RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
SNF8-206ENST00000509989 ATOX1O00244 68 aa6.17□□□□□ -1.42
SNF8-206ENST00000509989 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
SNF8-206ENST00000509989 FAM236AA0A1B0GUQ0 79 aa6.15□□□□□ -1.42
SNF8-206ENST00000509989 FAM236BA0A1B0GV22 79 aa6.15□□□□□ -1.42
SNF8-206ENST00000509989 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
SNF8-206ENST00000509989 MT1BP07438 61 aa6.1□□□□□ -1.43
SNF8-206ENST00000509989 MP68P56378 58 aa6.1□□□□□ -1.43
SNF8-206ENST00000509989 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
SNF8-206ENST00000509989 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
SNF8-206ENST00000509989 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
SNF8-206ENST00000509989 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
SNF8-206ENST00000509989 NDUFC1O43677 76 aa6.02□□□□□ -1.45
SNF8-206ENST00000509989 A8MUN3 132 aa6.01□□□□□ -1.45
SNF8-206ENST00000509989 H3BPC8 53 aa6□□□□□ -1.45
SNF8-206ENST00000509989 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
SNF8-206ENST00000509989 Q5VV11 94 aa5.97□□□□□ -1.45
SNF8-206ENST00000509989 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
SNF8-206ENST00000509989 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
SNF8-206ENST00000509989 DMAC1Q96GE9 116 aa5.96□□□□□ -1.46
SNF8-206ENST00000509989 H0YAA0 97 aa5.94□□□□□ -1.46
SNF8-206ENST00000509989 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
SNF8-206ENST00000509989 ANAPC13Q9BS18 74 aa5.93□□□□□ -1.46
SNF8-206ENST00000509989 P0C880 135 aa5.9□□□□□ -1.46
SNF8-206ENST00000509989 COX7CP15954 63 aa5.9□□□□□ -1.46
SNF8-206ENST00000509989 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
SNF8-206ENST00000509989 SNURFQ9Y675 71 aa5.9□□□□□ -1.46
SNF8-206ENST00000509989 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
SNF8-206ENST00000509989 A6NN06 94 aa5.88□□□□□ -1.47
SNF8-206ENST00000509989 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
SNF8-206ENST00000509989 C20orf197Q8N268 126 aa5.86□□□□□ -1.47
SNF8-206ENST00000509989 ACYP2P14621 99 aa5.78□□□□□ -1.48
SNF8-206ENST00000509989 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
SNF8-206ENST00000509989 M0QZ58 72 aa5.75□□□□□ -1.49
SNF8-206ENST00000509989 R4GN34 69 aa5.74□□□□□ -1.49
SNF8-206ENST00000509989 MT1XP80297 61 aa5.73□□□□□ -1.49
SNF8-206ENST00000509989 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
SNF8-206ENST00000509989 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
SNF8-206ENST00000509989 CYSTM1Q9H1C7 97 aa5.7□□□□□ -1.5
SNF8-206ENST00000509989 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
SNF8-206ENST00000509989 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
SNF8-206ENST00000509989 H7BZZ5 65 aa5.66□□□□□ -1.5
SNF8-206ENST00000509989 PCP4P48539 62 aa5.65□□□□□ -1.5
SNF8-206ENST00000509989 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
SNF8-206ENST00000509989 KMT2DO14686 5537 aa5.65□□□□□ -1.51
SNF8-206ENST00000509989 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
SNF8-206ENST00000509989 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
SNF8-206ENST00000509989 SPTSSBQ8NFR3 76 aa5.62□□□□□ -1.51
SNF8-206ENST00000509989 TMEM258P61165 79 aa5.6□□□□□ -1.51
SNF8-206ENST00000509989 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
SNF8-206ENST00000509989 COA5Q86WW8 74 aa5.59□□□□□ -1.51
SNF8-206ENST00000509989 NEBP20929 6669 aa5.56□□□□□ -1.52
SNF8-206ENST00000509989 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
SNF8-206ENST00000509989 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
SNF8-206ENST00000509989 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
SNF8-206ENST00000509989 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
SNF8-206ENST00000509989 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
SNF8-206ENST00000509989 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
SNF8-206ENST00000509989 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
SNF8-206ENST00000509989 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
SNF8-206ENST00000509989 SERP1Q9Y6X1 66 aa5.43□□□□□ -1.54
SNF8-206ENST00000509989 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
SNF8-206ENST00000509989 SEC61GP60059 68 aa5.41□□□□□ -1.54
SNF8-206ENST00000509989 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
SNF8-206ENST00000509989 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
SNF8-206ENST00000509989 A0A0D9SG42 100 aa5.36□□□□□ -1.55
SNF8-206ENST00000509989 SPRR2EP22531 72 aa5.33□□□□□ -1.56
SNF8-206ENST00000509989 SPRR2BP35325 72 aa5.33□□□□□ -1.56
SNF8-206ENST00000509989 SPRR2AP35326 72 aa5.33□□□□□ -1.56
SNF8-206ENST00000509989 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
SNF8-206ENST00000509989 A0A1B0GU33 70 aa5.32□□□□□ -1.56
SNF8-206ENST00000509989 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
SNF8-206ENST00000509989 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
SNF8-206ENST00000509989 V9GYY9 64 aa5.3□□□□□ -1.56
SNF8-206ENST00000509989 A0A1B0GU69 56 aa5.29□□□□□ -1.56
SNF8-206ENST00000509989 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
SNF8-206ENST00000509989 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
SNF8-206ENST00000509989 SMIM26A0A096LP01 95 aa5.27□□□□□ -1.57
SNF8-206ENST00000509989 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
SNF8-206ENST00000509989 A8MU10 97 aa5.25□□□□□ -1.57
SNF8-206ENST00000509989 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
SNF8-206ENST00000509989 LINC01558Q9Y6Z2 57 aa5.25□□□□□ -1.57
SNF8-206ENST00000509989 Q1T7F1 81 aa5.2□□□□□ -1.58
SNF8-206ENST00000509989 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
SNF8-206ENST00000509989 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
SNF8-206ENST00000509989 SPRR2DP22532 72 aa5.14□□□□□ -1.59
SNF8-206ENST00000509989 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
SNF8-206ENST00000509989 UQCR11O14957 56 aa5.1□□□□□ -1.59
SNF8-206ENST00000509989 PSPHP1O15172 72 aa5.09□□□□□ -1.59
SNF8-206ENST00000509989 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
SNF8-206ENST00000509989 MT1EP04732 61 aa5.05□□□□□ -1.6
SNF8-206ENST00000509989 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
SNF8-206ENST00000509989 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
SNF8-206ENST00000509989 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
SNF8-206ENST00000509989 A6NED7 52 aa5□□□□□ -1.61
SNF8-206ENST00000509989 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
SNF8-206ENST00000509989 LCE3BQ5TA77 95 aa5□□□□□ -1.61
SNF8-206ENST00000509989 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
SNF8-206ENST00000509989 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
SNF8-206ENST00000509989 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms