RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
UBE2D3-223ENST00000508249 A0A087WVE0 104 aa4.36□□□□□ -1.71
UBE2D3-223ENST00000508249 H0Y9P7 68 aa4.36□□□□□ -1.71
UBE2D3-223ENST00000508249 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
UBE2D3-223ENST00000508249 K7ERU9 68 aa4.35□□□□□ -1.71
UBE2D3-223ENST00000508249 MP68P56378 58 aa4.35□□□□□ -1.71
UBE2D3-223ENST00000508249 S4R3F8 94 aa4.35□□□□□ -1.71
UBE2D3-223ENST00000508249 IMUPQ9GZP8 106 aa4.34□□□□□ -1.71
UBE2D3-223ENST00000508249 H3BPC8 53 aa4.33□□□□□ -1.72
UBE2D3-223ENST00000508249 A8MUN3 132 aa4.32□□□□□ -1.72
UBE2D3-223ENST00000508249 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
UBE2D3-223ENST00000508249 CSAG1Q6PB30 78 aa4.32□□□□□ -1.72
UBE2D3-223ENST00000508249 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
UBE2D3-223ENST00000508249 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
UBE2D3-223ENST00000508249 SCGB1A1P11684 91 aa4.3□□□□□ -1.72
UBE2D3-223ENST00000508249 LINC00208Q96KT6 92 aa4.29□□□□□ -1.72
UBE2D3-223ENST00000508249 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
UBE2D3-223ENST00000508249 LCA10Q71F78 164 aa4.28□□□□□ -1.72
UBE2D3-223ENST00000508249 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
UBE2D3-223ENST00000508249 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
UBE2D3-223ENST00000508249 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
UBE2D3-223ENST00000508249 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
UBE2D3-223ENST00000508249 NDUFC1O43677 76 aa4.23□□□□□ -1.73
UBE2D3-223ENST00000508249 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
UBE2D3-223ENST00000508249 MT1BP07438 61 aa4.21□□□□□ -1.74
UBE2D3-223ENST00000508249 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
UBE2D3-223ENST00000508249 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
UBE2D3-223ENST00000508249 A6NN06 94 aa4.2□□□□□ -1.74
UBE2D3-223ENST00000508249 H0YAA0 97 aa4.19□□□□□ -1.74
UBE2D3-223ENST00000508249 CRIPTQ9P021 101 aa4.19□□□□□ -1.74
UBE2D3-223ENST00000508249 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
UBE2D3-223ENST00000508249 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
UBE2D3-223ENST00000508249 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
UBE2D3-223ENST00000508249 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
UBE2D3-223ENST00000508249 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
UBE2D3-223ENST00000508249 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
UBE2D3-223ENST00000508249 ACYP2P14621 99 aa4.11□□□□□ -1.75
UBE2D3-223ENST00000508249 C20orf197Q8N268 126 aa4.11□□□□□ -1.75
UBE2D3-223ENST00000508249 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
UBE2D3-223ENST00000508249 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
UBE2D3-223ENST00000508249 Q5VV11 94 aa4.1□□□□□ -1.75
UBE2D3-223ENST00000508249 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
UBE2D3-223ENST00000508249 SPRR2EP22531 72 aa4.09□□□□□ -1.75
UBE2D3-223ENST00000508249 SPRR2BP35325 72 aa4.09□□□□□ -1.75
UBE2D3-223ENST00000508249 SPRR2AP35326 72 aa4.09□□□□□ -1.75
UBE2D3-223ENST00000508249 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
UBE2D3-223ENST00000508249 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
UBE2D3-223ENST00000508249 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
UBE2D3-223ENST00000508249 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
UBE2D3-223ENST00000508249 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
UBE2D3-223ENST00000508249 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
UBE2D3-223ENST00000508249 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
UBE2D3-223ENST00000508249 CHKB-CPT1BH3BT56 60 aa4.03□□□□□ -1.76
UBE2D3-223ENST00000508249 COX7CP15954 63 aa4□□□□□ -1.77
UBE2D3-223ENST00000508249 R4GN34 69 aa4□□□□□ -1.77
UBE2D3-223ENST00000508249 H3BS24 57 aa3.97□□□□□ -1.77
UBE2D3-223ENST00000508249 P0C880 135 aa3.96□□□□□ -1.78
UBE2D3-223ENST00000508249 M0QZ58 72 aa3.95□□□□□ -1.78
UBE2D3-223ENST00000508249 SPRR2DP22532 72 aa3.95□□□□□ -1.78
UBE2D3-223ENST00000508249 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
UBE2D3-223ENST00000508249 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
UBE2D3-223ENST00000508249 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
UBE2D3-223ENST00000508249 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
UBE2D3-223ENST00000508249 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
UBE2D3-223ENST00000508249 COA5Q86WW8 74 aa3.9□□□□□ -1.79
UBE2D3-223ENST00000508249 ANAPC13Q9BS18 74 aa3.9□□□□□ -1.79
UBE2D3-223ENST00000508249 H7BZZ5 65 aa3.89□□□□□ -1.79
UBE2D3-223ENST00000508249 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
UBE2D3-223ENST00000508249 SEC61GP60059 68 aa3.86□□□□□ -1.79
UBE2D3-223ENST00000508249 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
UBE2D3-223ENST00000508249 SERP1Q9Y6X1 66 aa3.84□□□□□ -1.79
UBE2D3-223ENST00000508249 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-223ENST00000508249 MT1XP80297 61 aa3.83□□□□□ -1.8
UBE2D3-223ENST00000508249 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-223ENST00000508249 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
UBE2D3-223ENST00000508249 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
UBE2D3-223ENST00000508249 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
UBE2D3-223ENST00000508249 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
UBE2D3-223ENST00000508249 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
UBE2D3-223ENST00000508249 CCDC179H3BU77 68 aa3.76□□□□□ -1.81
UBE2D3-223ENST00000508249 A0A1B0GU33 70 aa3.73□□□□□ -1.81
UBE2D3-223ENST00000508249 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
UBE2D3-223ENST00000508249 A0A1B0GU69 56 aa3.72□□□□□ -1.81
UBE2D3-223ENST00000508249 TMEM258P61165 79 aa3.72□□□□□ -1.81
UBE2D3-223ENST00000508249 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
UBE2D3-223ENST00000508249 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
UBE2D3-223ENST00000508249 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
UBE2D3-223ENST00000508249 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
UBE2D3-223ENST00000508249 SMIM26A0A096LP01 95 aa3.68□□□□□ -1.82
UBE2D3-223ENST00000508249 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
UBE2D3-223ENST00000508249 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
UBE2D3-223ENST00000508249 A0A0D9SG42 100 aa3.65□□□□□ -1.83
UBE2D3-223ENST00000508249 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
UBE2D3-223ENST00000508249 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
UBE2D3-223ENST00000508249 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
UBE2D3-223ENST00000508249 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
UBE2D3-223ENST00000508249 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
UBE2D3-223ENST00000508249 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
UBE2D3-223ENST00000508249 KRTAP12-1P59990 96 aa3.59□□□□□ -1.83
UBE2D3-223ENST00000508249 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms