RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 UQCRQO14949 82 aa5.23□□□□□ -1.57
VCAN-212ENST00000515397 LINC00208Q96KT6 92 aa5.18□□□□□ -1.58
VCAN-212ENST00000515397 ATOX1O00244 68 aa5.17□□□□□ -1.58
VCAN-212ENST00000515397 KLKP1Q107X0 134 aa5.17□□□□□ -1.58
VCAN-212ENST00000515397 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.58
VCAN-212ENST00000515397 MT1BP07438 61 aa5.15□□□□□ -1.59
VCAN-212ENST00000515397 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
VCAN-212ENST00000515397 OCR1Q9BZK8 76 aa5.14□□□□□ -1.59
VCAN-212ENST00000515397 J3QR89 54 aa5.13□□□□□ -1.59
VCAN-212ENST00000515397 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
VCAN-212ENST00000515397 Q5VV11 94 aa5.11□□□□□ -1.59
VCAN-212ENST00000515397 NDUFC1O43677 76 aa5.1□□□□□ -1.59
VCAN-212ENST00000515397 MP68P56378 58 aa5.1□□□□□ -1.59
VCAN-212ENST00000515397 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
VCAN-212ENST00000515397 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
VCAN-212ENST00000515397 KRTAP6-3Q3LI67 103 aa5.08□□□□□ -1.6
VCAN-212ENST00000515397 A6NN06 94 aa5.07□□□□□ -1.6
VCAN-212ENST00000515397 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
VCAN-212ENST00000515397 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
VCAN-212ENST00000515397 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
VCAN-212ENST00000515397 IMUPQ9GZP8 106 aa5.07□□□□□ -1.6
VCAN-212ENST00000515397 A8MUN3 132 aa5.05□□□□□ -1.6
VCAN-212ENST00000515397 ADM2Q7Z4H4 148 aa5.05□□□□□ -1.6
VCAN-212ENST00000515397 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
VCAN-212ENST00000515397 K7ERU9 68 aa5.02□□□□□ -1.61
VCAN-212ENST00000515397 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
VCAN-212ENST00000515397 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
VCAN-212ENST00000515397 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
VCAN-212ENST00000515397 H0YAA0 97 aa5□□□□□ -1.61
VCAN-212ENST00000515397 KRTAP10-5P60370 271 aa5□□□□□ -1.61
VCAN-212ENST00000515397 H3BPC8 53 aa4.98□□□□□ -1.61
VCAN-212ENST00000515397 H3BS24 57 aa4.96□□□□□ -1.62
VCAN-212ENST00000515397 P0C880 135 aa4.96□□□□□ -1.62
VCAN-212ENST00000515397 DMAC1Q96GE9 116 aa4.95□□□□□ -1.62
VCAN-212ENST00000515397 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
VCAN-212ENST00000515397 TRAV7A0A075B6U4 112 aa4.9□□□□□ -1.63
VCAN-212ENST00000515397 R4GN34 69 aa4.88□□□□□ -1.63
VCAN-212ENST00000515397 M0QZ58 72 aa4.87□□□□□ -1.63
VCAN-212ENST00000515397 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
VCAN-212ENST00000515397 NEBP20929 6669 aa4.87□□□□□ -1.63
VCAN-212ENST00000515397 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
VCAN-212ENST00000515397 ACYP2P14621 99 aa4.85□□□□□ -1.63
VCAN-212ENST00000515397 LINC01554Q52M75 96 aa4.85□□□□□ -1.63
VCAN-212ENST00000515397 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
VCAN-212ENST00000515397 SMIM20Q8N5G0 67 aa4.84□□□□□ -1.63
VCAN-212ENST00000515397 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
VCAN-212ENST00000515397 MT1XP80297 61 aa4.83□□□□□ -1.64
VCAN-212ENST00000515397 KMT2DO14686 5537 aa4.82□□□□□ -1.64
VCAN-212ENST00000515397 C20orf197Q8N268 126 aa4.82□□□□□ -1.64
VCAN-212ENST00000515397 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
VCAN-212ENST00000515397 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
VCAN-212ENST00000515397 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
VCAN-212ENST00000515397 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
VCAN-212ENST00000515397 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
VCAN-212ENST00000515397 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
VCAN-212ENST00000515397 SPTSSBQ8NFR3 76 aa4.74□□□□□ -1.65
VCAN-212ENST00000515397 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
VCAN-212ENST00000515397 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
VCAN-212ENST00000515397 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
VCAN-212ENST00000515397 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
VCAN-212ENST00000515397 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
VCAN-212ENST00000515397 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
VCAN-212ENST00000515397 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
VCAN-212ENST00000515397 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
VCAN-212ENST00000515397 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
VCAN-212ENST00000515397 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
VCAN-212ENST00000515397 COA5Q86WW8 74 aa4.63□□□□□ -1.67
VCAN-212ENST00000515397 COX7CP15954 63 aa4.61□□□□□ -1.67
VCAN-212ENST00000515397 SPRR2EP22531 72 aa4.61□□□□□ -1.67
VCAN-212ENST00000515397 SPRR2BP35325 72 aa4.61□□□□□ -1.67
VCAN-212ENST00000515397 SPRR2AP35326 72 aa4.61□□□□□ -1.67
VCAN-212ENST00000515397 CYSTM1Q9H1C7 97 aa4.6□□□□□ -1.67
VCAN-212ENST00000515397 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
VCAN-212ENST00000515397 A0A0D9SG42 100 aa4.54□□□□□ -1.68
VCAN-212ENST00000515397 H7BZZ5 65 aa4.54□□□□□ -1.68
VCAN-212ENST00000515397 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
VCAN-212ENST00000515397 ANAPC13Q9BS18 74 aa4.53□□□□□ -1.68
VCAN-212ENST00000515397 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
VCAN-212ENST00000515397 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
VCAN-212ENST00000515397 SEC61GP60059 68 aa4.5□□□□□ -1.69
VCAN-212ENST00000515397 SERP1Q9Y6X1 66 aa4.5□□□□□ -1.69
VCAN-212ENST00000515397 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
VCAN-212ENST00000515397 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
VCAN-212ENST00000515397 A0A1B0GU33 70 aa4.46□□□□□ -1.7
VCAN-212ENST00000515397 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
VCAN-212ENST00000515397 SPRR2DP22532 72 aa4.44□□□□□ -1.7
VCAN-212ENST00000515397 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
VCAN-212ENST00000515397 CCDC179H3BU77 68 aa4.42□□□□□ -1.7
VCAN-212ENST00000515397 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
VCAN-212ENST00000515397 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
VCAN-212ENST00000515397 A0A1B0GU69 56 aa4.37□□□□□ -1.71
VCAN-212ENST00000515397 A8MU10 97 aa4.36□□□□□ -1.71
VCAN-212ENST00000515397 ATP5EP56381 51 aaPredicted RBP4.35□□□□□ -1.71
VCAN-212ENST00000515397 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
VCAN-212ENST00000515397 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
VCAN-212ENST00000515397 TMEM258P61165 79 aa4.3□□□□□ -1.72
VCAN-212ENST00000515397 SMIM26A0A096LP01 95 aa4.29□□□□□ -1.72
VCAN-212ENST00000515397 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
VCAN-212ENST00000515397 MT1EP04732 61 aa4.27□□□□□ -1.73
VCAN-212ENST00000515397 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms