RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
CPNE4-210ENST00000512332 RYR2Q92736 4967 aa4.95□□□□□ -1.62
CPNE4-210ENST00000512332 SEC61GP60059 68 aa4.94□□□□□ -1.62
CPNE4-210ENST00000512332 FLG2Q5D862 2391 aaPredicted RBP4.93□□□□□ -1.62
CPNE4-210ENST00000512332 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
CPNE4-210ENST00000512332 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
CPNE4-210ENST00000512332 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
CPNE4-210ENST00000512332 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
CPNE4-210ENST00000512332 H3BS24 57 aa4.89□□□□□ -1.63
CPNE4-210ENST00000512332 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
CPNE4-210ENST00000512332 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
CPNE4-210ENST00000512332 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
CPNE4-210ENST00000512332 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
CPNE4-210ENST00000512332 Q5VSD8 79 aa4.85□□□□□ -1.63
CPNE4-210ENST00000512332 KMT2CQ8NEZ4 4911 aaKnown RBP4.85□□□□□ -1.63
CPNE4-210ENST00000512332 RBM12B-AS1Q9P1G2 102 aa4.85□□□□□ -1.63
CPNE4-210ENST00000512332 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
CPNE4-210ENST00000512332 RPL37P61927 97 aaKnown RBP4.83□□□□□ -1.64
CPNE4-210ENST00000512332 TNXBP22105 4242 aa4.82□□□□□ -1.64
CPNE4-210ENST00000512332 A0A1B0GU33 70 aa4.82□□□□□ -1.64
CPNE4-210ENST00000512332 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
CPNE4-210ENST00000512332 H0YAA0 97 aa4.8□□□□□ -1.64
CPNE4-210ENST00000512332 H1FX-AS1Q4G0G2 97 aa4.8□□□□□ -1.64
CPNE4-210ENST00000512332 LRP1Q07954 4544 aaKnown RBP4.78□□□□□ -1.64
CPNE4-210ENST00000512332 HSPG2P98160 4391 aa4.78□□□□□ -1.64
CPNE4-210ENST00000512332 DMBT1Q9UGM3 2413 aaPredicted RBP4.77□□□□□ -1.65
CPNE4-210ENST00000512332 RYR1P21817 5038 aa4.76□□□□□ -1.65
CPNE4-210ENST00000512332 KRTAP4-5Q9BYR2 181 aa4.76□□□□□ -1.65
CPNE4-210ENST00000512332 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
CPNE4-210ENST00000512332 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
CPNE4-210ENST00000512332 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
CPNE4-210ENST00000512332 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
CPNE4-210ENST00000512332 S4R3F8 94 aa4.69□□□□□ -1.66
CPNE4-210ENST00000512332 RYR3Q15413 4870 aa4.69□□□□□ -1.66
CPNE4-210ENST00000512332 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
CPNE4-210ENST00000512332 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
CPNE4-210ENST00000512332 K7ERS5 55 aa4.66□□□□□ -1.66
CPNE4-210ENST00000512332 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
CPNE4-210ENST00000512332 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
CPNE4-210ENST00000512332 CSAG1Q6PB30 78 aa4.65□□□□□ -1.67
CPNE4-210ENST00000512332 LINC01554Q52M75 96 aa4.64□□□□□ -1.67
CPNE4-210ENST00000512332 MYCBP2O75592 4640 aa4.63□□□□□ -1.67
CPNE4-210ENST00000512332 KRTAP13-4Q3LI77 160 aa4.59□□□□□ -1.67
CPNE4-210ENST00000512332 P0C880 135 aa4.57□□□□□ -1.68
CPNE4-210ENST00000512332 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
CPNE4-210ENST00000512332 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
CPNE4-210ENST00000512332 ROMO1P60602 79 aa4.54□□□□□ -1.68
CPNE4-210ENST00000512332 LRP2P98164 4655 aa4.52□□□□□ -1.69
CPNE4-210ENST00000512332 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
CPNE4-210ENST00000512332 A0A0D9SG42 100 aa4.52□□□□□ -1.69
CPNE4-210ENST00000512332 M0QZ58 72 aa4.5□□□□□ -1.69
CPNE4-210ENST00000512332 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
CPNE4-210ENST00000512332 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
CPNE4-210ENST00000512332 LPAP08519 4548 aa4.48□□□□□ -1.69
CPNE4-210ENST00000512332 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.7
CPNE4-210ENST00000512332 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
CPNE4-210ENST00000512332 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
CPNE4-210ENST00000512332 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
CPNE4-210ENST00000512332 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
CPNE4-210ENST00000512332 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
CPNE4-210ENST00000512332 R4GN34 69 aa4.35□□□□□ -1.71
CPNE4-210ENST00000512332 MUC17Q685J3 4493 aa4.35□□□□□ -1.71
CPNE4-210ENST00000512332 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
CPNE4-210ENST00000512332 HERC2O95714 4834 aa4.31□□□□□ -1.72
CPNE4-210ENST00000512332 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
CPNE4-210ENST00000512332 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.73
CPNE4-210ENST00000512332 FLGP20930 4061 aaPredicted RBP4.16□□□□□ -1.74
CPNE4-210ENST00000512332 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.74
CPNE4-210ENST00000512332 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
CPNE4-210ENST00000512332 MUC2Q02817 5179 aa4.12□□□□□ -1.75
CPNE4-210ENST00000512332 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
CPNE4-210ENST00000512332 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CPNE4-210ENST00000512332 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.76
CPNE4-210ENST00000512332 HERC1Q15751 4861 aa4.08□□□□□ -1.76
CPNE4-210ENST00000512332 PCLOQ9Y6V0 5065 aa4.07□□□□□ -1.76
CPNE4-210ENST00000512332 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
CPNE4-210ENST00000512332 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
CPNE4-210ENST00000512332 TNP1P09430 55 aa3.99□□□□□ -1.77
CPNE4-210ENST00000512332 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
CPNE4-210ENST00000512332 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
CPNE4-210ENST00000512332 MT1HP80294 61 aa3.97□□□□□ -1.77
CPNE4-210ENST00000512332 M0R2T5 61 aa3.93□□□□□ -1.78
CPNE4-210ENST00000512332 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
CPNE4-210ENST00000512332 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
CPNE4-210ENST00000512332 MT2AP02795 61 aa3.89□□□□□ -1.79
CPNE4-210ENST00000512332 MT1FP04733 61 aa3.87□□□□□ -1.79
CPNE4-210ENST00000512332 UBR4Q5T4S7 5183 aa3.87□□□□□ -1.79
CPNE4-210ENST00000512332 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
CPNE4-210ENST00000512332 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
CPNE4-210ENST00000512332 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
CPNE4-210ENST00000512332 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
CPNE4-210ENST00000512332 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
CPNE4-210ENST00000512332 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
CPNE4-210ENST00000512332 MT1BP07438 61 aa3.76□□□□□ -1.81
CPNE4-210ENST00000512332 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
CPNE4-210ENST00000512332 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
CPNE4-210ENST00000512332 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
CPNE4-210ENST00000512332 MT1XP80297 61 aa3.72□□□□□ -1.81
CPNE4-210ENST00000512332 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
CPNE4-210ENST00000512332 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms