RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 FAM236AA0A1B0GUQ0 79 aa10.23□□□□□ -0.77
VEGFA-217ENST00000518538 FAM236BA0A1B0GV22 79 aa10.23□□□□□ -0.77
VEGFA-217ENST00000518538 SMIM20Q8N5G0 67 aa10.2□□□□□ -0.78
VEGFA-217ENST00000518538 TRAV7A0A075B6U4 112 aa10.15□□□□□ -0.78
VEGFA-217ENST00000518538 USH2AO75445 5202 aa10.14□□□□□ -0.79
VEGFA-217ENST00000518538 NDUFC1O43677 76 aa10.12□□□□□ -0.79
VEGFA-217ENST00000518538 DMAC1Q96GE9 116 aa10.05□□□□□ -0.8
VEGFA-217ENST00000518538 SSPOA2VEC9 5147 aa9.99□□□□□ -0.81
VEGFA-217ENST00000518538 KRTAP19-1Q8IUB9 90 aa9.99□□□□□ -0.81
VEGFA-217ENST00000518538 H0YAA0 97 aa9.96□□□□□ -0.82
VEGFA-217ENST00000518538 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
VEGFA-217ENST00000518538 SPRR2GQ9BYE4 73 aa9.93□□□□□ -0.82
VEGFA-217ENST00000518538 SNURFQ9Y675 71 aa9.91□□□□□ -0.82
VEGFA-217ENST00000518538 KRTAP19-6Q3LI70 58 aa9.89□□□□□ -0.83
VEGFA-217ENST00000518538 CRIPTQ9P021 101 aa9.88□□□□□ -0.83
VEGFA-217ENST00000518538 ACYP2P14621 99 aa9.86□□□□□ -0.83
VEGFA-217ENST00000518538 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
VEGFA-217ENST00000518538 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
VEGFA-217ENST00000518538 KRTAP19-8Q3LI54 63 aa9.82□□□□□ -0.84
VEGFA-217ENST00000518538 Q5VV11 94 aa9.79□□□□□ -0.84
VEGFA-217ENST00000518538 MT1BP07438 61 aa9.77□□□□□ -0.85
VEGFA-217ENST00000518538 SPANXA2-OT1Q8N9U9 137 aa9.77□□□□□ -0.85
VEGFA-217ENST00000518538 FCGBPQ9Y6R7 5405 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-217ENST00000518538 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.71□□□□□ -0.86
VEGFA-217ENST00000518538 COX7CP15954 63 aa9.7□□□□□ -0.86
VEGFA-217ENST00000518538 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
VEGFA-217ENST00000518538 CHKB-CPT1BH3BT56 60 aa9.67□□□□□ -0.86
VEGFA-217ENST00000518538 P0C880 135 aa9.65□□□□□ -0.86
VEGFA-217ENST00000518538 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
VEGFA-217ENST00000518538 R4GN34 69 aa9.57□□□□□ -0.88
VEGFA-217ENST00000518538 A6NN06 94 aa9.54□□□□□ -0.88
VEGFA-217ENST00000518538 M0QZ58 72 aa9.51□□□□□ -0.89
VEGFA-217ENST00000518538 ANAPC13Q9BS18 74 aa9.51□□□□□ -0.89
VEGFA-217ENST00000518538 KRTAP9-7A8MTY7 169 aa9.5□□□□□ -0.89
VEGFA-217ENST00000518538 H7BZZ5 65 aa9.49□□□□□ -0.89
VEGFA-217ENST00000518538 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
VEGFA-217ENST00000518538 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
VEGFA-217ENST00000518538 COA5Q86WW8 74 aa9.46□□□□□ -0.9
VEGFA-217ENST00000518538 PLAC4Q8WY50 150 aa9.37□□□□□ -0.91
VEGFA-217ENST00000518538 MACF1Q9UPN3 7388 aaKnown RBP9.35□□□□□ -0.91
VEGFA-217ENST00000518538 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
VEGFA-217ENST00000518538 CCDC179H3BU77 68 aa9.3□□□□□ -0.92
VEGFA-217ENST00000518538 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
VEGFA-217ENST00000518538 MT1XP80297 61 aa9.23□□□□□ -0.93
VEGFA-217ENST00000518538 SEC61GP60059 68 aa9.19□□□□□ -0.94
VEGFA-217ENST00000518538 KRTAP6-3Q3LI67 103 aa9.19□□□□□ -0.94
VEGFA-217ENST00000518538 SYNE2Q8WXH0 6885 aaKnown RBP9.17□□□□□ -0.94
VEGFA-217ENST00000518538 SERP1Q9Y6X1 66 aa9.16□□□□□ -0.94
VEGFA-217ENST00000518538 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
VEGFA-217ENST00000518538 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-217ENST00000518538 A0A1B0GU33 70 aa9□□□□□ -0.97
VEGFA-217ENST00000518538 TMEM258P61165 79 aa8.99□□□□□ -0.97
VEGFA-217ENST00000518538 A0A1B0GU69 56 aa8.97□□□□□ -0.97
VEGFA-217ENST00000518538 KRTAP12-2P59991 146 aa8.96□□□□□ -0.98
VEGFA-217ENST00000518538 SPATA8Q6RVD6 105 aa8.93□□□□□ -0.98
VEGFA-217ENST00000518538 KRTAP5-9P26371 169 aa8.9□□□□□ -0.98
VEGFA-217ENST00000518538 A0A0D9SG42 100 aa8.89□□□□□ -0.99
VEGFA-217ENST00000518538 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
VEGFA-217ENST00000518538 KRTAP10-7P60409 375 aaPredicted RBP8.81□□□□□ -1
VEGFA-217ENST00000518538 PRR15LQ9BU68 103 aa8.8□□□□□ -1
VEGFA-217ENST00000518538 KRTAP10-12P60413 245 aa8.78□□□□□ -1
VEGFA-217ENST00000518538 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
VEGFA-217ENST00000518538 KRTAP8-1Q8IUC2 63 aa8.77□□□□□ -1.01
VEGFA-217ENST00000518538 SMIM26A0A096LP01 95 aa8.75□□□□□ -1.01
VEGFA-217ENST00000518538 KRTAP12-1P59990 96 aa8.74□□□□□ -1.01
VEGFA-217ENST00000518538 SPINT4Q6UDR6 99 aa8.74□□□□□ -1.01
VEGFA-217ENST00000518538 KMT2DO14686 5537 aa8.73□□□□□ -1.01
VEGFA-217ENST00000518538 KRTAP4-8A0A0G2JLE6 195 aa8.72□□□□□ -1.01
VEGFA-217ENST00000518538 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
VEGFA-217ENST00000518538 SPRR2FQ96RM1 72 aa8.7□□□□□ -1.02
VEGFA-217ENST00000518538 MUC12Q9UKN1 5478 aa8.67□□□□□ -1.02
VEGFA-217ENST00000518538 A8MU10 97 aa8.66□□□□□ -1.02
VEGFA-217ENST00000518538 NEBP20929 6669 aa8.6□□□□□ -1.03
VEGFA-217ENST00000518538 UQCR11O14957 56 aa8.51□□□□□ -1.05
VEGFA-217ENST00000518538 SPRR2EP22531 72 aa8.5□□□□□ -1.05
VEGFA-217ENST00000518538 SPRR2BP35325 72 aa8.5□□□□□ -1.05
VEGFA-217ENST00000518538 SPRR2AP35326 72 aa8.5□□□□□ -1.05
VEGFA-217ENST00000518538 MDN1Q9NU22 5596 aa8.47□□□□□ -1.05
VEGFA-217ENST00000518538 V9GYY9 64 aa8.46□□□□□ -1.06
VEGFA-217ENST00000518538 LCE1AQ5T7P2 110 aa8.43□□□□□ -1.06
VEGFA-217ENST00000518538 Q1T7F1 81 aa8.41□□□□□ -1.06
VEGFA-217ENST00000518538 PCP4P48539 62 aa8.4□□□□□ -1.06
VEGFA-217ENST00000518538 KRTAP20-1Q3LI63 56 aa8.36□□□□□ -1.07
VEGFA-217ENST00000518538 PSPHP1O15172 72 aa8.34□□□□□ -1.07
VEGFA-217ENST00000518538 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
VEGFA-217ENST00000518538 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
VEGFA-217ENST00000518538 KRTAP19-7Q3SYF9 63 aa8.25□□□□□ -1.09
VEGFA-217ENST00000518538 TNP1P09430 55 aa8.24□□□□□ -1.09
VEGFA-217ENST00000518538 KRTAP2-3P0C7H8 128 aa8.23□□□□□ -1.09
VEGFA-217ENST00000518538 RPS28P62857 69 aaKnown RBP8.23□□□□□ -1.09
VEGFA-217ENST00000518538 KRTAP2-4Q9BYR9 128 aa8.23□□□□□ -1.09
VEGFA-217ENST00000518538 SPRR2DP22532 72 aa8.21□□□□□ -1.1
VEGFA-217ENST00000518538 MT1EP04732 61 aa8.16□□□□□ -1.1
VEGFA-217ENST00000518538 K7ERS5 55 aa8.13□□□□□ -1.11
VEGFA-217ENST00000518538 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
VEGFA-217ENST00000518538 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
VEGFA-217ENST00000518538 A6NED7 52 aa8.08□□□□□ -1.12
VEGFA-217ENST00000518538 KRTAP19-3Q7Z4W3 81 aa8.04□□□□□ -1.12
VEGFA-217ENST00000518538 LCE5AQ5TCM9 118 aa8.02□□□□□ -1.13
VEGFA-217ENST00000518538 KRTAP2-2Q9BYT5 123 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms