RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 ATOX1O00244 68 aa4.06□□□□□ -1.76
CTNNA1-240ENST00000523912 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
CTNNA1-240ENST00000523912 LOC101927531A0A1B0GV80 90 aa4.05□□□□□ -1.76
CTNNA1-240ENST00000523912 H0Y9P7 68 aa4.04□□□□□ -1.76
CTNNA1-240ENST00000523912 SCGB1A1P11684 91 aa4.04□□□□□ -1.76
CTNNA1-240ENST00000523912 Q5VV11 94 aa4.04□□□□□ -1.76
CTNNA1-240ENST00000523912 LCA10Q71F78 164 aa4.04□□□□□ -1.76
CTNNA1-240ENST00000523912 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
CTNNA1-240ENST00000523912 A6NN06 94 aa4.02□□□□□ -1.77
CTNNA1-240ENST00000523912 MP68P56378 58 aa4.02□□□□□ -1.77
CTNNA1-240ENST00000523912 SMIM20Q8N5G0 67 aa4.01□□□□□ -1.77
CTNNA1-240ENST00000523912 CYP4F30PQ9H0H9 118 aa4.01□□□□□ -1.77
CTNNA1-240ENST00000523912 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
CTNNA1-240ENST00000523912 H3BPC8 53 aa3.99□□□□□ -1.77
CTNNA1-240ENST00000523912 KLKP1Q107X0 134 aa3.99□□□□□ -1.77
CTNNA1-240ENST00000523912 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
CTNNA1-240ENST00000523912 LINC00208Q96KT6 92 aa3.98□□□□□ -1.77
CTNNA1-240ENST00000523912 TRAV7A0A075B6U4 112 aa3.97□□□□□ -1.77
CTNNA1-240ENST00000523912 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
CTNNA1-240ENST00000523912 CRIPTQ9P021 101 aa3.97□□□□□ -1.77
CTNNA1-240ENST00000523912 MT1BP07438 61 aa3.96□□□□□ -1.78
CTNNA1-240ENST00000523912 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
CTNNA1-240ENST00000523912 NDUFC1O43677 76 aa3.93□□□□□ -1.78
CTNNA1-240ENST00000523912 SERP2Q8N6R1 65 aa3.92□□□□□ -1.78
CTNNA1-240ENST00000523912 KRTAP3-3Q9BYR6 98 aa3.92□□□□□ -1.78
CTNNA1-240ENST00000523912 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
CTNNA1-240ENST00000523912 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.78
CTNNA1-240ENST00000523912 A8MUN3 132 aa3.9□□□□□ -1.79
CTNNA1-240ENST00000523912 H0YAA0 97 aa3.89□□□□□ -1.79
CTNNA1-240ENST00000523912 C20orf197Q8N268 126 aa3.87□□□□□ -1.79
CTNNA1-240ENST00000523912 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
CTNNA1-240ENST00000523912 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
CTNNA1-240ENST00000523912 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
CTNNA1-240ENST00000523912 SNURFQ9Y675 71 aa3.86□□□□□ -1.79
CTNNA1-240ENST00000523912 COX7CP15954 63 aa3.85□□□□□ -1.79
CTNNA1-240ENST00000523912 ADM2Q7Z4H4 148 aa3.84□□□□□ -1.79
CTNNA1-240ENST00000523912 KMT2DO14686 5537 aa3.83□□□□□ -1.8
CTNNA1-240ENST00000523912 ANAPC13Q9BS18 74 aa3.83□□□□□ -1.8
CTNNA1-240ENST00000523912 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
CTNNA1-240ENST00000523912 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
CTNNA1-240ENST00000523912 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
CTNNA1-240ENST00000523912 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
CTNNA1-240ENST00000523912 ACYP2P14621 99 aa3.78□□□□□ -1.8
CTNNA1-240ENST00000523912 R4GN34 69 aa3.78□□□□□ -1.8
CTNNA1-240ENST00000523912 H7BZZ5 65 aa3.76□□□□□ -1.81
CTNNA1-240ENST00000523912 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
CTNNA1-240ENST00000523912 M0QZ58 72 aa3.74□□□□□ -1.81
CTNNA1-240ENST00000523912 CHKB-CPT1BH3BT56 60 aa3.73□□□□□ -1.81
CTNNA1-240ENST00000523912 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
CTNNA1-240ENST00000523912 SPTSSBQ8NFR3 76 aa3.72□□□□□ -1.81
CTNNA1-240ENST00000523912 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CTNNA1-240ENST00000523912 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
CTNNA1-240ENST00000523912 SPRR2EP22531 72 aa3.71□□□□□ -1.82
CTNNA1-240ENST00000523912 SPRR2BP35325 72 aa3.71□□□□□ -1.82
CTNNA1-240ENST00000523912 SPRR2AP35326 72 aa3.71□□□□□ -1.82
CTNNA1-240ENST00000523912 MT1XP80297 61 aa3.71□□□□□ -1.82
CTNNA1-240ENST00000523912 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
CTNNA1-240ENST00000523912 P0C880 135 aa3.7□□□□□ -1.82
CTNNA1-240ENST00000523912 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
CTNNA1-240ENST00000523912 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
CTNNA1-240ENST00000523912 COA5Q86WW8 74 aa3.68□□□□□ -1.82
CTNNA1-240ENST00000523912 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
CTNNA1-240ENST00000523912 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
CTNNA1-240ENST00000523912 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
CTNNA1-240ENST00000523912 TMEM258P61165 79 aa3.64□□□□□ -1.83
CTNNA1-240ENST00000523912 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
CTNNA1-240ENST00000523912 SPRR2DP22532 72 aa3.59□□□□□ -1.83
CTNNA1-240ENST00000523912 SEC61GP60059 68 aa3.55□□□□□ -1.84
CTNNA1-240ENST00000523912 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
CTNNA1-240ENST00000523912 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
CTNNA1-240ENST00000523912 PCP4P48539 62 aa3.53□□□□□ -1.84
CTNNA1-240ENST00000523912 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-240ENST00000523912 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
CTNNA1-240ENST00000523912 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
CTNNA1-240ENST00000523912 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
CTNNA1-240ENST00000523912 A0A1B0GU69 56 aa3.5□□□□□ -1.85
CTNNA1-240ENST00000523912 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
CTNNA1-240ENST00000523912 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
CTNNA1-240ENST00000523912 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
CTNNA1-240ENST00000523912 A0A1B0GU33 70 aa3.45□□□□□ -1.86
CTNNA1-240ENST00000523912 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
CTNNA1-240ENST00000523912 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CTNNA1-240ENST00000523912 SPATA8Q6RVD6 105 aa3.4□□□□□ -1.87
CTNNA1-240ENST00000523912 V9GYY9 64 aa3.39□□□□□ -1.87
CTNNA1-240ENST00000523912 SMIM26A0A096LP01 95 aa3.37□□□□□ -1.87
CTNNA1-240ENST00000523912 A0A0D9SG42 100 aa3.37□□□□□ -1.87
CTNNA1-240ENST00000523912 Q1T7F1 81 aa3.37□□□□□ -1.87
CTNNA1-240ENST00000523912 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-240ENST00000523912 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
CTNNA1-240ENST00000523912 UQCR11O14957 56 aa3.34□□□□□ -1.87
CTNNA1-240ENST00000523912 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
CTNNA1-240ENST00000523912 A8MU10 97 aa3.32□□□□□ -1.88
CTNNA1-240ENST00000523912 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
CTNNA1-240ENST00000523912 PSPHP1O15172 72 aa3.31□□□□□ -1.88
CTNNA1-240ENST00000523912 MT1EP04732 61 aa3.31□□□□□ -1.88
CTNNA1-240ENST00000523912 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
CTNNA1-240ENST00000523912 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
CTNNA1-240ENST00000523912 H3BS24 57 aa3.3□□□□□ -1.88
CTNNA1-240ENST00000523912 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
CTNNA1-240ENST00000523912 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms