RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-206ENST00000519259 LYSTQ99698 3801 aa1.83□□□□□ -2.12
SREK1-206ENST00000519259 LCE2DQ5TA82 110 aaPredicted RBP1.83□□□□□ -2.12
SREK1-206ENST00000519259 MT1HP80294 61 aa1.82□□□□□ -2.12
SREK1-206ENST00000519259 CDH23Q9H251 3354 aa1.82□□□□□ -2.12
SREK1-206ENST00000519259 FAT4Q6V0I7 4981 aa1.82□□□□□ -2.12
SREK1-206ENST00000519259 LRP2P98164 4655 aa1.82□□□□□ -2.12
SREK1-206ENST00000519259 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
SREK1-206ENST00000519259 KRTAP23-1A1A580 65 aa1.81□□□□□ -2.12
SREK1-206ENST00000519259 RNF213Q63HN8 5207 aa1.81□□□□□ -2.12
SREK1-206ENST00000519259 KRTAP10-6P60371 365 aaPredicted RBP1.8□□□□□ -2.12
SREK1-206ENST00000519259 TRRAPQ9Y4A5 3859 aa1.8□□□□□ -2.12
SREK1-206ENST00000519259 DCHS1Q96JQ0 3298 aa1.8□□□□□ -2.12
SREK1-206ENST00000519259 SVEP1Q4LDE5 3571 aa1.79□□□□□ -2.12
SREK1-206ENST00000519259 PKD1L1Q8TDX9 2849 aa1.79□□□□□ -2.12
SREK1-206ENST00000519259 MUC17Q685J3 4493 aa1.79□□□□□ -2.12
SREK1-206ENST00000519259 TNP1P09430 55 aa1.78□□□□□ -2.12
SREK1-206ENST00000519259 CSMD3Q7Z407 3707 aa1.78□□□□□ -2.12
SREK1-206ENST00000519259 KRTAP3-1Q9BYR8 98 aa1.78□□□□□ -2.12
SREK1-206ENST00000519259 STAB2Q8WWQ8 2551 aa1.78□□□□□ -2.13
SREK1-206ENST00000519259 LCE2AQ5TA79 106 aaPredicted RBP1.77□□□□□ -2.13
SREK1-206ENST00000519259 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
SREK1-206ENST00000519259 CYSTM1Q9H1C7 97 aa1.77□□□□□ -2.13
SREK1-206ENST00000519259 MT2AP02795 61 aa1.77□□□□□ -2.13
SREK1-206ENST00000519259 KRTAP25-1Q3LHN0 102 aa1.76□□□□□ -2.13
SREK1-206ENST00000519259 HRNRQ86YZ3 2850 aaPredicted RBP1.75□□□□□ -2.13
SREK1-206ENST00000519259 SPATA8Q6RVD6 105 aa1.75□□□□□ -2.13
SREK1-206ENST00000519259 DNAH3Q8TD57 4116 aa1.74□□□□□ -2.13
SREK1-206ENST00000519259 A0A0D9SG42 100 aa1.74□□□□□ -2.13
SREK1-206ENST00000519259 USH2AO75445 5202 aa1.73□□□□□ -2.13
SREK1-206ENST00000519259 LCE2CQ5TA81 110 aa1.73□□□□□ -2.13
SREK1-206ENST00000519259 TENM3Q9P273 2699 aa1.73□□□□□ -2.13
SREK1-206ENST00000519259 VPS13CQ709C8 3753 aa1.73□□□□□ -2.13
SREK1-206ENST00000519259 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
SREK1-206ENST00000519259 LORP23490 312 aaPredicted RBP1.73□□□□□ -2.13
SREK1-206ENST00000519259 ZANQ9Y493 2812 aa1.72□□□□□ -2.13
SREK1-206ENST00000519259 NEBP20929 6669 aa1.72□□□□□ -2.13
SREK1-206ENST00000519259 PRAC1Q96KF2 57 aa1.71□□□□□ -2.14
SREK1-206ENST00000519259 SPRR2GQ9BYE4 73 aa1.71□□□□□ -2.14
SREK1-206ENST00000519259 DNAH6Q9C0G6 4158 aa1.71□□□□□ -2.14
SREK1-206ENST00000519259 COL7A1Q02388 2944 aa1.7□□□□□ -2.14
SREK1-206ENST00000519259 CSMD1Q96PZ7 3565 aa1.7□□□□□ -2.14
SREK1-206ENST00000519259 ROMO1P60602 79 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 P0C880 135 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 CRCT1Q9UGL9 99 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 MT3P25713 68 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 ANK2Q01484 3957 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 CSMD2Q7Z408 3487 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 LPAP08519 4548 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP19-2Q3LHN2 52 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 CUBNO60494 3623 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP3-3Q9BYR6 98 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP9-6A0A140TA67 174 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 MT1FP04733 61 aa1.69□□□□□ -2.14
SREK1-206ENST00000519259 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
SREK1-206ENST00000519259 PKD1P98161 4303 aa1.67□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP9-8Q9BYQ0 159 aa1.67□□□□□ -2.14
SREK1-206ENST00000519259 DNAH7Q8WXX0 4024 aa1.66□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP9-2Q9BYQ4 174 aa1.66□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP19-6Q3LI70 58 aa1.66□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP3-2Q9BYR7 98 aa1.65□□□□□ -2.14
SREK1-206ENST00000519259 TENM1Q9UKZ4 2725 aa1.65□□□□□ -2.14
SREK1-206ENST00000519259 KRTAP9-3Q9BYQ3 159 aa1.65□□□□□ -2.15
SREK1-206ENST00000519259 KRTAP10-5P60370 271 aa1.64□□□□□ -2.15
SREK1-206ENST00000519259 TGP01266 2768 aa1.64□□□□□ -2.15
SREK1-206ENST00000519259 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
SREK1-206ENST00000519259 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
SREK1-206ENST00000519259 A8MU10 97 aa1.61□□□□□ -2.15
SREK1-206ENST00000519259 FSIP2Q5CZC0 6907 aa1.61□□□□□ -2.15
SREK1-206ENST00000519259 INE1O15225 51 aa1.61□□□□□ -2.15
SREK1-206ENST00000519259 KRTAP19-1Q8IUB9 90 aa1.61□□□□□ -2.15
SREK1-206ENST00000519259 KRTAP12-2P59991 146 aa1.61□□□□□ -2.15
SREK1-206ENST00000519259 KRTAP12-1P59990 96 aa1.6□□□□□ -2.15
SREK1-206ENST00000519259 MT1BP07438 61 aa1.6□□□□□ -2.15
SREK1-206ENST00000519259 KRTAP6-3Q3LI67 103 aa1.59□□□□□ -2.15
SREK1-206ENST00000519259 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.15
SREK1-206ENST00000519259 ZNF469Q96JG9 3925 aaPredicted RBP1.59□□□□□ -2.16
SREK1-206ENST00000519259 LCE2BO14633 110 aa1.58□□□□□ -2.16
SREK1-206ENST00000519259 KRTAP10-12P60413 245 aa1.57□□□□□ -2.16
SREK1-206ENST00000519259 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
SREK1-206ENST00000519259 SYNE2Q8WXH0 6885 aaKnown RBP1.55□□□□□ -2.16
SREK1-206ENST00000519259 SSPOA2VEC9 5147 aa1.54□□□□□ -2.16
SREK1-206ENST00000519259 TNXBP22105 4242 aa1.54□□□□□ -2.16
SREK1-206ENST00000519259 PRKDCP78527 4128 aaKnown RBP1.53□□□□□ -2.16
SREK1-206ENST00000519259 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.16
SREK1-206ENST00000519259 HECTD4Q9Y4D8 3996 aa1.53□□□□□ -2.16
SREK1-206ENST00000519259 KRTAP9-7A8MTY7 169 aa1.52□□□□□ -2.17
SREK1-206ENST00000519259 VPS13BQ7Z7G8 4022 aa1.5□□□□□ -2.17
SREK1-206ENST00000519259 MUC2Q02817 5179 aa1.5□□□□□ -2.17
SREK1-206ENST00000519259 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
SREK1-206ENST00000519259 CMYA5Q8N3K9 4069 aa1.49□□□□□ -2.17
SREK1-206ENST00000519259 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.49□□□□□ -2.17
SREK1-206ENST00000519259 MT1GP13640 62 aa1.49□□□□□ -2.17
SREK1-206ENST00000519259 KRTAP12-3P60328 96 aa1.49□□□□□ -2.17
SREK1-206ENST00000519259 SPRR2FQ96RM1 72 aa1.49□□□□□ -2.17
SREK1-206ENST00000519259 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
SREK1-206ENST00000519259 MT1XP80297 61 aa1.48□□□□□ -2.17
SREK1-206ENST00000519259 SPRR2EP22531 72 aa1.48□□□□□ -2.17
SREK1-206ENST00000519259 SPRR2BP35325 72 aa1.48□□□□□ -2.17
SREK1-206ENST00000519259 SPRR2AP35326 72 aa1.48□□□□□ -2.17
SREK1-206ENST00000519259 KRTAP15-1Q3LI76 137 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms