RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 H7BZZ5 65 aa5.64□□□□□ -1.51
HOXA4-203ENST00000511914 TPRXLQ17RH7 258 aa5.64□□□□□ -1.51
HOXA4-203ENST00000511914 Q5W150 140 aa5.64□□□□□ -1.51
HOXA4-203ENST00000511914 TMEM258P61165 79 aa5.63□□□□□ -1.51
HOXA4-203ENST00000511914 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
HOXA4-203ENST00000511914 ATP5EP56381 51 aaPredicted RBP5.6□□□□□ -1.51
HOXA4-203ENST00000511914 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
HOXA4-203ENST00000511914 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
HOXA4-203ENST00000511914 SPANXA2-OT1Q8N9U9 137 aa5.58□□□□□ -1.52
HOXA4-203ENST00000511914 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
HOXA4-203ENST00000511914 ATP11AUNQ6ZP68 121 aa5.56□□□□□ -1.52
HOXA4-203ENST00000511914 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
HOXA4-203ENST00000511914 C7orf65Q6ZTY9 151 aa5.54□□□□□ -1.52
HOXA4-203ENST00000511914 FAM236DA0A1B0GTK5 79 aa5.53□□□□□ -1.52
HOXA4-203ENST00000511914 FAM236CP0DP71 79 aa5.53□□□□□ -1.52
HOXA4-203ENST00000511914 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
HOXA4-203ENST00000511914 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
HOXA4-203ENST00000511914 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
HOXA4-203ENST00000511914 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
HOXA4-203ENST00000511914 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
HOXA4-203ENST00000511914 SPINK7P58062 85 aa5.47□□□□□ -1.53
HOXA4-203ENST00000511914 HRES1P13985 223 aa5.46□□□□□ -1.54
HOXA4-203ENST00000511914 SERP1Q9Y6X1 66 aa5.46□□□□□ -1.54
HOXA4-203ENST00000511914 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
HOXA4-203ENST00000511914 A8MUN3 132 aa5.42□□□□□ -1.54
HOXA4-203ENST00000511914 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
HOXA4-203ENST00000511914 DMAC1Q96GE9 116 aa5.42□□□□□ -1.54
HOXA4-203ENST00000511914 ACYP2P14621 99 aa5.41□□□□□ -1.54
HOXA4-203ENST00000511914 C4orf26Q17RF5 130 aa5.36□□□□□ -1.55
HOXA4-203ENST00000511914 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
HOXA4-203ENST00000511914 MT1HP80294 61 aa5.35□□□□□ -1.55
HOXA4-203ENST00000511914 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
HOXA4-203ENST00000511914 COA5Q86WW8 74 aa5.34□□□□□ -1.55
HOXA4-203ENST00000511914 MPLKIPQ8TAP9 179 aa5.32□□□□□ -1.56
HOXA4-203ENST00000511914 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
HOXA4-203ENST00000511914 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
HOXA4-203ENST00000511914 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
HOXA4-203ENST00000511914 CHKB-CPT1BH3BT56 60 aa5.28□□□□□ -1.56
HOXA4-203ENST00000511914 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
HOXA4-203ENST00000511914 M0R2T5 61 aa5.26□□□□□ -1.57
HOXA4-203ENST00000511914 SPTSSBQ8NFR3 76 aa5.26□□□□□ -1.57
HOXA4-203ENST00000511914 V9GYY9 64 aa5.25□□□□□ -1.57
HOXA4-203ENST00000511914 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
HOXA4-203ENST00000511914 Q1T7F1 81 aa5.22□□□□□ -1.57
HOXA4-203ENST00000511914 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
HOXA4-203ENST00000511914 S4R3F8 94 aa5.17□□□□□ -1.58
HOXA4-203ENST00000511914 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
HOXA4-203ENST00000511914 LCA10Q71F78 164 aa5.13□□□□□ -1.59
HOXA4-203ENST00000511914 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
HOXA4-203ENST00000511914 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
HOXA4-203ENST00000511914 SEC61GP60059 68 aa5.08□□□□□ -1.6
HOXA4-203ENST00000511914 A0A1B0GU69 56 aa5.06□□□□□ -1.6
HOXA4-203ENST00000511914 PSPHP1O15172 72 aa5.04□□□□□ -1.6
HOXA4-203ENST00000511914 USH2AO75445 5202 aa5.04□□□□□ -1.6
HOXA4-203ENST00000511914 Q5VV11 94 aa5.03□□□□□ -1.6
HOXA4-203ENST00000511914 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
HOXA4-203ENST00000511914 H0YAA0 97 aa5.02□□□□□ -1.61
HOXA4-203ENST00000511914 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
HOXA4-203ENST00000511914 UQCR11O14957 56 aa4.94□□□□□ -1.62
HOXA4-203ENST00000511914 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
HOXA4-203ENST00000511914 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
HOXA4-203ENST00000511914 A0A1B0GU33 70 aa4.92□□□□□ -1.62
HOXA4-203ENST00000511914 A6NED7 52 aa4.92□□□□□ -1.62
HOXA4-203ENST00000511914 MT2AP02795 61 aa4.92□□□□□ -1.62
HOXA4-203ENST00000511914 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
HOXA4-203ENST00000511914 MT1FP04733 61 aa4.9□□□□□ -1.63
HOXA4-203ENST00000511914 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
HOXA4-203ENST00000511914 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
HOXA4-203ENST00000511914 P0C880 135 aa4.87□□□□□ -1.63
HOXA4-203ENST00000511914 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
HOXA4-203ENST00000511914 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
HOXA4-203ENST00000511914 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
HOXA4-203ENST00000511914 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
HOXA4-203ENST00000511914 M0QZ58 72 aa4.85□□□□□ -1.63
HOXA4-203ENST00000511914 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
HOXA4-203ENST00000511914 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
HOXA4-203ENST00000511914 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
HOXA4-203ENST00000511914 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
HOXA4-203ENST00000511914 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
HOXA4-203ENST00000511914 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
HOXA4-203ENST00000511914 R4GN34 69 aa4.77□□□□□ -1.65
HOXA4-203ENST00000511914 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
HOXA4-203ENST00000511914 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
HOXA4-203ENST00000511914 A8MU10 97 aa4.71□□□□□ -1.66
HOXA4-203ENST00000511914 K7ERS5 55 aa4.69□□□□□ -1.66
HOXA4-203ENST00000511914 A6NN06 94 aa4.68□□□□□ -1.66
HOXA4-203ENST00000511914 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
HOXA4-203ENST00000511914 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
HOXA4-203ENST00000511914 A0A0D9SG42 100 aa4.66□□□□□ -1.66
HOXA4-203ENST00000511914 NEBP20929 6669 aa4.64□□□□□ -1.67
HOXA4-203ENST00000511914 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
HOXA4-203ENST00000511914 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
HOXA4-203ENST00000511914 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
HOXA4-203ENST00000511914 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
HOXA4-203ENST00000511914 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
HOXA4-203ENST00000511914 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
HOXA4-203ENST00000511914 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
HOXA4-203ENST00000511914 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
HOXA4-203ENST00000511914 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
HOXA4-203ENST00000511914 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms