RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 LOC101927531A0A1B0GV80 90 aa4.67□□□□□ -1.66
SFXN1-211ENST00000515736 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
SFXN1-211ENST00000515736 NDUFS5O43920 106 aa4.66□□□□□ -1.66
SFXN1-211ENST00000515736 C1orf195Q5TG92 126 aa4.66□□□□□ -1.66
SFXN1-211ENST00000515736 LINC00313P59037 77 aa4.65□□□□□ -1.67
SFXN1-211ENST00000515736 LINC00304Q8N9R0 145 aa4.62□□□□□ -1.67
SFXN1-211ENST00000515736 MT1HL1P0DM35 61 aa4.6□□□□□ -1.67
SFXN1-211ENST00000515736 KRTAP13-3Q3SY46 172 aa4.6□□□□□ -1.67
SFXN1-211ENST00000515736 FP248Q71RG6 208 aaPredicted RBP4.6□□□□□ -1.67
SFXN1-211ENST00000515736 LRP1Q07954 4544 aaKnown RBP4.6□□□□□ -1.67
SFXN1-211ENST00000515736 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
SFXN1-211ENST00000515736 Q1T7F1 81 aa4.59□□□□□ -1.67
SFXN1-211ENST00000515736 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.68
SFXN1-211ENST00000515736 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
SFXN1-211ENST00000515736 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
SFXN1-211ENST00000515736 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
SFXN1-211ENST00000515736 C4orf26Q17RF5 130 aa4.54□□□□□ -1.68
SFXN1-211ENST00000515736 PCOTHQ58A44 107 aa4.54□□□□□ -1.68
SFXN1-211ENST00000515736 Q5W150 140 aa4.54□□□□□ -1.68
SFXN1-211ENST00000515736 COA5Q86WW8 74 aa4.53□□□□□ -1.68
SFXN1-211ENST00000515736 ACYP2P14621 99 aa4.51□□□□□ -1.69
SFXN1-211ENST00000515736 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
SFXN1-211ENST00000515736 PSPHP1O15172 72 aa4.49□□□□□ -1.69
SFXN1-211ENST00000515736 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
SFXN1-211ENST00000515736 C7orf65Q6ZTY9 151 aa4.48□□□□□ -1.69
SFXN1-211ENST00000515736 C20orf166-AS1Q96NR2 134 aa4.48□□□□□ -1.69
SFXN1-211ENST00000515736 A8MUN3 132 aa4.47□□□□□ -1.69
SFXN1-211ENST00000515736 A8MUU9 505 aa4.47□□□□□ -1.69
SFXN1-211ENST00000515736 HRES1P13985 223 aa4.47□□□□□ -1.69
SFXN1-211ENST00000515736 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
SFXN1-211ENST00000515736 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
SFXN1-211ENST00000515736 LRP2P98164 4655 aa4.44□□□□□ -1.7
SFXN1-211ENST00000515736 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
SFXN1-211ENST00000515736 CHKB-CPT1BH3BT56 60 aa4.42□□□□□ -1.7
SFXN1-211ENST00000515736 TNXBP22105 4242 aa4.41□□□□□ -1.7
SFXN1-211ENST00000515736 Q5VV11 94 aa4.4□□□□□ -1.71
SFXN1-211ENST00000515736 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
SFXN1-211ENST00000515736 RETNLBQ9BQ08 111 aa4.39□□□□□ -1.71
SFXN1-211ENST00000515736 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
SFXN1-211ENST00000515736 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
SFXN1-211ENST00000515736 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
SFXN1-211ENST00000515736 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
SFXN1-211ENST00000515736 A6NED7 52 aa4.32□□□□□ -1.72
SFXN1-211ENST00000515736 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
SFXN1-211ENST00000515736 SPINK7P58062 85 aa4.31□□□□□ -1.72
SFXN1-211ENST00000515736 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
SFXN1-211ENST00000515736 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
SFXN1-211ENST00000515736 A0A1B0GU69 56 aa4.3□□□□□ -1.72
SFXN1-211ENST00000515736 LPAP08519 4548 aa4.3□□□□□ -1.72
SFXN1-211ENST00000515736 COX6B2Q6YFQ2 88 aa4.28□□□□□ -1.72
SFXN1-211ENST00000515736 A8MU10 97 aa4.26□□□□□ -1.73
SFXN1-211ENST00000515736 TPRXLQ17RH7 258 aa4.26□□□□□ -1.73
SFXN1-211ENST00000515736 RBM12B-AS1Q9P1G2 102 aa4.26□□□□□ -1.73
SFXN1-211ENST00000515736 UQCR11O14957 56 aa4.24□□□□□ -1.73
SFXN1-211ENST00000515736 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SFXN1-211ENST00000515736 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
SFXN1-211ENST00000515736 LCA10Q71F78 164 aa4.22□□□□□ -1.73
SFXN1-211ENST00000515736 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
SFXN1-211ENST00000515736 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
SFXN1-211ENST00000515736 MUC2Q02817 5179 aa4.17□□□□□ -1.74
SFXN1-211ENST00000515736 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
SFXN1-211ENST00000515736 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
SFXN1-211ENST00000515736 A6NN06 94 aa4.13□□□□□ -1.75
SFXN1-211ENST00000515736 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
SFXN1-211ENST00000515736 S4R3F8 94 aa4.12□□□□□ -1.75
SFXN1-211ENST00000515736 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
SFXN1-211ENST00000515736 A0A1B0GU33 70 aa4.11□□□□□ -1.75
SFXN1-211ENST00000515736 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
SFXN1-211ENST00000515736 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
SFXN1-211ENST00000515736 H0YAA0 97 aa4.03□□□□□ -1.76
SFXN1-211ENST00000515736 K7ERS5 55 aa4.03□□□□□ -1.76
SFXN1-211ENST00000515736 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
SFXN1-211ENST00000515736 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
SFXN1-211ENST00000515736 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
SFXN1-211ENST00000515736 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
SFXN1-211ENST00000515736 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
SFXN1-211ENST00000515736 M0QZ58 72 aa3.95□□□□□ -1.78
SFXN1-211ENST00000515736 MT1HP80294 61 aa3.95□□□□□ -1.78
SFXN1-211ENST00000515736 M0R2T5 61 aa3.93□□□□□ -1.78
SFXN1-211ENST00000515736 ADM2Q7Z4H4 148 aa3.92□□□□□ -1.78
SFXN1-211ENST00000515736 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
SFXN1-211ENST00000515736 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
SFXN1-211ENST00000515736 P0C880 135 aa3.89□□□□□ -1.79
SFXN1-211ENST00000515736 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
SFXN1-211ENST00000515736 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
SFXN1-211ENST00000515736 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
SFXN1-211ENST00000515736 ROMO1P60602 79 aa3.83□□□□□ -1.8
SFXN1-211ENST00000515736 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
SFXN1-211ENST00000515736 R4GN34 69 aa3.81□□□□□ -1.8
SFXN1-211ENST00000515736 A0A0D9SG42 100 aa3.8□□□□□ -1.8
SFXN1-211ENST00000515736 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
SFXN1-211ENST00000515736 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
SFXN1-211ENST00000515736 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
SFXN1-211ENST00000515736 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
SFXN1-211ENST00000515736 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
SFXN1-211ENST00000515736 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
SFXN1-211ENST00000515736 FLGP20930 4061 aaPredicted RBP3.7□□□□□ -1.82
SFXN1-211ENST00000515736 MT2AP02795 61 aa3.64□□□□□ -1.83
SFXN1-211ENST00000515736 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
SFXN1-211ENST00000515736 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms