RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 KMT2AQ03164 3969 aa4.71□□□□□ -1.66
POLR2J3-215ENST00000511313 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
POLR2J3-215ENST00000511313 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
POLR2J3-215ENST00000511313 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
POLR2J3-215ENST00000511313 ROMO1P60602 79 aa4.63□□□□□ -1.67
POLR2J3-215ENST00000511313 KMT2CQ8NEZ4 4911 aaKnown RBP4.61□□□□□ -1.67
POLR2J3-215ENST00000511313 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
POLR2J3-215ENST00000511313 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
POLR2J3-215ENST00000511313 A8MU10 97 aa4.6□□□□□ -1.67
POLR2J3-215ENST00000511313 HECTD4Q9Y4D8 3996 aa4.6□□□□□ -1.67
POLR2J3-215ENST00000511313 PKD1P98161 4303 aa4.6□□□□□ -1.67
POLR2J3-215ENST00000511313 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
POLR2J3-215ENST00000511313 SACSQ9NZJ4 4579 aa4.58□□□□□ -1.68
POLR2J3-215ENST00000511313 KRTAP17-1Q9BYP8 105 aa4.57□□□□□ -1.68
POLR2J3-215ENST00000511313 RYR3Q15413 4870 aa4.56□□□□□ -1.68
POLR2J3-215ENST00000511313 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
POLR2J3-215ENST00000511313 DNAH5Q8TE73 4624 aa4.52□□□□□ -1.69
POLR2J3-215ENST00000511313 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
POLR2J3-215ENST00000511313 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
POLR2J3-215ENST00000511313 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
POLR2J3-215ENST00000511313 HERC1Q15751 4861 aa4.5□□□□□ -1.69
POLR2J3-215ENST00000511313 MT1HP80294 61 aa4.49□□□□□ -1.69
POLR2J3-215ENST00000511313 DNAH8Q96JB1 4490 aa4.47□□□□□ -1.69
POLR2J3-215ENST00000511313 RYR2Q92736 4967 aa4.46□□□□□ -1.69
POLR2J3-215ENST00000511313 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
POLR2J3-215ENST00000511313 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
POLR2J3-215ENST00000511313 RYR1P21817 5038 aa4.41□□□□□ -1.7
POLR2J3-215ENST00000511313 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
POLR2J3-215ENST00000511313 HSPG2P98160 4391 aa4.38□□□□□ -1.71
POLR2J3-215ENST00000511313 P0C880 135 aa4.37□□□□□ -1.71
POLR2J3-215ENST00000511313 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
POLR2J3-215ENST00000511313 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
POLR2J3-215ENST00000511313 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
POLR2J3-215ENST00000511313 PCLOQ9Y6V0 5065 aa4.35□□□□□ -1.71
POLR2J3-215ENST00000511313 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.72
POLR2J3-215ENST00000511313 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
POLR2J3-215ENST00000511313 APOBP04114 4563 aaKnown RBP4.32□□□□□ -1.72
POLR2J3-215ENST00000511313 HERC2O95714 4834 aa4.31□□□□□ -1.72
POLR2J3-215ENST00000511313 MT2AP02795 61 aa4.3□□□□□ -1.72
POLR2J3-215ENST00000511313 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
POLR2J3-215ENST00000511313 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
POLR2J3-215ENST00000511313 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
POLR2J3-215ENST00000511313 FAT1Q14517 4588 aa4.25□□□□□ -1.73
POLR2J3-215ENST00000511313 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
POLR2J3-215ENST00000511313 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
POLR2J3-215ENST00000511313 PKHD1L1Q86WI1 4243 aa4.24□□□□□ -1.73
POLR2J3-215ENST00000511313 KIAA1109Q2LD37 5005 aa4.23□□□□□ -1.73
POLR2J3-215ENST00000511313 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
POLR2J3-215ENST00000511313 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
POLR2J3-215ENST00000511313 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
POLR2J3-215ENST00000511313 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
POLR2J3-215ENST00000511313 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
POLR2J3-215ENST00000511313 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
POLR2J3-215ENST00000511313 KRTAP3-3Q9BYR6 98 aa4.16□□□□□ -1.74
POLR2J3-215ENST00000511313 MT1FP04733 61 aa4.12□□□□□ -1.75
POLR2J3-215ENST00000511313 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
POLR2J3-215ENST00000511313 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
POLR2J3-215ENST00000511313 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
POLR2J3-215ENST00000511313 TNXBP22105 4242 aa4.08□□□□□ -1.76
POLR2J3-215ENST00000511313 KRTAP3-2Q9BYR7 98 aa4.05□□□□□ -1.76
POLR2J3-215ENST00000511313 LCE2CQ5TA81 110 aa4.05□□□□□ -1.76
POLR2J3-215ENST00000511313 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
POLR2J3-215ENST00000511313 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
POLR2J3-215ENST00000511313 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
POLR2J3-215ENST00000511313 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
POLR2J3-215ENST00000511313 KRTAP12-2P59991 146 aa4□□□□□ -1.77
POLR2J3-215ENST00000511313 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
POLR2J3-215ENST00000511313 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
POLR2J3-215ENST00000511313 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
POLR2J3-215ENST00000511313 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
POLR2J3-215ENST00000511313 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
POLR2J3-215ENST00000511313 LPAP08519 4548 aa3.9□□□□□ -1.78
POLR2J3-215ENST00000511313 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
POLR2J3-215ENST00000511313 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
POLR2J3-215ENST00000511313 SPRR2EP22531 72 aa3.88□□□□□ -1.79
POLR2J3-215ENST00000511313 SPRR2BP35325 72 aa3.88□□□□□ -1.79
POLR2J3-215ENST00000511313 SPRR2AP35326 72 aa3.88□□□□□ -1.79
POLR2J3-215ENST00000511313 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
POLR2J3-215ENST00000511313 LCE2BO14633 110 aa3.88□□□□□ -1.79
POLR2J3-215ENST00000511313 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
POLR2J3-215ENST00000511313 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
POLR2J3-215ENST00000511313 SPRR2DP22532 72 aa3.82□□□□□ -1.8
POLR2J3-215ENST00000511313 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
POLR2J3-215ENST00000511313 MT1BP07438 61 aa3.79□□□□□ -1.8
POLR2J3-215ENST00000511313 MUC2Q02817 5179 aa3.72□□□□□ -1.81
POLR2J3-215ENST00000511313 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
POLR2J3-215ENST00000511313 LRP2P98164 4655 aa3.71□□□□□ -1.81
POLR2J3-215ENST00000511313 LCE3AQ5TA76 89 aa3.71□□□□□ -1.81
POLR2J3-215ENST00000511313 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
POLR2J3-215ENST00000511313 MT1GP13640 62 aa3.69□□□□□ -1.82
POLR2J3-215ENST00000511313 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
POLR2J3-215ENST00000511313 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
POLR2J3-215ENST00000511313 INE1O15225 51 aa3.66□□□□□ -1.82
POLR2J3-215ENST00000511313 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.82
POLR2J3-215ENST00000511313 MT1XP80297 61 aa3.65□□□□□ -1.82
POLR2J3-215ENST00000511313 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.82
POLR2J3-215ENST00000511313 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
POLR2J3-215ENST00000511313 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
POLR2J3-215ENST00000511313 RNF213Q63HN8 5207 aa3.59□□□□□ -1.84
POLR2J3-215ENST00000511313 FLGP20930 4061 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms