RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CSAG1Q6PB30 78 aa7.46□□□□□ -1.22
PDLIM5-212ENST00000509333 LCA10Q71F78 164 aa7.46□□□□□ -1.22
PDLIM5-212ENST00000509333 A0A087WVE0 104 aa7.45□□□□□ -1.22
PDLIM5-212ENST00000509333 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
PDLIM5-212ENST00000509333 H0Y9P7 68 aa7.4□□□□□ -1.22
PDLIM5-212ENST00000509333 ATOX1O00244 68 aa7.38□□□□□ -1.23
PDLIM5-212ENST00000509333 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
PDLIM5-212ENST00000509333 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
PDLIM5-212ENST00000509333 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
PDLIM5-212ENST00000509333 J3QR89 54 aa7.33□□□□□ -1.24
PDLIM5-212ENST00000509333 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
PDLIM5-212ENST00000509333 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
PDLIM5-212ENST00000509333 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
PDLIM5-212ENST00000509333 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
PDLIM5-212ENST00000509333 LCE4AQ5TA78 99 aa7.28□□□□□ -1.24
PDLIM5-212ENST00000509333 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
PDLIM5-212ENST00000509333 MP68P56378 58 aa7.26□□□□□ -1.25
PDLIM5-212ENST00000509333 A8MUN3 132 aa7.23□□□□□ -1.25
PDLIM5-212ENST00000509333 KRTAP19-8Q3LI54 63 aa7.23□□□□□ -1.25
PDLIM5-212ENST00000509333 NDUFC1O43677 76 aa7.22□□□□□ -1.25
PDLIM5-212ENST00000509333 MT1BP07438 61 aa7.22□□□□□ -1.25
PDLIM5-212ENST00000509333 IMUPQ9GZP8 106 aa7.2□□□□□ -1.26
PDLIM5-212ENST00000509333 KRTAP4-2Q9BYR5 136 aa7.19□□□□□ -1.26
PDLIM5-212ENST00000509333 H3BPC8 53 aa7.18□□□□□ -1.26
PDLIM5-212ENST00000509333 SCGB1A1P11684 91 aa7.18□□□□□ -1.26
PDLIM5-212ENST00000509333 Q5VV11 94 aa7.17□□□□□ -1.26
PDLIM5-212ENST00000509333 MACF1Q9UPN3 7388 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-212ENST00000509333 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
PDLIM5-212ENST00000509333 H0YAA0 97 aa7.15□□□□□ -1.26
PDLIM5-212ENST00000509333 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
PDLIM5-212ENST00000509333 K7ERU9 68 aa7.09□□□□□ -1.27
PDLIM5-212ENST00000509333 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-212ENST00000509333 ADM2Q7Z4H4 148 aa7.07□□□□□ -1.28
PDLIM5-212ENST00000509333 A6NN06 94 aa7.06□□□□□ -1.28
PDLIM5-212ENST00000509333 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
PDLIM5-212ENST00000509333 KRTAP4-11Q9BYQ6 195 aa7.04□□□□□ -1.28
PDLIM5-212ENST00000509333 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
PDLIM5-212ENST00000509333 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
PDLIM5-212ENST00000509333 KRTAP6-3Q3LI67 103 aa7□□□□□ -1.29
PDLIM5-212ENST00000509333 SMIM20Q8N5G0 67 aa7□□□□□ -1.29
PDLIM5-212ENST00000509333 P0C880 135 aa6.95□□□□□ -1.3
PDLIM5-212ENST00000509333 ACYP2P14621 99 aa6.93□□□□□ -1.3
PDLIM5-212ENST00000509333 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
PDLIM5-212ENST00000509333 LCE5AQ5TCM9 118 aa6.88□□□□□ -1.31
PDLIM5-212ENST00000509333 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
PDLIM5-212ENST00000509333 SNURFQ9Y675 71 aa6.86□□□□□ -1.31
PDLIM5-212ENST00000509333 R4GN34 69 aa6.85□□□□□ -1.31
PDLIM5-212ENST00000509333 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
PDLIM5-212ENST00000509333 M0QZ58 72 aa6.8□□□□□ -1.32
PDLIM5-212ENST00000509333 SERP2Q8N6R1 65 aa6.8□□□□□ -1.32
PDLIM5-212ENST00000509333 MT1XP80297 61 aa6.78□□□□□ -1.32
PDLIM5-212ENST00000509333 H3BS24 57 aa6.77□□□□□ -1.33
PDLIM5-212ENST00000509333 SPANXA2-OT1Q8N9U9 137 aa6.77□□□□□ -1.33
PDLIM5-212ENST00000509333 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
PDLIM5-212ENST00000509333 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
PDLIM5-212ENST00000509333 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
PDLIM5-212ENST00000509333 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
PDLIM5-212ENST00000509333 KRTAP5-9P26371 169 aa6.7□□□□□ -1.34
PDLIM5-212ENST00000509333 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
PDLIM5-212ENST00000509333 NEBP20929 6669 aa6.65□□□□□ -1.35
PDLIM5-212ENST00000509333 KMT2DO14686 5537 aa6.63□□□□□ -1.35
PDLIM5-212ENST00000509333 COX7CP15954 63 aa6.6□□□□□ -1.35
PDLIM5-212ENST00000509333 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
PDLIM5-212ENST00000509333 COA5Q86WW8 74 aa6.55□□□□□ -1.36
PDLIM5-212ENST00000509333 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
PDLIM5-212ENST00000509333 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
PDLIM5-212ENST00000509333 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
PDLIM5-212ENST00000509333 H7BZZ5 65 aa6.5□□□□□ -1.37
PDLIM5-212ENST00000509333 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
PDLIM5-212ENST00000509333 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
PDLIM5-212ENST00000509333 KRTAP10-7P60409 375 aaPredicted RBP6.47□□□□□ -1.37
PDLIM5-212ENST00000509333 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
PDLIM5-212ENST00000509333 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
PDLIM5-212ENST00000509333 KRTAP20-1Q3LI63 56 aa6.4□□□□□ -1.38
PDLIM5-212ENST00000509333 SERP1Q9Y6X1 66 aa6.4□□□□□ -1.38
PDLIM5-212ENST00000509333 SEC61GP60059 68 aa6.39□□□□□ -1.39
PDLIM5-212ENST00000509333 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
PDLIM5-212ENST00000509333 SPRR2EP22531 72 aa6.36□□□□□ -1.39
PDLIM5-212ENST00000509333 SPRR2BP35325 72 aa6.36□□□□□ -1.39
PDLIM5-212ENST00000509333 SPRR2AP35326 72 aa6.36□□□□□ -1.39
PDLIM5-212ENST00000509333 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
PDLIM5-212ENST00000509333 A0A1B0GU33 70 aa6.33□□□□□ -1.4
PDLIM5-212ENST00000509333 KRTAP2-3P0C7H8 128 aa6.31□□□□□ -1.4
PDLIM5-212ENST00000509333 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
PDLIM5-212ENST00000509333 KRTAP2-4Q9BYR9 128 aa6.31□□□□□ -1.4
PDLIM5-212ENST00000509333 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
PDLIM5-212ENST00000509333 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
PDLIM5-212ENST00000509333 A0A0D9SG42 100 aa6.28□□□□□ -1.4
PDLIM5-212ENST00000509333 A0A1B0GU69 56 aa6.2□□□□□ -1.42
PDLIM5-212ENST00000509333 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
PDLIM5-212ENST00000509333 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
PDLIM5-212ENST00000509333 SPRR2DP22532 72 aa6.14□□□□□ -1.43
PDLIM5-212ENST00000509333 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
PDLIM5-212ENST00000509333 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-212ENST00000509333 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
PDLIM5-212ENST00000509333 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
PDLIM5-212ENST00000509333 A8MU10 97 aa6.1□□□□□ -1.43
PDLIM5-212ENST00000509333 KRTAP19-7Q3SYF9 63 aa6.08□□□□□ -1.44
PDLIM5-212ENST00000509333 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
PDLIM5-212ENST00000509333 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 244.9 ms