RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
PABPC1-205ENST00000518196 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
PABPC1-205ENST00000518196 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
PABPC1-205ENST00000518196 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
PABPC1-205ENST00000518196 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
PABPC1-205ENST00000518196 MP68P56378 58 aa6.57□□□□□ -1.36
PABPC1-205ENST00000518196 C5orf47Q569G3 176 aa6.57□□□□□ -1.36
PABPC1-205ENST00000518196 FAT4Q6V0I7 4981 aa6.56□□□□□ -1.36
PABPC1-205ENST00000518196 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
PABPC1-205ENST00000518196 CYP4F30PQ9H0H9 118 aa6.54□□□□□ -1.36
PABPC1-205ENST00000518196 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
PABPC1-205ENST00000518196 LINC00208Q96KT6 92 aa6.53□□□□□ -1.36
PABPC1-205ENST00000518196 H3BPC8 53 aa6.52□□□□□ -1.37
PABPC1-205ENST00000518196 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
PABPC1-205ENST00000518196 MT1HP80294 61 aa6.48□□□□□ -1.37
PABPC1-205ENST00000518196 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-205ENST00000518196 M0R2T5 61 aa6.45□□□□□ -1.38
PABPC1-205ENST00000518196 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
PABPC1-205ENST00000518196 SERP2Q8N6R1 65 aa6.44□□□□□ -1.38
PABPC1-205ENST00000518196 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
PABPC1-205ENST00000518196 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
PABPC1-205ENST00000518196 COX7CP15954 63 aa6.34□□□□□ -1.39
PABPC1-205ENST00000518196 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
PABPC1-205ENST00000518196 A8MUN3 132 aa6.33□□□□□ -1.4
PABPC1-205ENST00000518196 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
PABPC1-205ENST00000518196 S4R3F8 94 aa6.32□□□□□ -1.4
PABPC1-205ENST00000518196 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
PABPC1-205ENST00000518196 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
PABPC1-205ENST00000518196 LCA10Q71F78 164 aa6.25□□□□□ -1.41
PABPC1-205ENST00000518196 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
PABPC1-205ENST00000518196 CSAG1Q6PB30 78 aa6.23□□□□□ -1.41
PABPC1-205ENST00000518196 NDUFC1O43677 76 aa6.22□□□□□ -1.41
PABPC1-205ENST00000518196 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
PABPC1-205ENST00000518196 ACYP2P14621 99 aa6.21□□□□□ -1.42
PABPC1-205ENST00000518196 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
PABPC1-205ENST00000518196 CCDC179H3BU77 68 aa6.15□□□□□ -1.42
PABPC1-205ENST00000518196 H7BZZ5 65 aa6.14□□□□□ -1.43
PABPC1-205ENST00000518196 MT2AP02795 61 aa6.14□□□□□ -1.43
PABPC1-205ENST00000518196 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
PABPC1-205ENST00000518196 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
PABPC1-205ENST00000518196 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
PABPC1-205ENST00000518196 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
PABPC1-205ENST00000518196 MT1FP04733 61 aa6.08□□□□□ -1.44
PABPC1-205ENST00000518196 H0YAA0 97 aa6.02□□□□□ -1.45
PABPC1-205ENST00000518196 COA5Q86WW8 74 aa6.02□□□□□ -1.45
PABPC1-205ENST00000518196 ATP5EP56381 51 aaPredicted RBP6.01□□□□□ -1.45
PABPC1-205ENST00000518196 PRAC1Q96KF2 57 aa6□□□□□ -1.45
PABPC1-205ENST00000518196 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
PABPC1-205ENST00000518196 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
PABPC1-205ENST00000518196 TMEM258P61165 79 aa5.96□□□□□ -1.46
PABPC1-205ENST00000518196 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
PABPC1-205ENST00000518196 P0C880 135 aa5.86□□□□□ -1.47
PABPC1-205ENST00000518196 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
PABPC1-205ENST00000518196 SEC61GP60059 68 aa5.83□□□□□ -1.48
PABPC1-205ENST00000518196 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
PABPC1-205ENST00000518196 MT3P25713 68 aa5.81□□□□□ -1.48
PABPC1-205ENST00000518196 R4GN34 69 aa5.81□□□□□ -1.48
PABPC1-205ENST00000518196 SERP1Q9Y6X1 66 aa5.8□□□□□ -1.48
PABPC1-205ENST00000518196 M0QZ58 72 aa5.78□□□□□ -1.48
PABPC1-205ENST00000518196 Q5VV11 94 aa5.75□□□□□ -1.49
PABPC1-205ENST00000518196 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
PABPC1-205ENST00000518196 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
PABPC1-205ENST00000518196 A0A1B0GU69 56 aa5.72□□□□□ -1.49
PABPC1-205ENST00000518196 USH2AO75445 5202 aa5.69□□□□□ -1.5
PABPC1-205ENST00000518196 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
PABPC1-205ENST00000518196 MT1BP07438 61 aa5.68□□□□□ -1.5
PABPC1-205ENST00000518196 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
PABPC1-205ENST00000518196 LINC01554Q52M75 96 aa5.67□□□□□ -1.5
PABPC1-205ENST00000518196 A0A1B0GU33 70 aa5.66□□□□□ -1.5
PABPC1-205ENST00000518196 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
PABPC1-205ENST00000518196 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
PABPC1-205ENST00000518196 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
PABPC1-205ENST00000518196 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
PABPC1-205ENST00000518196 V9GYY9 64 aa5.61□□□□□ -1.51
PABPC1-205ENST00000518196 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
PABPC1-205ENST00000518196 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
PABPC1-205ENST00000518196 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
PABPC1-205ENST00000518196 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
PABPC1-205ENST00000518196 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
PABPC1-205ENST00000518196 A6NN06 94 aa5.55□□□□□ -1.52
PABPC1-205ENST00000518196 Q1T7F1 81 aa5.55□□□□□ -1.52
PABPC1-205ENST00000518196 A0A0D9SG42 100 aa5.52□□□□□ -1.53
PABPC1-205ENST00000518196 UQCR11O14957 56 aa5.49□□□□□ -1.53
PABPC1-205ENST00000518196 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
PABPC1-205ENST00000518196 PSPHP1O15172 72 aa5.48□□□□□ -1.53
PABPC1-205ENST00000518196 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
PABPC1-205ENST00000518196 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
PABPC1-205ENST00000518196 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-205ENST00000518196 A8MU10 97 aa5.42□□□□□ -1.54
PABPC1-205ENST00000518196 MT1XP80297 61 aa5.41□□□□□ -1.54
PABPC1-205ENST00000518196 KRTAP12-1P59990 96 aa5.4□□□□□ -1.54
PABPC1-205ENST00000518196 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.54
PABPC1-205ENST00000518196 MIR22HGQ0VDD5 57 aa5.39□□□□□ -1.55
PABPC1-205ENST00000518196 LCE1FQ5T754 118 aa5.38□□□□□ -1.55
PABPC1-205ENST00000518196 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
PABPC1-205ENST00000518196 A6NED7 52 aa5.33□□□□□ -1.56
PABPC1-205ENST00000518196 K7ERS5 55 aa5.26□□□□□ -1.57
PABPC1-205ENST00000518196 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
PABPC1-205ENST00000518196 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
PABPC1-205ENST00000518196 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms