RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 COX6B2Q6YFQ2 88 aa10.22□□□□□ -0.77
HOXA11-202ENST00000517402 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
HOXA11-202ENST00000517402 CDC42SE1Q9NRR8 79 aa10.15□□□□□ -0.79
HOXA11-202ENST00000517402 SPTSSBQ8NFR3 76 aa10.1□□□□□ -0.79
HOXA11-202ENST00000517402 J3QL48 77 aa10.02□□□□□ -0.81
HOXA11-202ENST00000517402 HERC1Q15751 4861 aa10.02□□□□□ -0.81
HOXA11-202ENST00000517402 SEC61GP60059 68 aa10□□□□□ -0.81
HOXA11-202ENST00000517402 UQCR11O14957 56 aa9.98□□□□□ -0.81
HOXA11-202ENST00000517402 PMAIP1Q13794 54 aa9.95□□□□□ -0.82
HOXA11-202ENST00000517402 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
HOXA11-202ENST00000517402 MIR22HGQ0VDD5 57 aa9.94□□□□□ -0.82
HOXA11-202ENST00000517402 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
HOXA11-202ENST00000517402 S4R3F8 94 aa9.9□□□□□ -0.82
HOXA11-202ENST00000517402 A6NN06 94 aa9.83□□□□□ -0.84
HOXA11-202ENST00000517402 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
HOXA11-202ENST00000517402 MUC17Q685J3 4493 aa9.82□□□□□ -0.84
HOXA11-202ENST00000517402 H0YAA0 97 aa9.81□□□□□ -0.84
HOXA11-202ENST00000517402 A0A1B0GU33 70 aa9.8□□□□□ -0.84
HOXA11-202ENST00000517402 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
HOXA11-202ENST00000517402 SEC61BP60468 96 aaKnown RBP9.76□□□□□ -0.85
HOXA11-202ENST00000517402 HMCN2Q8NDA2 5059 aa9.76□□□□□ -0.85
HOXA11-202ENST00000517402 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
HOXA11-202ENST00000517402 KRTAP10-6P60371 365 aaPredicted RBP9.73□□□□□ -0.85
HOXA11-202ENST00000517402 MUC2Q02817 5179 aa9.72□□□□□ -0.85
HOXA11-202ENST00000517402 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
HOXA11-202ENST00000517402 P0C880 135 aa9.63□□□□□ -0.87
HOXA11-202ENST00000517402 KTN1-AS1Q86SY8 53 aa9.63□□□□□ -0.87
HOXA11-202ENST00000517402 KRTAP13-4Q3LI77 160 aa9.6□□□□□ -0.87
HOXA11-202ENST00000517402 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
HOXA11-202ENST00000517402 ADM2Q7Z4H4 148 aa9.57□□□□□ -0.88
HOXA11-202ENST00000517402 KRTAP19-2Q3LHN2 52 aa9.48□□□□□ -0.89
HOXA11-202ENST00000517402 A0A0D9SG42 100 aa9.47□□□□□ -0.89
HOXA11-202ENST00000517402 UBR4Q5T4S7 5183 aa9.45□□□□□ -0.9
HOXA11-202ENST00000517402 PRAC1Q96KF2 57 aa9.41□□□□□ -0.9
HOXA11-202ENST00000517402 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
HOXA11-202ENST00000517402 K7ERS5 55 aa9.31□□□□□ -0.92
HOXA11-202ENST00000517402 FLGP20930 4061 aaPredicted RBP9.3□□□□□ -0.92
HOXA11-202ENST00000517402 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
HOXA11-202ENST00000517402 M0QZ58 72 aa9.23□□□□□ -0.93
HOXA11-202ENST00000517402 KRTAP12-2P59991 146 aa9.23□□□□□ -0.93
HOXA11-202ENST00000517402 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
HOXA11-202ENST00000517402 R4GN34 69 aa9.17□□□□□ -0.94
HOXA11-202ENST00000517402 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
HOXA11-202ENST00000517402 SPINT4Q6UDR6 99 aa9.16□□□□□ -0.94
HOXA11-202ENST00000517402 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
HOXA11-202ENST00000517402 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
HOXA11-202ENST00000517402 ROMO1P60602 79 aa9.07□□□□□ -0.96
HOXA11-202ENST00000517402 CRIPTQ9P021 101 aa9.05□□□□□ -0.96
HOXA11-202ENST00000517402 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
HOXA11-202ENST00000517402 MT1HP80294 61 aa8.88□□□□□ -0.99
HOXA11-202ENST00000517402 M0R2T5 61 aa8.85□□□□□ -0.99
HOXA11-202ENST00000517402 C10orf95Q9H7T3 257 aa8.81□□□□□ -1
HOXA11-202ENST00000517402 CAMK2N1Q7Z7J9 78 aa8.65□□□□□ -1.03
HOXA11-202ENST00000517402 MT2AP02795 61 aa8.63□□□□□ -1.03
HOXA11-202ENST00000517402 MT1FP04733 61 aa8.63□□□□□ -1.03
HOXA11-202ENST00000517402 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
HOXA11-202ENST00000517402 KRTAP9-8Q9BYQ0 159 aa8.6□□□□□ -1.03
HOXA11-202ENST00000517402 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
HOXA11-202ENST00000517402 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
HOXA11-202ENST00000517402 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
HOXA11-202ENST00000517402 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
HOXA11-202ENST00000517402 KRTAP19-8Q3LI54 63 aa8.27□□□□□ -1.09
HOXA11-202ENST00000517402 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
HOXA11-202ENST00000517402 TNP1P09430 55 aa8.23□□□□□ -1.09
HOXA11-202ENST00000517402 MT1BP07438 61 aa8.23□□□□□ -1.09
HOXA11-202ENST00000517402 PP632Q6XCG6 107 aa8.14□□□□□ -1.11
HOXA11-202ENST00000517402 USH2AO75445 5202 aa8.11□□□□□ -1.11
HOXA11-202ENST00000517402 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
HOXA11-202ENST00000517402 MT1XP80297 61 aa8.06□□□□□ -1.12
HOXA11-202ENST00000517402 KRTAP15-1Q3LI76 137 aa8.05□□□□□ -1.12
HOXA11-202ENST00000517402 LCE2BO14633 110 aa8.02□□□□□ -1.13
HOXA11-202ENST00000517402 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.13
HOXA11-202ENST00000517402 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
HOXA11-202ENST00000517402 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
HOXA11-202ENST00000517402 FSIP2Q5CZC0 6907 aa7.8□□□□□ -1.16
HOXA11-202ENST00000517402 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
HOXA11-202ENST00000517402 KRTAP10-12P60413 245 aa7.76□□□□□ -1.17
HOXA11-202ENST00000517402 KMT2DO14686 5537 aa7.71□□□□□ -1.17
HOXA11-202ENST00000517402 H3BS24 57 aa7.7□□□□□ -1.18
HOXA11-202ENST00000517402 SSPOA2VEC9 5147 aa7.69□□□□□ -1.18
HOXA11-202ENST00000517402 NDUFAF8A1L188 74 aa7.69□□□□□ -1.18
HOXA11-202ENST00000517402 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
HOXA11-202ENST00000517402 LCE2DQ5TA82 110 aaPredicted RBP7.65□□□□□ -1.18
HOXA11-202ENST00000517402 KRTAP12-3P60328 96 aa7.54□□□□□ -1.2
HOXA11-202ENST00000517402 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.21
HOXA11-202ENST00000517402 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
HOXA11-202ENST00000517402 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
HOXA11-202ENST00000517402 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.22
HOXA11-202ENST00000517402 LUZP6Q538Z0 58 aa7.4□□□□□ -1.22
HOXA11-202ENST00000517402 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
HOXA11-202ENST00000517402 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
HOXA11-202ENST00000517402 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
HOXA11-202ENST00000517402 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
HOXA11-202ENST00000517402 KRTAP19-7Q3SYF9 63 aa7.19□□□□□ -1.26
HOXA11-202ENST00000517402 LCE3CQ5T5A8 94 aa7.06□□□□□ -1.28
HOXA11-202ENST00000517402 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
HOXA11-202ENST00000517402 MT1EP04732 61 aa7.01□□□□□ -1.29
HOXA11-202ENST00000517402 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
HOXA11-202ENST00000517402 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
HOXA11-202ENST00000517402 MT1LQ93083 61 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms