RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
PPARGC1A-204ENST00000506055 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
PPARGC1A-204ENST00000506055 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
PPARGC1A-204ENST00000506055 RYR2Q92736 4967 aa4.04□□□□□ -1.76
PPARGC1A-204ENST00000506055 H0YAA0 97 aa4.03□□□□□ -1.76
PPARGC1A-204ENST00000506055 A0A1B0GU33 70 aa4.02□□□□□ -1.77
PPARGC1A-204ENST00000506055 FLG2Q5D862 2391 aaPredicted RBP4.02□□□□□ -1.77
PPARGC1A-204ENST00000506055 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
PPARGC1A-204ENST00000506055 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
PPARGC1A-204ENST00000506055 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
PPARGC1A-204ENST00000506055 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
PPARGC1A-204ENST00000506055 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
PPARGC1A-204ENST00000506055 Q5VSD8 79 aa3.97□□□□□ -1.77
PPARGC1A-204ENST00000506055 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
PPARGC1A-204ENST00000506055 TNXBP22105 4242 aa3.96□□□□□ -1.78
PPARGC1A-204ENST00000506055 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
PPARGC1A-204ENST00000506055 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
PPARGC1A-204ENST00000506055 HSPG2P98160 4391 aa3.95□□□□□ -1.78
PPARGC1A-204ENST00000506055 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
PPARGC1A-204ENST00000506055 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
PPARGC1A-204ENST00000506055 RPL37P61927 97 aaKnown RBP3.93□□□□□ -1.78
PPARGC1A-204ENST00000506055 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
PPARGC1A-204ENST00000506055 KRTAP17-1Q9BYP8 105 aa3.91□□□□□ -1.78
PPARGC1A-204ENST00000506055 MYCBP2O75592 4640 aa3.9□□□□□ -1.78
PPARGC1A-204ENST00000506055 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
PPARGC1A-204ENST00000506055 K7ERS5 55 aa3.89□□□□□ -1.79
PPARGC1A-204ENST00000506055 S4R3F8 94 aa3.89□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
PPARGC1A-204ENST00000506055 A0A0D9SG42 100 aa3.87□□□□□ -1.79
PPARGC1A-204ENST00000506055 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
PPARGC1A-204ENST00000506055 KIAA1109Q2LD37 5005 aa3.86□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
PPARGC1A-204ENST00000506055 LPAP08519 4548 aa3.85□□□□□ -1.79
PPARGC1A-204ENST00000506055 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
PPARGC1A-204ENST00000506055 P0C880 135 aa3.83□□□□□ -1.8
PPARGC1A-204ENST00000506055 RYR1P21817 5038 aa3.83□□□□□ -1.8
PPARGC1A-204ENST00000506055 BIRC6Q9NR09 4857 aa3.81□□□□□ -1.8
PPARGC1A-204ENST00000506055 ROMO1P60602 79 aa3.79□□□□□ -1.8
PPARGC1A-204ENST00000506055 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
PPARGC1A-204ENST00000506055 LRP2P98164 4655 aa3.78□□□□□ -1.8
PPARGC1A-204ENST00000506055 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
PPARGC1A-204ENST00000506055 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
PPARGC1A-204ENST00000506055 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
PPARGC1A-204ENST00000506055 KRTAP4-5Q9BYR2 181 aa3.74□□□□□ -1.81
PPARGC1A-204ENST00000506055 SPINT4Q6UDR6 99 aa3.73□□□□□ -1.81
PPARGC1A-204ENST00000506055 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
PPARGC1A-204ENST00000506055 HERC2O95714 4834 aa3.71□□□□□ -1.82
PPARGC1A-204ENST00000506055 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
PPARGC1A-204ENST00000506055 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
PPARGC1A-204ENST00000506055 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
PPARGC1A-204ENST00000506055 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
PPARGC1A-204ENST00000506055 M0QZ58 72 aa3.68□□□□□ -1.82
PPARGC1A-204ENST00000506055 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 R4GN34 69 aa3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 H3BS24 57 aa3.6□□□□□ -1.83
PPARGC1A-204ENST00000506055 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
PPARGC1A-204ENST00000506055 HERC1Q15751 4861 aa3.6□□□□□ -1.83
PPARGC1A-204ENST00000506055 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
PPARGC1A-204ENST00000506055 MUC2Q02817 5179 aa3.56□□□□□ -1.84
PPARGC1A-204ENST00000506055 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
PPARGC1A-204ENST00000506055 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
PPARGC1A-204ENST00000506055 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
PPARGC1A-204ENST00000506055 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
PPARGC1A-204ENST00000506055 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
PPARGC1A-204ENST00000506055 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
PPARGC1A-204ENST00000506055 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
PPARGC1A-204ENST00000506055 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
PPARGC1A-204ENST00000506055 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
PPARGC1A-204ENST00000506055 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
PPARGC1A-204ENST00000506055 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
PPARGC1A-204ENST00000506055 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
PPARGC1A-204ENST00000506055 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
PPARGC1A-204ENST00000506055 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.87
PPARGC1A-204ENST00000506055 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
PPARGC1A-204ENST00000506055 M0R2T5 61 aa3.29□□□□□ -1.88
PPARGC1A-204ENST00000506055 TNP1P09430 55 aa3.29□□□□□ -1.88
PPARGC1A-204ENST00000506055 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
PPARGC1A-204ENST00000506055 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
PPARGC1A-204ENST00000506055 MT1HP80294 61 aa3.22□□□□□ -1.89
PPARGC1A-204ENST00000506055 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
PPARGC1A-204ENST00000506055 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
PPARGC1A-204ENST00000506055 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
PPARGC1A-204ENST00000506055 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
PPARGC1A-204ENST00000506055 MT1FP04733 61 aa3.18□□□□□ -1.9
PPARGC1A-204ENST00000506055 MT2AP02795 61 aa3.17□□□□□ -1.9
PPARGC1A-204ENST00000506055 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
PPARGC1A-204ENST00000506055 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
PPARGC1A-204ENST00000506055 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
PPARGC1A-204ENST00000506055 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
PPARGC1A-204ENST00000506055 MT1BP07438 61 aa3.06□□□□□ -1.92
PPARGC1A-204ENST00000506055 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
PPARGC1A-204ENST00000506055 MT1XP80297 61 aa3.05□□□□□ -1.92
PPARGC1A-204ENST00000506055 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
PPARGC1A-204ENST00000506055 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
PPARGC1A-204ENST00000506055 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms