RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
HTT-207ENST00000509751 KLKP1Q107X0 134 aa7.09□□□□□ -1.27
HTT-207ENST00000509751 CSAG1Q6PB30 78 aa7.07□□□□□ -1.28
HTT-207ENST00000509751 FAM236AA0A1B0GUQ0 79 aa7.03□□□□□ -1.28
HTT-207ENST00000509751 FAM236BA0A1B0GV22 79 aa7.03□□□□□ -1.28
HTT-207ENST00000509751 SSPOA2VEC9 5147 aa7□□□□□ -1.29
HTT-207ENST00000509751 H3BPC8 53 aa7□□□□□ -1.29
HTT-207ENST00000509751 SMIM20Q8N5G0 67 aa6.99□□□□□ -1.29
HTT-207ENST00000509751 A8MUN3 132 aa6.96□□□□□ -1.3
HTT-207ENST00000509751 TRAV7A0A075B6U4 112 aa6.93□□□□□ -1.3
HTT-207ENST00000509751 NDUFC1O43677 76 aa6.93□□□□□ -1.3
HTT-207ENST00000509751 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
HTT-207ENST00000509751 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
HTT-207ENST00000509751 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
HTT-207ENST00000509751 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
HTT-207ENST00000509751 SERP2Q8N6R1 65 aa6.81□□□□□ -1.32
HTT-207ENST00000509751 FCGBPQ9Y6R7 5405 aaPredicted RBP6.81□□□□□ -1.32
HTT-207ENST00000509751 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
HTT-207ENST00000509751 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
HTT-207ENST00000509751 KRTAP19-6Q3LI70 58 aa6.78□□□□□ -1.32
HTT-207ENST00000509751 C20orf197Q8N268 126 aa6.78□□□□□ -1.32
HTT-207ENST00000509751 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
HTT-207ENST00000509751 H0YAA0 97 aa6.77□□□□□ -1.33
HTT-207ENST00000509751 Q5VV11 94 aa6.74□□□□□ -1.33
HTT-207ENST00000509751 ACYP2P14621 99 aa6.73□□□□□ -1.33
HTT-207ENST00000509751 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
HTT-207ENST00000509751 MT1BP07438 61 aa6.72□□□□□ -1.33
HTT-207ENST00000509751 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
HTT-207ENST00000509751 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
HTT-207ENST00000509751 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.34
HTT-207ENST00000509751 COX7CP15954 63 aa6.69□□□□□ -1.34
HTT-207ENST00000509751 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
HTT-207ENST00000509751 P0C880 135 aa6.66□□□□□ -1.34
HTT-207ENST00000509751 KRTAP4-12Q9BQ66 201 aa6.65□□□□□ -1.34
HTT-207ENST00000509751 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
HTT-207ENST00000509751 SPANXA2-OT1Q8N9U9 137 aa6.63□□□□□ -1.35
HTT-207ENST00000509751 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
HTT-207ENST00000509751 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
HTT-207ENST00000509751 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
HTT-207ENST00000509751 A6NN06 94 aa6.59□□□□□ -1.35
HTT-207ENST00000509751 R4GN34 69 aa6.58□□□□□ -1.36
HTT-207ENST00000509751 M0QZ58 72 aa6.56□□□□□ -1.36
HTT-207ENST00000509751 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
HTT-207ENST00000509751 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
HTT-207ENST00000509751 KRTAP10-5P60370 271 aa6.51□□□□□ -1.37
HTT-207ENST00000509751 COA5Q86WW8 74 aa6.5□□□□□ -1.37
HTT-207ENST00000509751 H7BZZ5 65 aa6.49□□□□□ -1.37
HTT-207ENST00000509751 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
HTT-207ENST00000509751 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
HTT-207ENST00000509751 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
HTT-207ENST00000509751 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
HTT-207ENST00000509751 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
HTT-207ENST00000509751 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
HTT-207ENST00000509751 MT1XP80297 61 aa6.35□□□□□ -1.39
HTT-207ENST00000509751 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
HTT-207ENST00000509751 ATP5EP56381 51 aaPredicted RBP6.33□□□□□ -1.4
HTT-207ENST00000509751 KRTAP6-3Q3LI67 103 aa6.31□□□□□ -1.4
HTT-207ENST00000509751 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
HTT-207ENST00000509751 SEC61GP60059 68 aa6.29□□□□□ -1.4
HTT-207ENST00000509751 SERP1Q9Y6X1 66 aa6.28□□□□□ -1.4
HTT-207ENST00000509751 TMEM258P61165 79 aa6.27□□□□□ -1.41
HTT-207ENST00000509751 KRTAP9-9Q9BYP9 154 aa6.27□□□□□ -1.41
HTT-207ENST00000509751 KRTAP9-4Q9BYQ2 154 aa6.27□□□□□ -1.41
HTT-207ENST00000509751 A0A0D9SG42 100 aa6.18□□□□□ -1.42
HTT-207ENST00000509751 A0A1B0GU33 70 aa6.17□□□□□ -1.42
HTT-207ENST00000509751 SPATA8Q6RVD6 105 aa6.17□□□□□ -1.42
HTT-207ENST00000509751 A0A1B0GU69 56 aa6.15□□□□□ -1.42
HTT-207ENST00000509751 KMT2DO14686 5537 aa6.12□□□□□ -1.43
HTT-207ENST00000509751 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
HTT-207ENST00000509751 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
HTT-207ENST00000509751 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
HTT-207ENST00000509751 PCP4P48539 62 aa6.09□□□□□ -1.43
HTT-207ENST00000509751 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
HTT-207ENST00000509751 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
HTT-207ENST00000509751 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
HTT-207ENST00000509751 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
HTT-207ENST00000509751 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
HTT-207ENST00000509751 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
HTT-207ENST00000509751 PRR15LQ9BU68 103 aa6.04□□□□□ -1.44
HTT-207ENST00000509751 NEBP20929 6669 aa6.02□□□□□ -1.45
HTT-207ENST00000509751 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
HTT-207ENST00000509751 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
HTT-207ENST00000509751 KRTAP10-12P60413 245 aa6□□□□□ -1.45
HTT-207ENST00000509751 A8MU10 97 aa5.99□□□□□ -1.45
HTT-207ENST00000509751 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
HTT-207ENST00000509751 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
HTT-207ENST00000509751 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
HTT-207ENST00000509751 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
HTT-207ENST00000509751 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
HTT-207ENST00000509751 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
HTT-207ENST00000509751 V9GYY9 64 aa5.91□□□□□ -1.46
HTT-207ENST00000509751 SPRR2EP22531 72 aa5.89□□□□□ -1.47
HTT-207ENST00000509751 SPRR2BP35325 72 aa5.89□□□□□ -1.47
HTT-207ENST00000509751 SPRR2AP35326 72 aa5.89□□□□□ -1.47
HTT-207ENST00000509751 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
HTT-207ENST00000509751 Q1T7F1 81 aa5.85□□□□□ -1.47
HTT-207ENST00000509751 UQCR11O14957 56 aa5.83□□□□□ -1.48
HTT-207ENST00000509751 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
HTT-207ENST00000509751 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
HTT-207ENST00000509751 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms