RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 MT1FP04733 61 aa8.59□□□□□ -1.03
DDR1-254ENST00000504679 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
DDR1-254ENST00000504679 NDUFC1O43677 76 aa8.58□□□□□ -1.04
DDR1-254ENST00000504679 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
DDR1-254ENST00000504679 COX7CP15954 63 aa8.55□□□□□ -1.04
DDR1-254ENST00000504679 ACYP2P14621 99 aa8.51□□□□□ -1.05
DDR1-254ENST00000504679 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
DDR1-254ENST00000504679 SPANXA2-OT1Q8N9U9 137 aa8.46□□□□□ -1.06
DDR1-254ENST00000504679 ANAPC13Q9BS18 74 aa8.46□□□□□ -1.06
DDR1-254ENST00000504679 H0YAA0 97 aa8.36□□□□□ -1.07
DDR1-254ENST00000504679 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
DDR1-254ENST00000504679 LCE2BO14633 110 aa8.34□□□□□ -1.07
DDR1-254ENST00000504679 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
DDR1-254ENST00000504679 FSIP2Q5CZC0 6907 aa8.31□□□□□ -1.08
DDR1-254ENST00000504679 H7BZZ5 65 aa8.3□□□□□ -1.08
DDR1-254ENST00000504679 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
DDR1-254ENST00000504679 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
DDR1-254ENST00000504679 CYSTM1Q9H1C7 97 aa8.28□□□□□ -1.08
DDR1-254ENST00000504679 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
DDR1-254ENST00000504679 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
DDR1-254ENST00000504679 CCDC179H3BU77 68 aa8.25□□□□□ -1.09
DDR1-254ENST00000504679 USH2AO75445 5202 aa8.22□□□□□ -1.09
DDR1-254ENST00000504679 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
DDR1-254ENST00000504679 SPRR2GQ9BYE4 73 aa8.2□□□□□ -1.1
DDR1-254ENST00000504679 COA5Q86WW8 74 aa8.18□□□□□ -1.1
DDR1-254ENST00000504679 P0C880 135 aa8.13□□□□□ -1.11
DDR1-254ENST00000504679 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
DDR1-254ENST00000504679 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
DDR1-254ENST00000504679 Q5VV11 94 aa8.08□□□□□ -1.12
DDR1-254ENST00000504679 R4GN34 69 aa8.07□□□□□ -1.12
DDR1-254ENST00000504679 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
DDR1-254ENST00000504679 SSPOA2VEC9 5147 aa8.05□□□□□ -1.12
DDR1-254ENST00000504679 M0QZ58 72 aa8□□□□□ -1.13
DDR1-254ENST00000504679 MT1BP07438 61 aa8□□□□□ -1.13
DDR1-254ENST00000504679 KRTAP19-6Q3LI70 58 aa7.99□□□□□ -1.13
DDR1-254ENST00000504679 TMEM258P61165 79 aa7.98□□□□□ -1.13
DDR1-254ENST00000504679 SEC61GP60059 68 aa7.97□□□□□ -1.13
DDR1-254ENST00000504679 SERP1Q9Y6X1 66 aa7.94□□□□□ -1.14
DDR1-254ENST00000504679 LINC01554Q52M75 96 aa7.87□□□□□ -1.15
DDR1-254ENST00000504679 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
DDR1-254ENST00000504679 FCGBPQ9Y6R7 5405 aaPredicted RBP7.85□□□□□ -1.15
DDR1-254ENST00000504679 A6NN06 94 aa7.81□□□□□ -1.16
DDR1-254ENST00000504679 A0A1B0GU69 56 aa7.8□□□□□ -1.16
DDR1-254ENST00000504679 A0A1B0GU33 70 aa7.76□□□□□ -1.17
DDR1-254ENST00000504679 KRTAP10-5P60370 271 aa7.76□□□□□ -1.17
DDR1-254ENST00000504679 PCP4P48539 62 aa7.75□□□□□ -1.17
DDR1-254ENST00000504679 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
DDR1-254ENST00000504679 PRR15LQ9BU68 103 aa7.7□□□□□ -1.18
DDR1-254ENST00000504679 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
DDR1-254ENST00000504679 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
DDR1-254ENST00000504679 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
DDR1-254ENST00000504679 SPATA8Q6RVD6 105 aa7.65□□□□□ -1.18
DDR1-254ENST00000504679 MT1XP80297 61 aa7.6□□□□□ -1.19
DDR1-254ENST00000504679 A0A0D9SG42 100 aa7.59□□□□□ -1.19
DDR1-254ENST00000504679 MACF1Q9UPN3 7388 aaKnown RBP7.57□□□□□ -1.2
DDR1-254ENST00000504679 SMIM26A0A096LP01 95 aa7.55□□□□□ -1.2
DDR1-254ENST00000504679 V9GYY9 64 aa7.53□□□□□ -1.2
DDR1-254ENST00000504679 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
DDR1-254ENST00000504679 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
DDR1-254ENST00000504679 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
DDR1-254ENST00000504679 RPS28P62857 69 aaKnown RBP7.46□□□□□ -1.22
DDR1-254ENST00000504679 Q1T7F1 81 aa7.46□□□□□ -1.22
DDR1-254ENST00000504679 UQCR11O14957 56 aa7.45□□□□□ -1.22
DDR1-254ENST00000504679 A8MU10 97 aa7.43□□□□□ -1.22
DDR1-254ENST00000504679 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
DDR1-254ENST00000504679 PSPHP1O15172 72 aa7.37□□□□□ -1.23
DDR1-254ENST00000504679 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
DDR1-254ENST00000504679 SYNE2Q8WXH0 6885 aaKnown RBP7.37□□□□□ -1.23
DDR1-254ENST00000504679 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
DDR1-254ENST00000504679 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
DDR1-254ENST00000504679 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
DDR1-254ENST00000504679 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
DDR1-254ENST00000504679 A6NED7 52 aa7.17□□□□□ -1.26
DDR1-254ENST00000504679 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
DDR1-254ENST00000504679 KMT2DO14686 5537 aa7.16□□□□□ -1.26
DDR1-254ENST00000504679 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
DDR1-254ENST00000504679 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
DDR1-254ENST00000504679 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
DDR1-254ENST00000504679 K7ERS5 55 aa7.14□□□□□ -1.27
DDR1-254ENST00000504679 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
DDR1-254ENST00000504679 SPRR2FQ96RM1 72 aa7.06□□□□□ -1.28
DDR1-254ENST00000504679 TNP1P09430 55 aa7.02□□□□□ -1.29
DDR1-254ENST00000504679 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
DDR1-254ENST00000504679 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
DDR1-254ENST00000504679 NEBP20929 6669 aa6.86□□□□□ -1.31
DDR1-254ENST00000504679 SPRR2EP22531 72 aa6.86□□□□□ -1.31
DDR1-254ENST00000504679 SPRR2BP35325 72 aa6.86□□□□□ -1.31
DDR1-254ENST00000504679 SPRR2AP35326 72 aa6.86□□□□□ -1.31
DDR1-254ENST00000504679 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
DDR1-254ENST00000504679 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
DDR1-254ENST00000504679 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
DDR1-254ENST00000504679 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
DDR1-254ENST00000504679 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
DDR1-254ENST00000504679 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
DDR1-254ENST00000504679 MT1EP04732 61 aa6.71□□□□□ -1.34
DDR1-254ENST00000504679 ROMO1P60602 79 aa6.68□□□□□ -1.34
DDR1-254ENST00000504679 SPRR2DP22532 72 aa6.63□□□□□ -1.35
DDR1-254ENST00000504679 KRTAP20-1Q3LI63 56 aa6.61□□□□□ -1.35
DDR1-254ENST00000504679 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
DDR1-254ENST00000504679 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms