RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
CXCL3-204ENST00000511669 RBM12B-AS1Q9P1G2 102 aa8.47□□□□□ -1.05
CXCL3-204ENST00000511669 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
CXCL3-204ENST00000511669 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
CXCL3-204ENST00000511669 S4R3F8 94 aa8.41□□□□□ -1.06
CXCL3-204ENST00000511669 UQCR11O14957 56 aa8.4□□□□□ -1.06
CXCL3-204ENST00000511669 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.07
CXCL3-204ENST00000511669 HERC1Q15751 4861 aa8.34□□□□□ -1.07
CXCL3-204ENST00000511669 LCA10Q71F78 164 aa8.33□□□□□ -1.08
CXCL3-204ENST00000511669 MIR22HGQ0VDD5 57 aa8.3□□□□□ -1.08
CXCL3-204ENST00000511669 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
CXCL3-204ENST00000511669 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
CXCL3-204ENST00000511669 A0A1B0GU33 70 aa8.23□□□□□ -1.09
CXCL3-204ENST00000511669 A8MU10 97 aa8.21□□□□□ -1.1
CXCL3-204ENST00000511669 CSAG1Q6PB30 78 aa8.21□□□□□ -1.1
CXCL3-204ENST00000511669 PMAIP1Q13794 54 aa8.19□□□□□ -1.1
CXCL3-204ENST00000511669 LRP2P98164 4655 aa8.18□□□□□ -1.1
CXCL3-204ENST00000511669 LPAP08519 4548 aa8.14□□□□□ -1.11
CXCL3-204ENST00000511669 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
CXCL3-204ENST00000511669 H0YAA0 97 aa8.06□□□□□ -1.12
CXCL3-204ENST00000511669 KRTAP4-1Q9BYQ7 146 aa8.06□□□□□ -1.12
CXCL3-204ENST00000511669 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
CXCL3-204ENST00000511669 A6NN06 94 aa8.03□□□□□ -1.12
CXCL3-204ENST00000511669 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
CXCL3-204ENST00000511669 K7ERS5 55 aa8.02□□□□□ -1.13
CXCL3-204ENST00000511669 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
CXCL3-204ENST00000511669 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
CXCL3-204ENST00000511669 P0C880 135 aa7.94□□□□□ -1.14
CXCL3-204ENST00000511669 KTN1-AS1Q86SY8 53 aa7.93□□□□□ -1.14
CXCL3-204ENST00000511669 M0QZ58 72 aa7.92□□□□□ -1.14
CXCL3-204ENST00000511669 KRTAP19-2Q3LHN2 52 aa7.89□□□□□ -1.15
CXCL3-204ENST00000511669 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
CXCL3-204ENST00000511669 UBR4Q5T4S7 5183 aa7.82□□□□□ -1.16
CXCL3-204ENST00000511669 A0A0D9SG42 100 aa7.81□□□□□ -1.16
CXCL3-204ENST00000511669 R4GN34 69 aa7.78□□□□□ -1.16
CXCL3-204ENST00000511669 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
CXCL3-204ENST00000511669 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
CXCL3-204ENST00000511669 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
CXCL3-204ENST00000511669 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
CXCL3-204ENST00000511669 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
CXCL3-204ENST00000511669 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
CXCL3-204ENST00000511669 M0R2T5 61 aa7.6□□□□□ -1.19
CXCL3-204ENST00000511669 ROMO1P60602 79 aa7.6□□□□□ -1.19
CXCL3-204ENST00000511669 FLGP20930 4061 aaPredicted RBP7.59□□□□□ -1.19
CXCL3-204ENST00000511669 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
CXCL3-204ENST00000511669 PRAC1Q96KF2 57 aa7.53□□□□□ -1.2
CXCL3-204ENST00000511669 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.2
CXCL3-204ENST00000511669 MUC2Q02817 5179 aa7.52□□□□□ -1.21
CXCL3-204ENST00000511669 MT1HP80294 61 aa7.5□□□□□ -1.21
CXCL3-204ENST00000511669 LCE2DQ5TA82 110 aaPredicted RBP7.42□□□□□ -1.22
CXCL3-204ENST00000511669 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
CXCL3-204ENST00000511669 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
CXCL3-204ENST00000511669 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
CXCL3-204ENST00000511669 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
CXCL3-204ENST00000511669 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
CXCL3-204ENST00000511669 MT2AP02795 61 aa7.27□□□□□ -1.25
CXCL3-204ENST00000511669 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
CXCL3-204ENST00000511669 KRTAP9-8Q9BYQ0 159 aa7.23□□□□□ -1.25
CXCL3-204ENST00000511669 MT1FP04733 61 aa7.21□□□□□ -1.26
CXCL3-204ENST00000511669 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
CXCL3-204ENST00000511669 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
CXCL3-204ENST00000511669 C10orf95Q9H7T3 257 aa7.16□□□□□ -1.26
CXCL3-204ENST00000511669 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
CXCL3-204ENST00000511669 TNP1P09430 55 aa7.03□□□□□ -1.28
CXCL3-204ENST00000511669 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
CXCL3-204ENST00000511669 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
CXCL3-204ENST00000511669 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
CXCL3-204ENST00000511669 MT1BP07438 61 aa6.88□□□□□ -1.31
CXCL3-204ENST00000511669 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
CXCL3-204ENST00000511669 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
CXCL3-204ENST00000511669 MT1XP80297 61 aa6.73□□□□□ -1.33
CXCL3-204ENST00000511669 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
CXCL3-204ENST00000511669 LCE2BO14633 110 aa6.7□□□□□ -1.34
CXCL3-204ENST00000511669 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
CXCL3-204ENST00000511669 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
CXCL3-204ENST00000511669 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
CXCL3-204ENST00000511669 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
CXCL3-204ENST00000511669 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
CXCL3-204ENST00000511669 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.38
CXCL3-204ENST00000511669 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
CXCL3-204ENST00000511669 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
CXCL3-204ENST00000511669 USH2AO75445 5202 aa6.39□□□□□ -1.39
CXCL3-204ENST00000511669 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
CXCL3-204ENST00000511669 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
CXCL3-204ENST00000511669 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
CXCL3-204ENST00000511669 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
CXCL3-204ENST00000511669 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
CXCL3-204ENST00000511669 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
CXCL3-204ENST00000511669 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
CXCL3-204ENST00000511669 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
CXCL3-204ENST00000511669 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
CXCL3-204ENST00000511669 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
CXCL3-204ENST00000511669 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
CXCL3-204ENST00000511669 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
CXCL3-204ENST00000511669 KRTAP19-7Q3SYF9 63 aa5.98□□□□□ -1.45
CXCL3-204ENST00000511669 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
CXCL3-204ENST00000511669 MT1EP04732 61 aa5.9□□□□□ -1.46
CXCL3-204ENST00000511669 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
CXCL3-204ENST00000511669 H3BS24 57 aa5.86□□□□□ -1.47
CXCL3-204ENST00000511669 MT1LQ93083 61 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms