RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.75
CSGALNACT1-206ENST00000518542 MRPL34Q9BQ48 92 aaKnown RBP4.15□□□□□ -1.75
CSGALNACT1-206ENST00000518542 NDUFS5O43920 106 aa4.14□□□□□ -1.75
CSGALNACT1-206ENST00000518542 Q75L30 129 aa4.14□□□□□ -1.75
CSGALNACT1-206ENST00000518542 ZCCHC13Q8WW36 166 aaKnown RBP4.14□□□□□ -1.75
CSGALNACT1-206ENST00000518542 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
CSGALNACT1-206ENST00000518542 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
CSGALNACT1-206ENST00000518542 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
CSGALNACT1-206ENST00000518542 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
CSGALNACT1-206ENST00000518542 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
CSGALNACT1-206ENST00000518542 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
CSGALNACT1-206ENST00000518542 SMIM26A0A096LP01 95 aa4.11□□□□□ -1.75
CSGALNACT1-206ENST00000518542 A8MUU9 505 aa4.11□□□□□ -1.75
CSGALNACT1-206ENST00000518542 SPANXA2-OT1Q8N9U9 137 aa4.11□□□□□ -1.75
CSGALNACT1-206ENST00000518542 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
CSGALNACT1-206ENST00000518542 FSIP2Q5CZC0 6907 aa4.09□□□□□ -1.75
CSGALNACT1-206ENST00000518542 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
CSGALNACT1-206ENST00000518542 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
CSGALNACT1-206ENST00000518542 Q8N9P0 234 aaPredicted RBP4.06□□□□□ -1.76
CSGALNACT1-206ENST00000518542 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
CSGALNACT1-206ENST00000518542 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
CSGALNACT1-206ENST00000518542 V9GYY9 64 aa4.03□□□□□ -1.76
CSGALNACT1-206ENST00000518542 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
CSGALNACT1-206ENST00000518542 Q5W150 140 aa3.97□□□□□ -1.77
CSGALNACT1-206ENST00000518542 COX6B2Q6YFQ2 88 aa3.97□□□□□ -1.77
CSGALNACT1-206ENST00000518542 MPLKIPQ8TAP9 179 aa3.97□□□□□ -1.77
CSGALNACT1-206ENST00000518542 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
CSGALNACT1-206ENST00000518542 ACYP2P14621 99 aa3.96□□□□□ -1.78
CSGALNACT1-206ENST00000518542 SPINK7P58062 85 aa3.96□□□□□ -1.78
CSGALNACT1-206ENST00000518542 C4orf26Q17RF5 130 aa3.96□□□□□ -1.78
CSGALNACT1-206ENST00000518542 Q1T7F1 81 aa3.96□□□□□ -1.78
CSGALNACT1-206ENST00000518542 COA5Q86WW8 74 aa3.96□□□□□ -1.78
CSGALNACT1-206ENST00000518542 RBM12B-AS1Q9P1G2 102 aa3.95□□□□□ -1.78
CSGALNACT1-206ENST00000518542 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
CSGALNACT1-206ENST00000518542 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
CSGALNACT1-206ENST00000518542 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
CSGALNACT1-206ENST00000518542 IGKV2D-30A0A075B6S6 120 aa3.92□□□□□ -1.78
CSGALNACT1-206ENST00000518542 HRES1P13985 223 aa3.92□□□□□ -1.78
CSGALNACT1-206ENST00000518542 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
CSGALNACT1-206ENST00000518542 DMAC1Q96GE9 116 aa3.91□□□□□ -1.78
CSGALNACT1-206ENST00000518542 A8MUN3 132 aa3.89□□□□□ -1.79
CSGALNACT1-206ENST00000518542 MT1HP80294 61 aa3.87□□□□□ -1.79
CSGALNACT1-206ENST00000518542 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
CSGALNACT1-206ENST00000518542 M0R2T5 61 aa3.86□□□□□ -1.79
CSGALNACT1-206ENST00000518542 PSPHP1O15172 72 aa3.86□□□□□ -1.79
CSGALNACT1-206ENST00000518542 SPTSSBQ8NFR3 76 aa3.86□□□□□ -1.79
CSGALNACT1-206ENST00000518542 PRO0628Q9UI54 55 aa3.86□□□□□ -1.79
CSGALNACT1-206ENST00000518542 LINC01558Q9Y6Z2 57 aa3.86□□□□□ -1.79
CSGALNACT1-206ENST00000518542 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
CSGALNACT1-206ENST00000518542 Q5VV11 94 aa3.81□□□□□ -1.8
CSGALNACT1-206ENST00000518542 A6NED7 52 aa3.8□□□□□ -1.8
CSGALNACT1-206ENST00000518542 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
CSGALNACT1-206ENST00000518542 A0A1B0GU69 56 aa3.79□□□□□ -1.8
CSGALNACT1-206ENST00000518542 SEC61GP60059 68 aa3.79□□□□□ -1.8
CSGALNACT1-206ENST00000518542 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
CSGALNACT1-206ENST00000518542 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
CSGALNACT1-206ENST00000518542 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
CSGALNACT1-206ENST00000518542 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
CSGALNACT1-206ENST00000518542 S4R3F8 94 aa3.73□□□□□ -1.81
CSGALNACT1-206ENST00000518542 UQCR11O14957 56 aa3.71□□□□□ -1.82
CSGALNACT1-206ENST00000518542 LCA10Q71F78 164 aa3.69□□□□□ -1.82
CSGALNACT1-206ENST00000518542 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
CSGALNACT1-206ENST00000518542 CSAG1Q6PB30 78 aa3.68□□□□□ -1.82
CSGALNACT1-206ENST00000518542 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
CSGALNACT1-206ENST00000518542 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
CSGALNACT1-206ENST00000518542 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
CSGALNACT1-206ENST00000518542 MT2AP02795 61 aa3.65□□□□□ -1.83
CSGALNACT1-206ENST00000518542 KRTAP10-10P60014 251 aa3.65□□□□□ -1.83
CSGALNACT1-206ENST00000518542 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
CSGALNACT1-206ENST00000518542 USH2AO75445 5202 aa3.63□□□□□ -1.83
CSGALNACT1-206ENST00000518542 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
CSGALNACT1-206ENST00000518542 MT1FP04733 61 aa3.62□□□□□ -1.83
CSGALNACT1-206ENST00000518542 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
CSGALNACT1-206ENST00000518542 A0A1B0GU33 70 aa3.6□□□□□ -1.83
CSGALNACT1-206ENST00000518542 K7ERS5 55 aa3.58□□□□□ -1.84
CSGALNACT1-206ENST00000518542 A8MU10 97 aa3.57□□□□□ -1.84
CSGALNACT1-206ENST00000518542 A6NN06 94 aa3.56□□□□□ -1.84
CSGALNACT1-206ENST00000518542 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
CSGALNACT1-206ENST00000518542 H0YAA0 97 aa3.55□□□□□ -1.84
CSGALNACT1-206ENST00000518542 ADM2Q7Z4H4 148 aa3.51□□□□□ -1.85
CSGALNACT1-206ENST00000518542 CRIPTQ9P021 101 aa3.51□□□□□ -1.85
CSGALNACT1-206ENST00000518542 NEBP20929 6669 aa3.46□□□□□ -1.85
CSGALNACT1-206ENST00000518542 SPRR2GQ9BYE4 73 aa3.46□□□□□ -1.86
CSGALNACT1-206ENST00000518542 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
CSGALNACT1-206ENST00000518542 M0QZ58 72 aa3.45□□□□□ -1.86
CSGALNACT1-206ENST00000518542 P0C880 135 aa3.44□□□□□ -1.86
CSGALNACT1-206ENST00000518542 R4GN34 69 aa3.43□□□□□ -1.86
CSGALNACT1-206ENST00000518542 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
CSGALNACT1-206ENST00000518542 KRTAP19-8Q3LI54 63 aa3.41□□□□□ -1.86
CSGALNACT1-206ENST00000518542 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
CSGALNACT1-206ENST00000518542 A0A0D9SG42 100 aa3.4□□□□□ -1.87
CSGALNACT1-206ENST00000518542 MT3P25713 68 aa3.4□□□□□ -1.87
CSGALNACT1-206ENST00000518542 MT1BP07438 61 aa3.37□□□□□ -1.87
CSGALNACT1-206ENST00000518542 ROMO1P60602 79 aa3.36□□□□□ -1.87
CSGALNACT1-206ENST00000518542 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
CSGALNACT1-206ENST00000518542 LINC01554Q52M75 96 aa3.34□□□□□ -1.87
CSGALNACT1-206ENST00000518542 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
CSGALNACT1-206ENST00000518542 PLAC4Q8WY50 150 aa3.34□□□□□ -1.87
CSGALNACT1-206ENST00000518542 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
CSGALNACT1-206ENST00000518542 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms