RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
HERC4-214ENST00000513996 NDUFS5O43920 106 aa4.21□□□□□ -1.74
HERC4-214ENST00000513996 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
HERC4-214ENST00000513996 HIST1H4AP62805 103 aaKnown RBP4.2□□□□□ -1.74
HERC4-214ENST00000513996 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
HERC4-214ENST00000513996 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
HERC4-214ENST00000513996 HCG22E2RYF7 251 aa4.17□□□□□ -1.74
HERC4-214ENST00000513996 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
HERC4-214ENST00000513996 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
HERC4-214ENST00000513996 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
HERC4-214ENST00000513996 A0A087WVE0 104 aa4.15□□□□□ -1.75
HERC4-214ENST00000513996 FAM236AA0A1B0GUQ0 79 aa4.14□□□□□ -1.75
HERC4-214ENST00000513996 FAM236BA0A1B0GV22 79 aa4.14□□□□□ -1.75
HERC4-214ENST00000513996 ATOX1O00244 68 aa4.14□□□□□ -1.75
HERC4-214ENST00000513996 C7orf65Q6ZTY9 151 aa4.14□□□□□ -1.75
HERC4-214ENST00000513996 C4orf26Q17RF5 130 aa4.12□□□□□ -1.75
HERC4-214ENST00000513996 OCR1Q9BZK8 76 aa4.11□□□□□ -1.75
HERC4-214ENST00000513996 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
HERC4-214ENST00000513996 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
HERC4-214ENST00000513996 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
HERC4-214ENST00000513996 SERP2Q8N6R1 65 aa4.09□□□□□ -1.75
HERC4-214ENST00000513996 UQCRQO14949 82 aa4.08□□□□□ -1.76
HERC4-214ENST00000513996 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
HERC4-214ENST00000513996 ANAPC13Q9BS18 74 aa4.07□□□□□ -1.76
HERC4-214ENST00000513996 COX7CP15954 63 aa4.06□□□□□ -1.76
HERC4-214ENST00000513996 H3BPC8 53 aa4.05□□□□□ -1.76
HERC4-214ENST00000513996 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
HERC4-214ENST00000513996 C1orf64Q8NEQ6 169 aa4.03□□□□□ -1.76
HERC4-214ENST00000513996 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
HERC4-214ENST00000513996 MP68P56378 58 aa4.02□□□□□ -1.77
HERC4-214ENST00000513996 KLKP1Q107X0 134 aa4□□□□□ -1.77
HERC4-214ENST00000513996 LCA10Q71F78 164 aa4□□□□□ -1.77
HERC4-214ENST00000513996 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
HERC4-214ENST00000513996 S4R3F8 94 aa4□□□□□ -1.77
HERC4-214ENST00000513996 H0Y9P7 68 aa3.99□□□□□ -1.77
HERC4-214ENST00000513996 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
HERC4-214ENST00000513996 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
HERC4-214ENST00000513996 NDUFC1O43677 76 aa3.98□□□□□ -1.77
HERC4-214ENST00000513996 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
HERC4-214ENST00000513996 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
HERC4-214ENST00000513996 LINC00208Q96KT6 92 aa3.96□□□□□ -1.78
HERC4-214ENST00000513996 CCDC179H3BU77 68 aa3.95□□□□□ -1.78
HERC4-214ENST00000513996 MT1BP07438 61 aa3.94□□□□□ -1.78
HERC4-214ENST00000513996 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
HERC4-214ENST00000513996 H7BZZ5 65 aa3.91□□□□□ -1.78
HERC4-214ENST00000513996 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
HERC4-214ENST00000513996 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
HERC4-214ENST00000513996 SNURFQ9Y675 71 aa3.91□□□□□ -1.78
HERC4-214ENST00000513996 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
HERC4-214ENST00000513996 TMEM258P61165 79 aa3.88□□□□□ -1.79
HERC4-214ENST00000513996 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
HERC4-214ENST00000513996 ATP5EP56381 51 aaPredicted RBP3.87□□□□□ -1.79
HERC4-214ENST00000513996 Q5VV11 94 aa3.87□□□□□ -1.79
HERC4-214ENST00000513996 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
HERC4-214ENST00000513996 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
HERC4-214ENST00000513996 A6NN06 94 aa3.83□□□□□ -1.8
HERC4-214ENST00000513996 A8MUN3 132 aa3.83□□□□□ -1.8
HERC4-214ENST00000513996 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
HERC4-214ENST00000513996 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
HERC4-214ENST00000513996 H0YAA0 97 aa3.8□□□□□ -1.8
HERC4-214ENST00000513996 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
HERC4-214ENST00000513996 V9GYY9 64 aa3.8□□□□□ -1.8
HERC4-214ENST00000513996 ACYP2P14621 99 aa3.79□□□□□ -1.8
HERC4-214ENST00000513996 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
HERC4-214ENST00000513996 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
HERC4-214ENST00000513996 ADM2Q7Z4H4 148 aa3.78□□□□□ -1.8
HERC4-214ENST00000513996 SERP1Q9Y6X1 66 aa3.76□□□□□ -1.81
HERC4-214ENST00000513996 P0C880 135 aa3.72□□□□□ -1.81
HERC4-214ENST00000513996 COA5Q86WW8 74 aa3.71□□□□□ -1.82
HERC4-214ENST00000513996 SPTSSBQ8NFR3 76 aa3.69□□□□□ -1.82
HERC4-214ENST00000513996 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
HERC4-214ENST00000513996 MT1XP80297 61 aa3.68□□□□□ -1.82
HERC4-214ENST00000513996 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
HERC4-214ENST00000513996 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
HERC4-214ENST00000513996 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
HERC4-214ENST00000513996 R4GN34 69 aa3.65□□□□□ -1.83
HERC4-214ENST00000513996 M0QZ58 72 aa3.64□□□□□ -1.83
HERC4-214ENST00000513996 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
HERC4-214ENST00000513996 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
HERC4-214ENST00000513996 Q1T7F1 81 aa3.61□□□□□ -1.83
HERC4-214ENST00000513996 KMT2DO14686 5537 aa3.6□□□□□ -1.83
HERC4-214ENST00000513996 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
HERC4-214ENST00000513996 LINC01558Q9Y6Z2 57 aa3.6□□□□□ -1.83
HERC4-214ENST00000513996 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
HERC4-214ENST00000513996 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
HERC4-214ENST00000513996 NEBP20929 6669 aa3.59□□□□□ -1.83
HERC4-214ENST00000513996 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
HERC4-214ENST00000513996 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
HERC4-214ENST00000513996 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
HERC4-214ENST00000513996 PRR15LQ9BU68 103 aa3.54□□□□□ -1.84
HERC4-214ENST00000513996 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
HERC4-214ENST00000513996 A0A1B0GU69 56 aa3.53□□□□□ -1.84
HERC4-214ENST00000513996 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
HERC4-214ENST00000513996 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
HERC4-214ENST00000513996 SPRR2EP22531 72 aa3.5□□□□□ -1.85
HERC4-214ENST00000513996 SPRR2BP35325 72 aa3.5□□□□□ -1.85
HERC4-214ENST00000513996 SPRR2AP35326 72 aa3.5□□□□□ -1.85
HERC4-214ENST00000513996 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
HERC4-214ENST00000513996 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
HERC4-214ENST00000513996 PSPHP1O15172 72 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms