RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 TPRXLQ17RH7 258 aa2.1□□□□□ -2.07
PCDH11X-208ENST00000504220 KRTAP11-1Q8IUC1 163 aa2.1□□□□□ -2.07
PCDH11X-208ENST00000504220 PKD1P98161 4303 aa2.09□□□□□ -2.07
PCDH11X-208ENST00000504220 KRTAP10-2P60368 255 aa2.09□□□□□ -2.08
PCDH11X-208ENST00000504220 M0R2T5 61 aa2.08□□□□□ -2.08
PCDH11X-208ENST00000504220 R4GN34 69 aa2.08□□□□□ -2.08
PCDH11X-208ENST00000504220 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
PCDH11X-208ENST00000504220 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
PCDH11X-208ENST00000504220 SPRR1BP22528 89 aa2.07□□□□□ -2.08
PCDH11X-208ENST00000504220 KRTAP10-1P60331 282 aa2.07□□□□□ -2.08
PCDH11X-208ENST00000504220 DMAC1Q96GE9 116 aa2.07□□□□□ -2.08
PCDH11X-208ENST00000504220 H0YAA0 97 aa2.07□□□□□ -2.08
PCDH11X-208ENST00000504220 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
PCDH11X-208ENST00000504220 S4R3F8 94 aa2.06□□□□□ -2.08
PCDH11X-208ENST00000504220 LCE2CQ5TA81 110 aa2.05□□□□□ -2.08
PCDH11X-208ENST00000504220 KRTAP7-1Q8IUC3 87 aa2.05□□□□□ -2.08
PCDH11X-208ENST00000504220 M0QZ58 72 aa2.05□□□□□ -2.08
PCDH11X-208ENST00000504220 H1FX-AS1Q4G0G2 97 aa2.04□□□□□ -2.08
PCDH11X-208ENST00000504220 HERC2O95714 4834 aa2.04□□□□□ -2.08
PCDH11X-208ENST00000504220 A0A1B0GVY2 172 aa2.03□□□□□ -2.08
PCDH11X-208ENST00000504220 Q6ZRN7 208 aaPredicted RBP2.02□□□□□ -2.09
PCDH11X-208ENST00000504220 VPS13BQ7Z7G8 4022 aa2.02□□□□□ -2.09
PCDH11X-208ENST00000504220 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
PCDH11X-208ENST00000504220 HSPG2P98160 4391 aa2.01□□□□□ -2.09
PCDH11X-208ENST00000504220 APOBP04114 4563 aaKnown RBP2□□□□□ -2.09
PCDH11X-208ENST00000504220 Q5VSD8 79 aa2□□□□□ -2.09
PCDH11X-208ENST00000504220 RYR1P21817 5038 aa2□□□□□ -2.09
PCDH11X-208ENST00000504220 C10orf95Q9H7T3 257 aa1.99□□□□□ -2.09
PCDH11X-208ENST00000504220 KRTAP13-2Q52LG2 175 aa1.99□□□□□ -2.09
PCDH11X-208ENST00000504220 LRP1BQ9NZR2 4599 aa1.97□□□□□ -2.09
PCDH11X-208ENST00000504220 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
PCDH11X-208ENST00000504220 KRTAP9-6A0A140TA67 174 aa1.95□□□□□ -2.1
PCDH11X-208ENST00000504220 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
PCDH11X-208ENST00000504220 FAT3Q8TDW7 4589 aa1.95□□□□□ -2.1
PCDH11X-208ENST00000504220 ABCA13Q86UQ4 5058 aa1.95□□□□□ -2.1
PCDH11X-208ENST00000504220 KRTAP4-8Q9BYQ9 185 aa1.94□□□□□ -2.1
PCDH11X-208ENST00000504220 KIAA1109Q2LD37 5005 aa1.94□□□□□ -2.1
PCDH11X-208ENST00000504220 KRTAP13-1Q8IUC0 172 aa1.94□□□□□ -2.1
PCDH11X-208ENST00000504220 TNXBP22105 4242 aa1.92□□□□□ -2.1
PCDH11X-208ENST00000504220 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
PCDH11X-208ENST00000504220 KRTAP10-4P60372 401 aaPredicted RBP1.9□□□□□ -2.11
PCDH11X-208ENST00000504220 KRTAP4-5Q9BYR2 181 aa1.89□□□□□ -2.11
PCDH11X-208ENST00000504220 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
PCDH11X-208ENST00000504220 XP32Q5T750 250 aa1.88□□□□□ -2.11
PCDH11X-208ENST00000504220 FAT1Q14517 4588 aa1.88□□□□□ -2.11
PCDH11X-208ENST00000504220 LPAP08519 4548 aa1.88□□□□□ -2.11
PCDH11X-208ENST00000504220 KRTAP3-1Q9BYR8 98 aa1.87□□□□□ -2.11
PCDH11X-208ENST00000504220 KRTAP9-2Q9BYQ4 174 aa1.87□□□□□ -2.11
PCDH11X-208ENST00000504220 KRTAP1-4P0C5Y4 121 aa1.86□□□□□ -2.11
PCDH11X-208ENST00000504220 TNP1P09430 55 aa1.86□□□□□ -2.11
PCDH11X-208ENST00000504220 SPRR5A0A1B0GTR4 108 aa1.83□□□□□ -2.12
PCDH11X-208ENST00000504220 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
PCDH11X-208ENST00000504220 KRTAP10-6P60371 365 aaPredicted RBP1.82□□□□□ -2.12
PCDH11X-208ENST00000504220 RPS29P62273 56 aaKnown RBP1.82□□□□□ -2.12
PCDH11X-208ENST00000504220 HMCN2Q8NDA2 5059 aa1.82□□□□□ -2.12
PCDH11X-208ENST00000504220 PRO2289Q9P1D8 64 aa1.82□□□□□ -2.12
PCDH11X-208ENST00000504220 HERC1Q15751 4861 aa1.8□□□□□ -2.12
PCDH11X-208ENST00000504220 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
PCDH11X-208ENST00000504220 FLGP20930 4061 aaPredicted RBP1.79□□□□□ -2.12
PCDH11X-208ENST00000504220 KRTAP12-2P59991 146 aa1.79□□□□□ -2.12
PCDH11X-208ENST00000504220 KRTAP19-1Q8IUB9 90 aa1.79□□□□□ -2.12
PCDH11X-208ENST00000504220 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.78□□□□□ -2.12
PCDH11X-208ENST00000504220 KRTAP10-10P60014 251 aa1.78□□□□□ -2.12
PCDH11X-208ENST00000504220 UBR4Q5T4S7 5183 aa1.76□□□□□ -2.13
PCDH11X-208ENST00000504220 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
PCDH11X-208ENST00000504220 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
PCDH11X-208ENST00000504220 PP632Q6XCG6 107 aa1.75□□□□□ -2.13
PCDH11X-208ENST00000504220 KRTAP4-8A0A0G2JLE6 195 aa1.74□□□□□ -2.13
PCDH11X-208ENST00000504220 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
PCDH11X-208ENST00000504220 KRTAP9-9Q9BYP9 154 aa1.73□□□□□ -2.13
PCDH11X-208ENST00000504220 KRTAP9-4Q9BYQ2 154 aa1.73□□□□□ -2.13
PCDH11X-208ENST00000504220 KRTAP9-7A8MTY7 169 aa1.71□□□□□ -2.14
PCDH11X-208ENST00000504220 KRTAP4-7Q9BYR0 210 aa1.71□□□□□ -2.14
PCDH11X-208ENST00000504220 KRTAP4-9Q9BYQ8 210 aa1.7□□□□□ -2.14
PCDH11X-208ENST00000504220 LRP2P98164 4655 aa1.68□□□□□ -2.14
PCDH11X-208ENST00000504220 KRTAP23-1A1A580 65 aa1.68□□□□□ -2.14
PCDH11X-208ENST00000504220 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
PCDH11X-208ENST00000504220 LCE1DQ5T752 114 aa1.64□□□□□ -2.15
PCDH11X-208ENST00000504220 KRTAP4-2Q9BYR5 136 aa1.63□□□□□ -2.15
PCDH11X-208ENST00000504220 INE1O15225 51 aa1.62□□□□□ -2.15
PCDH11X-208ENST00000504220 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
PCDH11X-208ENST00000504220 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
PCDH11X-208ENST00000504220 KRTAP19-4Q3LI73 84 aa1.6□□□□□ -2.15
PCDH11X-208ENST00000504220 MUC2Q02817 5179 aa1.6□□□□□ -2.15
PCDH11X-208ENST00000504220 KRTAP2-2Q9BYT5 123 aa1.6□□□□□ -2.15
PCDH11X-208ENST00000504220 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
PCDH11X-208ENST00000504220 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
PCDH11X-208ENST00000504220 KRTAP9-3Q9BYQ3 159 aa1.58□□□□□ -2.16
PCDH11X-208ENST00000504220 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
PCDH11X-208ENST00000504220 LCE3BQ5TA77 95 aa1.56□□□□□ -2.16
PCDH11X-208ENST00000504220 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
PCDH11X-208ENST00000504220 FSIP2Q5CZC0 6907 aa1.55□□□□□ -2.16
PCDH11X-208ENST00000504220 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
PCDH11X-208ENST00000504220 LCE5AQ5TCM9 118 aa1.54□□□□□ -2.16
PCDH11X-208ENST00000504220 KRTAP10-12P60413 245 aa1.53□□□□□ -2.17
PCDH11X-208ENST00000504220 MT1HP80294 61 aa1.53□□□□□ -2.17
PCDH11X-208ENST00000504220 LCE3AQ5TA76 89 aa1.53□□□□□ -2.17
PCDH11X-208ENST00000504220 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
PCDH11X-208ENST00000504220 KRTAP9-8Q9BYQ0 159 aa1.52□□□□□ -2.17
PCDH11X-208ENST00000504220 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms