RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 CYSTM1Q9H1C7 97 aa5.35□□□□□ -1.55
HTT-213ENST00000513806 A8MUN3 132 aa5.34□□□□□ -1.55
HTT-213ENST00000513806 DMAC1Q96GE9 116 aa5.34□□□□□ -1.55
HTT-213ENST00000513806 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
HTT-213ENST00000513806 CSAG1Q6PB30 78 aa5.32□□□□□ -1.56
HTT-213ENST00000513806 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
HTT-213ENST00000513806 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
HTT-213ENST00000513806 NDUFC1O43677 76 aa5.28□□□□□ -1.56
HTT-213ENST00000513806 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
HTT-213ENST00000513806 H7BZZ5 65 aa5.25□□□□□ -1.57
HTT-213ENST00000513806 ACYP2P14621 99 aa5.25□□□□□ -1.57
HTT-213ENST00000513806 SPANXA2-OT1Q8N9U9 137 aa5.24□□□□□ -1.57
HTT-213ENST00000513806 LCE2BO14633 110 aa5.21□□□□□ -1.58
HTT-213ENST00000513806 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
HTT-213ENST00000513806 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
HTT-213ENST00000513806 COA5Q86WW8 74 aa5.15□□□□□ -1.59
HTT-213ENST00000513806 USH2AO75445 5202 aa5.13□□□□□ -1.59
HTT-213ENST00000513806 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
HTT-213ENST00000513806 H0YAA0 97 aa5.12□□□□□ -1.59
HTT-213ENST00000513806 P0C880 135 aa5.12□□□□□ -1.59
HTT-213ENST00000513806 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
HTT-213ENST00000513806 SPTSSBQ8NFR3 76 aa5.09□□□□□ -1.59
HTT-213ENST00000513806 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
HTT-213ENST00000513806 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
HTT-213ENST00000513806 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
HTT-213ENST00000513806 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
HTT-213ENST00000513806 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
HTT-213ENST00000513806 MT1BP07438 61 aa5.01□□□□□ -1.61
HTT-213ENST00000513806 TMEM258P61165 79 aa5.01□□□□□ -1.61
HTT-213ENST00000513806 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
HTT-213ENST00000513806 ATP5EP56381 51 aaPredicted RBP5□□□□□ -1.61
HTT-213ENST00000513806 M0QZ58 72 aa4.99□□□□□ -1.61
HTT-213ENST00000513806 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
HTT-213ENST00000513806 PCP4P48539 62 aa4.97□□□□□ -1.61
HTT-213ENST00000513806 Q5VV11 94 aa4.97□□□□□ -1.61
HTT-213ENST00000513806 R4GN34 69 aa4.97□□□□□ -1.61
HTT-213ENST00000513806 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
HTT-213ENST00000513806 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
HTT-213ENST00000513806 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
HTT-213ENST00000513806 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
HTT-213ENST00000513806 SEC61GP60059 68 aa4.88□□□□□ -1.63
HTT-213ENST00000513806 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
HTT-213ENST00000513806 A0A1B0GU69 56 aa4.85□□□□□ -1.63
HTT-213ENST00000513806 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
HTT-213ENST00000513806 A0A1B0GU33 70 aa4.82□□□□□ -1.64
HTT-213ENST00000513806 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
HTT-213ENST00000513806 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
HTT-213ENST00000513806 A6NN06 94 aa4.8□□□□□ -1.64
HTT-213ENST00000513806 A0A0D9SG42 100 aa4.79□□□□□ -1.64
HTT-213ENST00000513806 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
HTT-213ENST00000513806 MT1XP80297 61 aa4.76□□□□□ -1.65
HTT-213ENST00000513806 PRR15LQ9BU68 103 aa4.75□□□□□ -1.65
HTT-213ENST00000513806 A8MU10 97 aa4.73□□□□□ -1.65
HTT-213ENST00000513806 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
HTT-213ENST00000513806 PSPHP1O15172 72 aa4.69□□□□□ -1.66
HTT-213ENST00000513806 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
HTT-213ENST00000513806 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
HTT-213ENST00000513806 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
HTT-213ENST00000513806 Q1T7F1 81 aa4.67□□□□□ -1.66
HTT-213ENST00000513806 KRTAP12-2P59991 146 aa4.66□□□□□ -1.66
HTT-213ENST00000513806 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.67
HTT-213ENST00000513806 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
HTT-213ENST00000513806 V9GYY9 64 aa4.63□□□□□ -1.67
HTT-213ENST00000513806 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
HTT-213ENST00000513806 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
HTT-213ENST00000513806 UQCR11O14957 56 aa4.6□□□□□ -1.67
HTT-213ENST00000513806 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
HTT-213ENST00000513806 KRTAP10-7P60409 375 aaPredicted RBP4.58□□□□□ -1.68
HTT-213ENST00000513806 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
HTT-213ENST00000513806 KMT2DO14686 5537 aa4.54□□□□□ -1.68
HTT-213ENST00000513806 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
HTT-213ENST00000513806 A6NED7 52 aa4.51□□□□□ -1.69
HTT-213ENST00000513806 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
HTT-213ENST00000513806 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
HTT-213ENST00000513806 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
HTT-213ENST00000513806 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
HTT-213ENST00000513806 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
HTT-213ENST00000513806 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
HTT-213ENST00000513806 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
HTT-213ENST00000513806 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
HTT-213ENST00000513806 K7ERS5 55 aa4.35□□□□□ -1.71
HTT-213ENST00000513806 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
HTT-213ENST00000513806 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
HTT-213ENST00000513806 TNP1P09430 55 aa4.31□□□□□ -1.72
HTT-213ENST00000513806 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
HTT-213ENST00000513806 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
HTT-213ENST00000513806 SPRR2EP22531 72 aa4.24□□□□□ -1.73
HTT-213ENST00000513806 SPRR2BP35325 72 aa4.24□□□□□ -1.73
HTT-213ENST00000513806 SPRR2AP35326 72 aa4.24□□□□□ -1.73
HTT-213ENST00000513806 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
HTT-213ENST00000513806 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
HTT-213ENST00000513806 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
HTT-213ENST00000513806 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
HTT-213ENST00000513806 NEBP20929 6669 aa4.19□□□□□ -1.74
HTT-213ENST00000513806 MT1EP04732 61 aa4.19□□□□□ -1.74
HTT-213ENST00000513806 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
HTT-213ENST00000513806 ROMO1P60602 79 aa4.17□□□□□ -1.74
HTT-213ENST00000513806 SPRR2DP22532 72 aa4.09□□□□□ -1.75
HTT-213ENST00000513806 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
HTT-213ENST00000513806 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms