RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 DYNC1H1Q14204 4646 aaKnown RBP2.1□□□□□ -2.07
ALYREF-201ENST00000504015 KRTAP10-8P60410 259 aa2.1□□□□□ -2.07
ALYREF-201ENST00000504015 HSPG2P98160 4391 aa2.1□□□□□ -2.07
ALYREF-201ENST00000504015 PKHD1L1Q86WI1 4243 aa2.09□□□□□ -2.08
ALYREF-201ENST00000504015 APOBP04114 4563 aaKnown RBP2.08□□□□□ -2.08
ALYREF-201ENST00000504015 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
ALYREF-201ENST00000504015 COX6B2Q6YFQ2 88 aa2.08□□□□□ -2.08
ALYREF-201ENST00000504015 Q8N1X5 172 aa2.08□□□□□ -2.08
ALYREF-201ENST00000504015 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
ALYREF-201ENST00000504015 FLG2Q5D862 2391 aaPredicted RBP2.06□□□□□ -2.08
ALYREF-201ENST00000504015 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.06□□□□□ -2.08
ALYREF-201ENST00000504015 RPL37P61927 97 aaKnown RBP2.06□□□□□ -2.08
ALYREF-201ENST00000504015 KRTAP3-1Q9BYR8 98 aa2.06□□□□□ -2.08
ALYREF-201ENST00000504015 NEBP20929 6669 aa2.06□□□□□ -2.08
ALYREF-201ENST00000504015 MYCBP2O75592 4640 aa2.05□□□□□ -2.08
ALYREF-201ENST00000504015 A0A1B0GU33 70 aa2.05□□□□□ -2.08
ALYREF-201ENST00000504015 Q5VSD8 79 aa2.05□□□□□ -2.08
ALYREF-201ENST00000504015 H1FX-AS1Q4G0G2 97 aa2.04□□□□□ -2.08
ALYREF-201ENST00000504015 RBM12B-AS1Q9P1G2 102 aa2.04□□□□□ -2.08
ALYREF-201ENST00000504015 FAT1Q14517 4588 aa2.03□□□□□ -2.09
ALYREF-201ENST00000504015 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.09
ALYREF-201ENST00000504015 H0YAA0 97 aa2.02□□□□□ -2.09
ALYREF-201ENST00000504015 K7ERS5 55 aa2.02□□□□□ -2.09
ALYREF-201ENST00000504015 XP32Q5T750 250 aa2.02□□□□□ -2.09
ALYREF-201ENST00000504015 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
ALYREF-201ENST00000504015 TNXBP22105 4242 aa2.01□□□□□ -2.09
ALYREF-201ENST00000504015 TPRXLQ17RH7 258 aa2□□□□□ -2.09
ALYREF-201ENST00000504015 S4R3F8 94 aa2□□□□□ -2.09
ALYREF-201ENST00000504015 SSPOA2VEC9 5147 aa2□□□□□ -2.09
ALYREF-201ENST00000504015 MT1HL1P0DM35 61 aa1.99□□□□□ -2.09
ALYREF-201ENST00000504015 KRTAP3-3Q9BYR6 98 aa1.99□□□□□ -2.09
ALYREF-201ENST00000504015 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
ALYREF-201ENST00000504015 KRTAP10-6P60371 365 aaPredicted RBP1.97□□□□□ -2.09
ALYREF-201ENST00000504015 PRAC1Q96KF2 57 aa1.97□□□□□ -2.09
ALYREF-201ENST00000504015 CSAG1Q6PB30 78 aa1.96□□□□□ -2.1
ALYREF-201ENST00000504015 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
ALYREF-201ENST00000504015 KRTAP3-2Q9BYR7 98 aa1.96□□□□□ -2.1
ALYREF-201ENST00000504015 LRP2P98164 4655 aa1.96□□□□□ -2.1
ALYREF-201ENST00000504015 LRP1Q07954 4544 aaKnown RBP1.95□□□□□ -2.1
ALYREF-201ENST00000504015 M0QZ58 72 aa1.94□□□□□ -2.1
ALYREF-201ENST00000504015 SEC61BP60468 96 aaKnown RBP1.94□□□□□ -2.1
ALYREF-201ENST00000504015 ROMO1P60602 79 aa1.94□□□□□ -2.1
ALYREF-201ENST00000504015 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
ALYREF-201ENST00000504015 LCE2DQ5TA82 110 aaPredicted RBP1.93□□□□□ -2.1
ALYREF-201ENST00000504015 MACF1Q9UPN3 7388 aaKnown RBP1.91□□□□□ -2.1
ALYREF-201ENST00000504015 P0C880 135 aa1.91□□□□□ -2.1
ALYREF-201ENST00000504015 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
ALYREF-201ENST00000504015 A0A0D9SG42 100 aa1.88□□□□□ -2.11
ALYREF-201ENST00000504015 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
ALYREF-201ENST00000504015 LCE2AQ5TA79 106 aaPredicted RBP1.88□□□□□ -2.11
ALYREF-201ENST00000504015 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
ALYREF-201ENST00000504015 J3QL48 77 aa1.86□□□□□ -2.11
ALYREF-201ENST00000504015 KRTAP12-2P59991 146 aa1.86□□□□□ -2.11
ALYREF-201ENST00000504015 KRTAP20-1Q3LI63 56 aa1.86□□□□□ -2.11
ALYREF-201ENST00000504015 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
ALYREF-201ENST00000504015 R4GN34 69 aa1.85□□□□□ -2.11
ALYREF-201ENST00000504015 MUC17Q685J3 4493 aa1.84□□□□□ -2.11
ALYREF-201ENST00000504015 KRTAP19-2Q3LHN2 52 aa1.81□□□□□ -2.12
ALYREF-201ENST00000504015 LPAP08519 4548 aa1.81□□□□□ -2.12
ALYREF-201ENST00000504015 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
ALYREF-201ENST00000504015 USH2AO75445 5202 aa1.79□□□□□ -2.12
ALYREF-201ENST00000504015 PP632Q6XCG6 107 aa1.78□□□□□ -2.12
ALYREF-201ENST00000504015 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
ALYREF-201ENST00000504015 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
ALYREF-201ENST00000504015 KRTAP23-1A1A580 65 aa1.76□□□□□ -2.13
ALYREF-201ENST00000504015 LORP23490 312 aaPredicted RBP1.76□□□□□ -2.13
ALYREF-201ENST00000504015 KRTAP15-1Q3LI76 137 aa1.75□□□□□ -2.13
ALYREF-201ENST00000504015 CAMK2N1Q7Z7J9 78 aa1.75□□□□□ -2.13
ALYREF-201ENST00000504015 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
ALYREF-201ENST00000504015 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
ALYREF-201ENST00000504015 KMT2DO14686 5537 aa1.72□□□□□ -2.13
ALYREF-201ENST00000504015 H3BS24 57 aa1.72□□□□□ -2.13
ALYREF-201ENST00000504015 TNP1P09430 55 aa1.71□□□□□ -2.14
ALYREF-201ENST00000504015 SPRR2GQ9BYE4 73 aa1.71□□□□□ -2.14
ALYREF-201ENST00000504015 LCE2CQ5TA81 110 aa1.7□□□□□ -2.14
ALYREF-201ENST00000504015 PLAC4Q8WY50 150 aa1.7□□□□□ -2.14
ALYREF-201ENST00000504015 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
ALYREF-201ENST00000504015 LOC100996750A0A140TA64 210 aa1.68□□□□□ -2.14
ALYREF-201ENST00000504015 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
ALYREF-201ENST00000504015 KRTAP4-6Q9BYQ5 205 aa1.68□□□□□ -2.14
ALYREF-201ENST00000504015 NDUFAF8A1L188 74 aa1.67□□□□□ -2.14
ALYREF-201ENST00000504015 M0R2T5 61 aa1.67□□□□□ -2.14
ALYREF-201ENST00000504015 MT1HP80294 61 aa1.66□□□□□ -2.14
ALYREF-201ENST00000504015 KRTAP19-1Q8IUB9 90 aa1.66□□□□□ -2.14
ALYREF-201ENST00000504015 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
ALYREF-201ENST00000504015 KRTAP19-8Q3LI54 63 aa1.64□□□□□ -2.15
ALYREF-201ENST00000504015 MT2AP02795 61 aa1.63□□□□□ -2.15
ALYREF-201ENST00000504015 KRTAP10-10P60014 251 aa1.63□□□□□ -2.15
ALYREF-201ENST00000504015 KRTAP9-8Q9BYQ0 159 aa1.63□□□□□ -2.15
ALYREF-201ENST00000504015 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
ALYREF-201ENST00000504015 MT1FP04733 61 aa1.61□□□□□ -2.15
ALYREF-201ENST00000504015 KRTAP2-3P0C7H8 128 aa1.61□□□□□ -2.15
ALYREF-201ENST00000504015 KRTAP2-4Q9BYR9 128 aa1.61□□□□□ -2.15
ALYREF-201ENST00000504015 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
ALYREF-201ENST00000504015 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
ALYREF-201ENST00000504015 MT1BP07438 61 aa1.58□□□□□ -2.16
ALYREF-201ENST00000504015 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
ALYREF-201ENST00000504015 PRO2289Q9P1D8 64 aa1.58□□□□□ -2.16
ALYREF-201ENST00000504015 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
ALYREF-201ENST00000504015 A0A0A0MQY5 61 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms