RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 MT1FP04733 61 aa10.82□□□□□ -0.68
NKX6-3-201ENST00000518699 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
NKX6-3-201ENST00000518699 SPANXA2-OT1Q8N9U9 137 aa10.79□□□□□ -0.68
NKX6-3-201ENST00000518699 NDUFC1O43677 76 aa10.77□□□□□ -0.68
NKX6-3-201ENST00000518699 KRTAP9-2Q9BYQ4 174 aa10.77□□□□□ -0.68
NKX6-3-201ENST00000518699 KRTAP10-10P60014 251 aa10.75□□□□□ -0.69
NKX6-3-201ENST00000518699 ACYP2P14621 99 aa10.72□□□□□ -0.69
NKX6-3-201ENST00000518699 CYSTM1Q9H1C7 97 aa10.68□□□□□ -0.7
NKX6-3-201ENST00000518699 H7BZZ5 65 aa10.66□□□□□ -0.7
NKX6-3-201ENST00000518699 KRTAP9-3Q9BYQ3 159 aa10.63□□□□□ -0.71
NKX6-3-201ENST00000518699 H0YAA0 97 aa10.59□□□□□ -0.71
NKX6-3-201ENST00000518699 CCDC179H3BU77 68 aa10.59□□□□□ -0.71
NKX6-3-201ENST00000518699 CHKB-CPT1BH3BT56 60 aa10.52□□□□□ -0.73
NKX6-3-201ENST00000518699 SPTSSBQ8NFR3 76 aa10.5□□□□□ -0.73
NKX6-3-201ENST00000518699 LCE2BO14633 110 aa10.45□□□□□ -0.74
NKX6-3-201ENST00000518699 COA5Q86WW8 74 aa10.43□□□□□ -0.74
NKX6-3-201ENST00000518699 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
NKX6-3-201ENST00000518699 CRIPTQ9P021 101 aa10.38□□□□□ -0.75
NKX6-3-201ENST00000518699 FSIP2Q5CZC0 6907 aa10.38□□□□□ -0.75
NKX6-3-201ENST00000518699 USH2AO75445 5202 aa10.37□□□□□ -0.75
NKX6-3-201ENST00000518699 KRTAP19-1Q8IUB9 90 aa10.37□□□□□ -0.75
NKX6-3-201ENST00000518699 ATP5EP56381 51 aaPredicted RBP10.35□□□□□ -0.75
NKX6-3-201ENST00000518699 SPRR2GQ9BYE4 73 aa10.35□□□□□ -0.75
NKX6-3-201ENST00000518699 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
NKX6-3-201ENST00000518699 P0C880 135 aa10.27□□□□□ -0.76
NKX6-3-201ENST00000518699 TMEM258P61165 79 aa10.27□□□□□ -0.76
NKX6-3-201ENST00000518699 CRCT1Q9UGL9 99 aa10.27□□□□□ -0.76
NKX6-3-201ENST00000518699 KRTAP9-6A0A140TA67 174 aa10.22□□□□□ -0.77
NKX6-3-201ENST00000518699 KRTAP19-8Q3LI54 63 aa10.19□□□□□ -0.78
NKX6-3-201ENST00000518699 SSPOA2VEC9 5147 aa10.14□□□□□ -0.79
NKX6-3-201ENST00000518699 R4GN34 69 aa10.13□□□□□ -0.79
NKX6-3-201ENST00000518699 Q5VV11 94 aa10.11□□□□□ -0.79
NKX6-3-201ENST00000518699 MT1BP07438 61 aa10.1□□□□□ -0.79
NKX6-3-201ENST00000518699 M0QZ58 72 aa10.07□□□□□ -0.8
NKX6-3-201ENST00000518699 PCP4P48539 62 aa10.02□□□□□ -0.8
NKX6-3-201ENST00000518699 KRTAP19-6Q3LI70 58 aa10.01□□□□□ -0.81
NKX6-3-201ENST00000518699 SEC61GP60059 68 aa10.01□□□□□ -0.81
NKX6-3-201ENST00000518699 SERP1Q9Y6X1 66 aa9.97□□□□□ -0.81
NKX6-3-201ENST00000518699 A0A1B0GU69 56 aa9.88□□□□□ -0.83
NKX6-3-201ENST00000518699 LINC01554Q52M75 96 aa9.86□□□□□ -0.83
NKX6-3-201ENST00000518699 FCGBPQ9Y6R7 5405 aaPredicted RBP9.85□□□□□ -0.83
NKX6-3-201ENST00000518699 KRTAP13-4Q3LI77 160 aa9.84□□□□□ -0.83
NKX6-3-201ENST00000518699 LINC01558Q9Y6Z2 57 aa9.8□□□□□ -0.84
NKX6-3-201ENST00000518699 A0A1B0GU33 70 aa9.78□□□□□ -0.84
NKX6-3-201ENST00000518699 PLAC4Q8WY50 150 aa9.78□□□□□ -0.84
NKX6-3-201ENST00000518699 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
NKX6-3-201ENST00000518699 A6NN06 94 aa9.75□□□□□ -0.85
NKX6-3-201ENST00000518699 KRTAP10-5P60370 271 aa9.75□□□□□ -0.85
NKX6-3-201ENST00000518699 SPATA8Q6RVD6 105 aa9.66□□□□□ -0.86
NKX6-3-201ENST00000518699 MT1XP80297 61 aa9.61□□□□□ -0.87
NKX6-3-201ENST00000518699 PRO2289Q9P1D8 64 aa9.6□□□□□ -0.87
NKX6-3-201ENST00000518699 V9GYY9 64 aa9.59□□□□□ -0.87
NKX6-3-201ENST00000518699 RPS28P62857 69 aaKnown RBP9.58□□□□□ -0.88
NKX6-3-201ENST00000518699 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.56□□□□□ -0.88
NKX6-3-201ENST00000518699 SMIM26A0A096LP01 95 aa9.55□□□□□ -0.88
NKX6-3-201ENST00000518699 A0A0D9SG42 100 aa9.55□□□□□ -0.88
NKX6-3-201ENST00000518699 Q1T7F1 81 aa9.55□□□□□ -0.88
NKX6-3-201ENST00000518699 MACF1Q9UPN3 7388 aaKnown RBP9.52□□□□□ -0.89
NKX6-3-201ENST00000518699 UQCR11O14957 56 aa9.44□□□□□ -0.9
NKX6-3-201ENST00000518699 KRTAP12-1P59990 96 aa9.43□□□□□ -0.9
NKX6-3-201ENST00000518699 A8MU10 97 aa9.42□□□□□ -0.9
NKX6-3-201ENST00000518699 PSPHP1O15172 72 aa9.4□□□□□ -0.9
NKX6-3-201ENST00000518699 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
NKX6-3-201ENST00000518699 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
NKX6-3-201ENST00000518699 KRTAP12-2P59991 146 aa9.36□□□□□ -0.91
NKX6-3-201ENST00000518699 SYNE2Q8WXH0 6885 aaKnown RBP9.29□□□□□ -0.92
NKX6-3-201ENST00000518699 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
NKX6-3-201ENST00000518699 KRTAP9-7A8MTY7 169 aa9.25□□□□□ -0.93
NKX6-3-201ENST00000518699 KRTAP10-7P60409 375 aaPredicted RBP9.15□□□□□ -0.94
NKX6-3-201ENST00000518699 A6NED7 52 aa9.13□□□□□ -0.95
NKX6-3-201ENST00000518699 KRTAP10-12P60413 245 aa9.13□□□□□ -0.95
NKX6-3-201ENST00000518699 KRTAP6-3Q3LI67 103 aa9.12□□□□□ -0.95
NKX6-3-201ENST00000518699 KMT2DO14686 5537 aa9.04□□□□□ -0.96
NKX6-3-201ENST00000518699 K7ERS5 55 aa8.99□□□□□ -0.97
NKX6-3-201ENST00000518699 KRTAP5-9P26371 169 aa8.98□□□□□ -0.97
NKX6-3-201ENST00000518699 KRTAP4-8A0A0G2JLE6 195 aa8.96□□□□□ -0.98
NKX6-3-201ENST00000518699 KRTAP4-8Q9BYQ9 185 aa8.96□□□□□ -0.98
NKX6-3-201ENST00000518699 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.98
NKX6-3-201ENST00000518699 KRTAP8-1Q8IUC2 63 aa8.95□□□□□ -0.98
NKX6-3-201ENST00000518699 CDC42SE1Q9NRR8 79 aa8.88□□□□□ -0.99
NKX6-3-201ENST00000518699 TNP1P09430 55 aa8.82□□□□□ -1
NKX6-3-201ENST00000518699 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
NKX6-3-201ENST00000518699 MUC12Q9UKN1 5478 aa8.76□□□□□ -1.01
NKX6-3-201ENST00000518699 NEBP20929 6669 aa8.73□□□□□ -1.01
NKX6-3-201ENST00000518699 KRTAP25-1Q3LHN0 102 aa8.62□□□□□ -1.03
NKX6-3-201ENST00000518699 MDN1Q9NU22 5596 aa8.6□□□□□ -1.03
NKX6-3-201ENST00000518699 KRTAP19-7Q3SYF9 63 aa8.59□□□□□ -1.03
NKX6-3-201ENST00000518699 LCE3AQ5TA76 89 aa8.58□□□□□ -1.04
NKX6-3-201ENST00000518699 SPRR2EP22531 72 aa8.53□□□□□ -1.04
NKX6-3-201ENST00000518699 SPRR2BP35325 72 aa8.53□□□□□ -1.04
NKX6-3-201ENST00000518699 SPRR2AP35326 72 aa8.53□□□□□ -1.04
NKX6-3-201ENST00000518699 LCE1AQ5T7P2 110 aa8.51□□□□□ -1.05
NKX6-3-201ENST00000518699 ROMO1P60602 79 aa8.49□□□□□ -1.05
NKX6-3-201ENST00000518699 KRTAP19-5Q3LI72 72 aa8.48□□□□□ -1.05
NKX6-3-201ENST00000518699 MT1EP04732 61 aa8.48□□□□□ -1.05
NKX6-3-201ENST00000518699 BRK1Q8WUW1 75 aa8.48□□□□□ -1.05
NKX6-3-201ENST00000518699 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
NKX6-3-201ENST00000518699 KRTAP19-3Q7Z4W3 81 aa8.29□□□□□ -1.08
NKX6-3-201ENST00000518699 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
NKX6-3-201ENST00000518699 SPRR2DP22532 72 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms