6-3-202ENST00000524115 A0A1B0GU33 70 aa11.7□□□□□ -0.54
NKX6-3-202ENST00000524115 XP32Q5T750 250 aa11.68□□□□□ -0.54
NKX6-3-202ENST00000524115 H1FX-AS1Q4G0G2 97 aa11.66□□□□□ -0.54
NKX6-3-202ENST00000524115 RBM12B-AS1Q9P1G2 102 aa11.64□□□□□ -0.55
NKX6-3-202ENST00000524115 H0YAA0 97 aa11.56□□□□□ -0.56
NKX6-3-202ENST00000524115 TPRXLQ17RH7 258 aa11.56□□□□□ -0.56
NKX6-3-202ENST00000524115 MUC2Q02817 5179 aa11.55□□□□□ -0.56
NKX6-3-202ENST00000524115 S4R3F8 94 aa11.48□□□□□ -0.57
NKX6-3-202ENST00000524115 K7ERS5 55 aa11.45□□□□□ -0.58
NKX6-3-202ENST00000524115 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
NKX6-3-202ENST00000524115 PRAC1Q96KF2 57 aa11.38□□□□□ -0.59
NKX6-3-202ENST00000524115 MUC17Q685J3 4493 aa11.38□□□□□ -0.59
NKX6-3-202ENST00000524115 ADM2Q7Z4H4 148 aa11.34□□□□□ -0.59
NKX6-3-202ENST00000524115 KRTAP10-6P60371 365 aaPredicted RBP11.3□□□□□ -0.6
NKX6-3-202ENST00000524115 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
NKX6-3-202ENST00000524115 FAT4Q6V0I7 4981 aa11.22□□□□□ -0.61
NKX6-3-202ENST00000524115 SEC61BP60468 96 aaKnown RBP11.2□□□□□ -0.62
NKX6-3-202ENST00000524115 CSAG1Q6PB30 78 aa11.18□□□□□ -0.62
NKX6-3-202ENST00000524115 LINC01554Q52M75 96 aa11.17□□□□□ -0.62
NKX6-3-202ENST00000524115 KRTAP4-1Q9BYQ7 146 aa11.13□□□□□ -0.63
NKX6-3-202ENST00000524115 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
NKX6-3-202ENST00000524115 KRTAP13-4Q3LI77 160 aa11.04□□□□□ -0.64
NKX6-3-202ENST00000524115 P0C880 135 aa11.03□□□□□ -0.64
NKX6-3-202ENST00000524115 KRTAP25-1Q3LHN0 102 aa11.03□□□□□ -0.64
NKX6-3-202ENST00000524115 ROMO1P60602 79 aa11.02□□□□□ -0.64
NKX6-3-202ENST00000524115 M0QZ58 72 aa10.98□□□□□ -0.65
NKX6-3-202ENST00000524115 A0A0D9SG42 100 aa10.97□□□□□ -0.65
NKX6-3-202ENST00000524115 LCE2CQ5TA81 110 aa10.83□□□□□ -0.68
NKX6-3-202ENST00000524115 KRTAP19-2Q3LHN2 52 aa10.82□□□□□ -0.68
NKX6-3-202ENST00000524115 KRTAP9-2Q9BYQ4 174 aa10.82□□□□□ -0.68
NKX6-3-202ENST00000524115 KRTAP12-1P59990 96 aa10.74□□□□□ -0.69
NKX6-3-202ENST00000524115 KRTAP12-2P59991 146 aa10.73□□□□□ -0.69
NKX6-3-202ENST00000524115 SPINT4Q6UDR6 99 aa10.69□□□□□ -0.7
NKX6-3-202ENST00000524115 MT1HP80294 61 aa10.69□□□□□ -0.7
NKX6-3-202ENST00000524115 R4GN34 69 aa10.62□□□□□ -0.71
NKX6-3-202ENST00000524115 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
NKX6-3-202ENST00000524115 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
NKX6-3-202ENST00000524115 M0R2T5 61 aa10.5□□□□□ -0.73
NKX6-3-202ENST00000524115 LORP23490 312 aaPredicted RBP10.47□□□□□ -0.73
NKX6-3-202ENST00000524115 FLGP20930 4061 aaPredicted RBP10.46□□□□□ -0.74
NKX6-3-202ENST00000524115 KRTAP9-6A0A140TA67 174 aa10.43□□□□□ -0.74
NKX6-3-202ENST00000524115 C10orf95Q9H7T3 257 aa10.33□□□□□ -0.76
NKX6-3-202ENST00000524115 FSIP2Q5CZC0 6907 aa10.31□□□□□ -0.76
NKX6-3-202ENST00000524115 CRCT1Q9UGL9 99 aa10.23□□□□□ -0.77
NKX6-3-202ENST00000524115 KRTAP9-8Q9BYQ0 159 aa10.13□□□□□ -0.79
NKX6-3-202ENST00000524115 CAMK2N1Q7Z7J9 78 aa10.06□□□□□ -0.8
NKX6-3-202ENST00000524115 PP632Q6XCG6 107 aa9.99□□□□□ -0.81
NKX6-3-202ENST00000524115 MT2AP02795 61 aa9.98□□□□□ -0.81
NKX6-3-202ENST00000524115 KRTAP15-1Q3LI76 137 aa9.96□□□□□ -0.82
NKX6-3-202ENST00000524115 MT1FP04733 61 aa9.9□□□□□ -0.82
NKX6-3-202ENST00000524115 KRTAP10-10P60014 251 aa9.87□□□□□ -0.83
NKX6-3-202ENST00000524115 USH2AO75445 5202 aa9.84□□□□□ -0.83
NKX6-3-202ENST00000524115 KRTAP9-3Q9BYQ3 159 aa9.81□□□□□ -0.84
NKX6-3-202ENST00000524115 KRTAP23-1A1A580 65 aa9.77□□□□□ -0.84
NKX6-3-202ENST00000524115 H3BS24 57 aa9.77□□□□□ -0.85
NKX6-3-202ENST00000524115 SPRR2GQ9BYE4 73 aa9.77□□□□□ -0.85
NKX6-3-202ENST00000524115 LCE2BO14633 110 aa9.75□□□□□ -0.85
NKX6-3-202ENST00000524115 TNP1P09430 55 aa9.75□□□□□ -0.85
NKX6-3-202ENST00000524115 SSPOA2VEC9 5147 aa9.75□□□□□ -0.85
NKX6-3-202ENST00000524115 PLAC4Q8WY50 150 aa9.7□□□□□ -0.86
NKX6-3-202ENST00000524115 KRTAP19-1Q8IUB9 90 aa9.58□□□□□ -0.88
NKX6-3-202ENST00000524115 NDUFAF8A1L188 74 aa9.55□□□□□ -0.88
NKX6-3-202ENST00000524115 FCGBPQ9Y6R7 5405 aaPredicted RBP9.53□□□□□ -0.88
NKX6-3-202ENST00000524115 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.51□□□□□ -0.89
NKX6-3-202ENST00000524115 KRTAP19-6Q3LI70 58 aa9.39□□□□□ -0.91
NKX6-3-202ENST00000524115 KRTAP9-7A8MTY7 169 aa9.39□□□□□ -0.91
NKX6-3-202ENST00000524115 KRTAP19-8Q3LI54 63 aa9.39□□□□□ -0.91
NKX6-3-202ENST00000524115 LUZP6Q538Z0 58 aa9.29□□□□□ -0.92
NKX6-3-202ENST00000524115 MACF1Q9UPN3 7388 aaKnown RBP9.23□□□□□ -0.93
NKX6-3-202ENST00000524115 SYNE2Q8WXH0 6885 aaKnown RBP9.15□□□□□ -0.94
NKX6-3-202ENST00000524115 MT1BP07438 61 aa9.12□□□□□ -0.95
NKX6-3-202ENST00000524115 SPRR5A0A1B0GTR4 108 aa9.1□□□□□ -0.95
NKX6-3-202ENST00000524115 LCE3AQ5TA76 89 aa9.07□□□□□ -0.96
NKX6-3-202ENST00000524115 KRTAP10-5P60370 271 aa9.02□□□□□ -0.97
NKX6-3-202ENST00000524115 MT1XP80297 61 aa9□□□□□ -0.97
NKX6-3-202ENST00000524115 KRTAP8-1Q8IUC2 63 aa9□□□□□ -0.97
NKX6-3-202ENST00000524115 PRO2289Q9P1D8 64 aa8.97□□□□□ -0.97
NKX6-3-202ENST00000524115 KRTAP6-3Q3LI67 103 aa8.91□□□□□ -0.98
NKX6-3-202ENST00000524115 KRTAP10-12P60413 245 aa8.87□□□□□ -0.99
NKX6-3-202ENST00000524115 KRTAP12-3P60328 96 aa8.73□□□□□ -1.01
NKX6-3-202ENST00000524115 A0A0A0MQY5 61 aa8.72□□□□□ -1.01
NKX6-3-202ENST00000524115 KRTAP10-7P60409 375 aaPredicted RBP8.66□□□□□ -1.02
NKX6-3-202ENST00000524115 NEBP20929 6669 aa8.59□□□□□ -1.03
NKX6-3-202ENST00000524115 MUC12Q9UKN1 5478 aa8.55□□□□□ -1.04
NKX6-3-202ENST00000524115 KRTAP5-9P26371 169 aa8.51□□□□□ -1.05
NKX6-3-202ENST00000524115 KMT2DO14686 5537 aa8.45□□□□□ -1.06
NKX6-3-202ENST00000524115 MDN1Q9NU22 5596 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms