RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 CYP4F30PQ9H0H9 118 aa3.63□□□□□ -1.83
TOPBP1-203ENST00000503464 IGKV2D-30A0A075B6S6 120 aa3.61□□□□□ -1.83
TOPBP1-203ENST00000503464 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
TOPBP1-203ENST00000503464 ATP11AUNQ6ZP68 121 aa3.6□□□□□ -1.83
TOPBP1-203ENST00000503464 NDUFC1O43677 76 aa3.59□□□□□ -1.83
TOPBP1-203ENST00000503464 SPINK7P58062 85 aa3.59□□□□□ -1.83
TOPBP1-203ENST00000503464 C7orf65Q6ZTY9 151 aa3.59□□□□□ -1.83
TOPBP1-203ENST00000503464 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
TOPBP1-203ENST00000503464 UBR4Q5T4S7 5183 aa3.58□□□□□ -1.84
TOPBP1-203ENST00000503464 HRES1P13985 223 aa3.58□□□□□ -1.84
TOPBP1-203ENST00000503464 TMEM258P61165 79 aa3.57□□□□□ -1.84
TOPBP1-203ENST00000503464 RNF213Q63HN8 5207 aa3.56□□□□□ -1.84
TOPBP1-203ENST00000503464 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
TOPBP1-203ENST00000503464 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
TOPBP1-203ENST00000503464 SPANXA2-OT1Q8N9U9 137 aa3.55□□□□□ -1.84
TOPBP1-203ENST00000503464 SEC61BP60468 96 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-203ENST00000503464 KRTAP3-1Q9BYR8 98 aa3.54□□□□□ -1.84
TOPBP1-203ENST00000503464 C4orf26Q17RF5 130 aa3.53□□□□□ -1.84
TOPBP1-203ENST00000503464 MPLKIPQ8TAP9 179 aa3.53□□□□□ -1.84
TOPBP1-203ENST00000503464 MUC2Q02817 5179 aa3.52□□□□□ -1.85
TOPBP1-203ENST00000503464 DMAC1Q96GE9 116 aa3.52□□□□□ -1.85
TOPBP1-203ENST00000503464 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-203ENST00000503464 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
TOPBP1-203ENST00000503464 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
TOPBP1-203ENST00000503464 COA5Q86WW8 74 aa3.46□□□□□ -1.86
TOPBP1-203ENST00000503464 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
TOPBP1-203ENST00000503464 A8MUN3 132 aa3.44□□□□□ -1.86
TOPBP1-203ENST00000503464 ACYP2P14621 99 aa3.43□□□□□ -1.86
TOPBP1-203ENST00000503464 RPS28P62857 69 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-203ENST00000503464 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
TOPBP1-203ENST00000503464 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
TOPBP1-203ENST00000503464 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.87
TOPBP1-203ENST00000503464 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
TOPBP1-203ENST00000503464 LCA10Q71F78 164 aa3.39□□□□□ -1.87
TOPBP1-203ENST00000503464 S4R3F8 94 aa3.37□□□□□ -1.87
TOPBP1-203ENST00000503464 CHKB-CPT1BH3BT56 60 aa3.36□□□□□ -1.87
TOPBP1-203ENST00000503464 SMIM26A0A096LP01 95 aa3.35□□□□□ -1.87
TOPBP1-203ENST00000503464 MT1HP80294 61 aa3.32□□□□□ -1.88
TOPBP1-203ENST00000503464 Q1T7F1 81 aa3.31□□□□□ -1.88
TOPBP1-203ENST00000503464 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-203ENST00000503464 LINC01558Q9Y6Z2 57 aa3.3□□□□□ -1.88
TOPBP1-203ENST00000503464 SPTSSBQ8NFR3 76 aa3.28□□□□□ -1.88
TOPBP1-203ENST00000503464 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-203ENST00000503464 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
TOPBP1-203ENST00000503464 PSPHP1O15172 72 aa3.26□□□□□ -1.89
TOPBP1-203ENST00000503464 PRR15LQ9BU68 103 aa3.26□□□□□ -1.89
TOPBP1-203ENST00000503464 Q5VV11 94 aa3.25□□□□□ -1.89
TOPBP1-203ENST00000503464 H0YAA0 97 aa3.24□□□□□ -1.89
TOPBP1-203ENST00000503464 P0C880 135 aa3.24□□□□□ -1.89
TOPBP1-203ENST00000503464 V9GYY9 64 aa3.24□□□□□ -1.89
TOPBP1-203ENST00000503464 A0A1B0GU69 56 aa3.23□□□□□ -1.89
TOPBP1-203ENST00000503464 ADM2Q7Z4H4 148 aa3.23□□□□□ -1.89
TOPBP1-203ENST00000503464 M0R2T5 61 aa3.2□□□□□ -1.9
TOPBP1-203ENST00000503464 MT2AP02795 61 aa3.19□□□□□ -1.9
TOPBP1-203ENST00000503464 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
TOPBP1-203ENST00000503464 MT1FP04733 61 aa3.17□□□□□ -1.9
TOPBP1-203ENST00000503464 SEC61GP60059 68 aa3.17□□□□□ -1.9
TOPBP1-203ENST00000503464 A0A1B0GU33 70 aa3.16□□□□□ -1.9
TOPBP1-203ENST00000503464 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
TOPBP1-203ENST00000503464 A8MU10 97 aa3.15□□□□□ -1.91
TOPBP1-203ENST00000503464 SPATA8Q6RVD6 105 aa3.14□□□□□ -1.91
TOPBP1-203ENST00000503464 A6NED7 52 aa3.13□□□□□ -1.91
TOPBP1-203ENST00000503464 UQCR11O14957 56 aa3.12□□□□□ -1.91
TOPBP1-203ENST00000503464 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
TOPBP1-203ENST00000503464 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
TOPBP1-203ENST00000503464 M0QZ58 72 aa3.09□□□□□ -1.91
TOPBP1-203ENST00000503464 SPRR2GQ9BYE4 73 aa3.08□□□□□ -1.92
TOPBP1-203ENST00000503464 CDC42SE1Q9NRR8 79 aa3.08□□□□□ -1.92
TOPBP1-203ENST00000503464 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
TOPBP1-203ENST00000503464 R4GN34 69 aa3.08□□□□□ -1.92
TOPBP1-203ENST00000503464 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
TOPBP1-203ENST00000503464 A0A0D9SG42 100 aa3.06□□□□□ -1.92
TOPBP1-203ENST00000503464 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
TOPBP1-203ENST00000503464 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
TOPBP1-203ENST00000503464 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
TOPBP1-203ENST00000503464 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-203ENST00000503464 LINC01554Q52M75 96 aa3.03□□□□□ -1.92
TOPBP1-203ENST00000503464 USH2AO75445 5202 aa3.01□□□□□ -1.93
TOPBP1-203ENST00000503464 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
TOPBP1-203ENST00000503464 MT1BP07438 61 aa3□□□□□ -1.93
TOPBP1-203ENST00000503464 KRTAP15-1Q3LI76 137 aa3□□□□□ -1.93
TOPBP1-203ENST00000503464 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
TOPBP1-203ENST00000503464 A6NN06 94 aa2.99□□□□□ -1.93
TOPBP1-203ENST00000503464 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
TOPBP1-203ENST00000503464 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
TOPBP1-203ENST00000503464 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
TOPBP1-203ENST00000503464 K7ERS5 55 aa2.89□□□□□ -1.95
TOPBP1-203ENST00000503464 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
TOPBP1-203ENST00000503464 MT1XP80297 61 aa2.89□□□□□ -1.95
TOPBP1-203ENST00000503464 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
TOPBP1-203ENST00000503464 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
TOPBP1-203ENST00000503464 PMAIP1Q13794 54 aa2.88□□□□□ -1.95
TOPBP1-203ENST00000503464 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
TOPBP1-203ENST00000503464 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
TOPBP1-203ENST00000503464 ROMO1P60602 79 aa2.84□□□□□ -1.95
TOPBP1-203ENST00000503464 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
TOPBP1-203ENST00000503464 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
TOPBP1-203ENST00000503464 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
TOPBP1-203ENST00000503464 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
TOPBP1-203ENST00000503464 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms