RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 KRTAP19-6Q3LI70 58 aa8.24□□□□□ -1.09
NFKB1-204ENST00000504044 A8MUN3 132 aa8.23□□□□□ -1.09
NFKB1-204ENST00000504044 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
NFKB1-204ENST00000504044 NDUFC1O43677 76 aa8.2□□□□□ -1.1
NFKB1-204ENST00000504044 SCGB1A1P11684 91 aa8.19□□□□□ -1.1
NFKB1-204ENST00000504044 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
NFKB1-204ENST00000504044 FCGBPQ9Y6R7 5405 aaPredicted RBP8.17□□□□□ -1.1
NFKB1-204ENST00000504044 KRTAP9-7A8MTY7 169 aa8.16□□□□□ -1.1
NFKB1-204ENST00000504044 H3BPC8 53 aa8.16□□□□□ -1.1
NFKB1-204ENST00000504044 KLKP1Q107X0 134 aa8.16□□□□□ -1.1
NFKB1-204ENST00000504044 IMUPQ9GZP8 106 aa8.16□□□□□ -1.1
NFKB1-204ENST00000504044 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
NFKB1-204ENST00000504044 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
NFKB1-204ENST00000504044 Q5VV11 94 aa8.1□□□□□ -1.11
NFKB1-204ENST00000504044 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
NFKB1-204ENST00000504044 H0YAA0 97 aa8.07□□□□□ -1.12
NFKB1-204ENST00000504044 K7ERU9 68 aa8.05□□□□□ -1.12
NFKB1-204ENST00000504044 KRTAP19-8Q3LI54 63 aa8.01□□□□□ -1.13
NFKB1-204ENST00000504044 SMIM20Q8N5G0 67 aa8□□□□□ -1.13
NFKB1-204ENST00000504044 A6NN06 94 aa7.97□□□□□ -1.13
NFKB1-204ENST00000504044 MT1BP07438 61 aa7.95□□□□□ -1.14
NFKB1-204ENST00000504044 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
NFKB1-204ENST00000504044 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
NFKB1-204ENST00000504044 MT-ATP8P03928 68 aa7.92□□□□□ -1.14
NFKB1-204ENST00000504044 C20orf197Q8N268 126 aa7.92□□□□□ -1.14
NFKB1-204ENST00000504044 MACF1Q9UPN3 7388 aaKnown RBP7.91□□□□□ -1.14
NFKB1-204ENST00000504044 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
NFKB1-204ENST00000504044 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
NFKB1-204ENST00000504044 ACYP2P14621 99 aa7.84□□□□□ -1.15
NFKB1-204ENST00000504044 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
NFKB1-204ENST00000504044 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
NFKB1-204ENST00000504044 R4GN34 69 aa7.81□□□□□ -1.16
NFKB1-204ENST00000504044 SYNE2Q8WXH0 6885 aaKnown RBP7.81□□□□□ -1.16
NFKB1-204ENST00000504044 KRTAP6-3Q3LI67 103 aa7.79□□□□□ -1.16
NFKB1-204ENST00000504044 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
NFKB1-204ENST00000504044 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
NFKB1-204ENST00000504044 KRTAP4-12Q9BQ66 201 aa7.73□□□□□ -1.17
NFKB1-204ENST00000504044 PRO2289Q9P1D8 64 aa7.72□□□□□ -1.17
NFKB1-204ENST00000504044 M0QZ58 72 aa7.71□□□□□ -1.18
NFKB1-204ENST00000504044 P0C880 135 aa7.7□□□□□ -1.18
NFKB1-204ENST00000504044 SNURFQ9Y675 71 aa7.68□□□□□ -1.18
NFKB1-204ENST00000504044 SERP2Q8N6R1 65 aa7.66□□□□□ -1.18
NFKB1-204ENST00000504044 SPANXA2-OT1Q8N9U9 137 aa7.64□□□□□ -1.19
NFKB1-204ENST00000504044 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
NFKB1-204ENST00000504044 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
NFKB1-204ENST00000504044 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
NFKB1-204ENST00000504044 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
NFKB1-204ENST00000504044 MT1XP80297 61 aa7.49□□□□□ -1.21
NFKB1-204ENST00000504044 COX7CP15954 63 aa7.44□□□□□ -1.22
NFKB1-204ENST00000504044 KRTAP5-9P26371 169 aa7.44□□□□□ -1.22
NFKB1-204ENST00000504044 SEC61GP60059 68 aa7.39□□□□□ -1.23
NFKB1-204ENST00000504044 COA5Q86WW8 74 aa7.39□□□□□ -1.23
NFKB1-204ENST00000504044 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
NFKB1-204ENST00000504044 NEBP20929 6669 aa7.35□□□□□ -1.23
NFKB1-204ENST00000504044 SERP1Q9Y6X1 66 aa7.34□□□□□ -1.23
NFKB1-204ENST00000504044 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
NFKB1-204ENST00000504044 MUC12Q9UKN1 5478 aa7.29□□□□□ -1.24
NFKB1-204ENST00000504044 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
NFKB1-204ENST00000504044 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
NFKB1-204ENST00000504044 H7BZZ5 65 aa7.26□□□□□ -1.25
NFKB1-204ENST00000504044 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
NFKB1-204ENST00000504044 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
NFKB1-204ENST00000504044 KMT2DO14686 5537 aa7.23□□□□□ -1.25
NFKB1-204ENST00000504044 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
NFKB1-204ENST00000504044 KRTAP20-1Q3LI63 56 aa7.2□□□□□ -1.26
NFKB1-204ENST00000504044 KRTAP13-4Q3LI77 160 aa7.18□□□□□ -1.26
NFKB1-204ENST00000504044 SPRR2EP22531 72 aa7.16□□□□□ -1.26
NFKB1-204ENST00000504044 SPRR2BP35325 72 aa7.16□□□□□ -1.26
NFKB1-204ENST00000504044 SPRR2AP35326 72 aa7.16□□□□□ -1.26
NFKB1-204ENST00000504044 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
NFKB1-204ENST00000504044 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
NFKB1-204ENST00000504044 MDN1Q9NU22 5596 aa7.15□□□□□ -1.27
NFKB1-204ENST00000504044 KRTAP10-7P60409 375 aaPredicted RBP7.14□□□□□ -1.27
NFKB1-204ENST00000504044 A0A1B0GU33 70 aa7.13□□□□□ -1.27
NFKB1-204ENST00000504044 A0A0D9SG42 100 aa7.09□□□□□ -1.27
NFKB1-204ENST00000504044 A0A1B0GU69 56 aa7.08□□□□□ -1.28
NFKB1-204ENST00000504044 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
NFKB1-204ENST00000504044 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
NFKB1-204ENST00000504044 SPATA8Q6RVD6 105 aa7.05□□□□□ -1.28
NFKB1-204ENST00000504044 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
NFKB1-204ENST00000504044 SPINT4Q6UDR6 99 aa7.03□□□□□ -1.28
NFKB1-204ENST00000504044 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
NFKB1-204ENST00000504044 LCE1AQ5T7P2 110 aa7.01□□□□□ -1.29
NFKB1-204ENST00000504044 SMIM26A0A096LP01 95 aa7□□□□□ -1.29
NFKB1-204ENST00000504044 CCDC179H3BU77 68 aa6.99□□□□□ -1.29
NFKB1-204ENST00000504044 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
NFKB1-204ENST00000504044 SPRR2DP22532 72 aa6.93□□□□□ -1.3
NFKB1-204ENST00000504044 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
NFKB1-204ENST00000504044 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
NFKB1-204ENST00000504044 LCE4AQ5TA78 99 aa6.88□□□□□ -1.31
NFKB1-204ENST00000504044 TMEM258P61165 79 aa6.85□□□□□ -1.31
NFKB1-204ENST00000504044 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
NFKB1-204ENST00000504044 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
NFKB1-204ENST00000504044 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
NFKB1-204ENST00000504044 LINC01558Q9Y6Z2 57 aa6.79□□□□□ -1.32
NFKB1-204ENST00000504044 A8MU10 97 aa6.78□□□□□ -1.32
NFKB1-204ENST00000504044 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
NFKB1-204ENST00000504044 UQCR11O14957 56 aa6.68□□□□□ -1.34
NFKB1-204ENST00000504044 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
NFKB1-204ENST00000504044 TNP1P09430 55 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms