RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	HIST1H4A	P62805	103 aa	Known RBP	5.04	□□□□□ -1.6
FXR1-222	ENST00000498658	LINC00643	Q86TS7	51 aa		5.02	□□□□□ -1.61
FXR1-222	ENST00000498658		A0A0A0MQY5	61 aa		5.01	□□□□□ -1.61
FXR1-222	ENST00000498658	TRAV22	A0A0B4J277	110 aa		5.01	□□□□□ -1.61
FXR1-222	ENST00000498658	C1orf64	Q8NEQ6	169 aa		5	□□□□□ -1.61
FXR1-222	ENST00000498658	LOC101927531	A0A1B0GV80	90 aa		4.99	□□□□□ -1.61
FXR1-222	ENST00000498658		J3QR89	54 aa		4.99	□□□□□ -1.61
FXR1-222	ENST00000498658	UQCRQ	O14949	82 aa		4.99	□□□□□ -1.61
FXR1-222	ENST00000498658	ATOX1	O00244	68 aa		4.98	□□□□□ -1.61
FXR1-222	ENST00000498658	CYP4F30P	Q9H0H9	118 aa		4.98	□□□□□ -1.61
FXR1-222	ENST00000498658		S4R3F8	94 aa		4.96	□□□□□ -1.62
FXR1-222	ENST00000498658	USH2A	O75445	5202 aa		4.96	□□□□□ -1.62
FXR1-222	ENST00000498658		K7ERU9	68 aa		4.94	□□□□□ -1.62
FXR1-222	ENST00000498658	CSAG1	Q6PB30	78 aa		4.94	□□□□□ -1.62
FXR1-222	ENST00000498658		H0Y9P7	68 aa		4.93	□□□□□ -1.62
FXR1-222	ENST00000498658	C5orf47	Q569G3	176 aa		4.93	□□□□□ -1.62
FXR1-222	ENST00000498658		A0A087WVE0	104 aa		4.92	□□□□□ -1.62
FXR1-222	ENST00000498658	LCA10	Q71F78	164 aa		4.91	□□□□□ -1.62
FXR1-222	ENST00000498658	SSPO	A2VEC9	5147 aa		4.91	□□□□□ -1.62
FXR1-222	ENST00000498658	MP68	P56378	58 aa		4.89	□□□□□ -1.63
FXR1-222	ENST00000498658	FAM236A	A0A1B0GUQ0	79 aa		4.88	□□□□□ -1.63
FXR1-222	ENST00000498658	FAM236B	A0A1B0GV22	79 aa		4.88	□□□□□ -1.63
FXR1-222	ENST00000498658		A8MUN3	132 aa		4.86	□□□□□ -1.63
FXR1-222	ENST00000498658	LINC00208	Q96KT6	92 aa		4.86	□□□□□ -1.63
FXR1-222	ENST00000498658	OCR1	Q9BZK8	76 aa		4.86	□□□□□ -1.63
FXR1-222	ENST00000498658	SCGB1A1	P11684	91 aa		4.84	□□□□□ -1.63
FXR1-222	ENST00000498658		H3BPC8	53 aa		4.83	□□□□□ -1.64
FXR1-222	ENST00000498658	NDUFC1	O43677	76 aa		4.82	□□□□□ -1.64
FXR1-222	ENST00000498658	IMUP	Q9GZP8	106 aa		4.82	□□□□□ -1.64
FXR1-222	ENST00000498658	KRTAP19-6	Q3LI70	58 aa		4.81	□□□□□ -1.64
FXR1-222	ENST00000498658	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.8	□□□□□ -1.64
FXR1-222	ENST00000498658	KLKP1	Q107X0	134 aa		4.79	□□□□□ -1.64
FXR1-222	ENST00000498658	CRIPT	Q9P021	101 aa		4.78	□□□□□ -1.64
FXR1-222	ENST00000498658	MACF1	Q9UPN3	7388 aa	Known RBP	4.76	□□□□□ -1.65
FXR1-222	ENST00000498658	SPRR2G	Q9BYE4	73 aa		4.76	□□□□□ -1.65
FXR1-222	ENST00000498658		H0YAA0	97 aa		4.75	□□□□□ -1.65
FXR1-222	ENST00000498658	SMIM20	Q8N5G0	67 aa		4.75	□□□□□ -1.65
FXR1-222	ENST00000498658		Q5VV11	94 aa		4.73	□□□□□ -1.65
FXR1-222	ENST00000498658	MT-ATP8	P03928	68 aa		4.72	□□□□□ -1.65
FXR1-222	ENST00000498658	TRAV7	A0A075B6U4	112 aa		4.7	□□□□□ -1.66
FXR1-222	ENST00000498658	KRTAP19-8	Q3LI54	63 aa		4.7	□□□□□ -1.66
FXR1-222	ENST00000498658	DMAC1	Q96GE9	116 aa		4.7	□□□□□ -1.66
FXR1-222	ENST00000498658	SYNE2	Q8WXH0	6885 aa	Known RBP	4.7	□□□□□ -1.66
FXR1-222	ENST00000498658	ADM2	Q7Z4H4	148 aa		4.67	□□□□□ -1.66
FXR1-222	ENST00000498658	MT1B	P07438	61 aa		4.66	□□□□□ -1.66
FXR1-222	ENST00000498658	C20orf197	Q8N268	126 aa		4.65	□□□□□ -1.67
FXR1-222	ENST00000498658		A6NN06	94 aa		4.64	□□□□□ -1.67
FXR1-222	ENST00000498658	ACYP2	P14621	99 aa		4.64	□□□□□ -1.67
FXR1-222	ENST00000498658	SPTSSB	Q8NFR3	76 aa		4.6	□□□□□ -1.67
FXR1-222	ENST00000498658	SEC61G	P60059	68 aa		4.59	□□□□□ -1.67
FXR1-222	ENST00000498658	KRTAP10-5	P60370	271 aa		4.57	□□□□□ -1.68
FXR1-222	ENST00000498658	SERP2	Q8N6R1	65 aa		4.57	□□□□□ -1.68
FXR1-222	ENST00000498658		R4GN34	69 aa		4.57	□□□□□ -1.68
FXR1-222	ENST00000498658	CHKB-CPT1B	H3BT56	60 aa		4.55	□□□□□ -1.68
FXR1-222	ENST00000498658	SPANXA2-OT1	Q8N9U9	137 aa		4.55	□□□□□ -1.68
FXR1-222	ENST00000498658	ANAPC13	Q9BS18	74 aa		4.55	□□□□□ -1.68
FXR1-222	ENST00000498658	SNURF	Q9Y675	71 aa		4.55	□□□□□ -1.68
FXR1-222	ENST00000498658		P0C880	135 aa		4.53	□□□□□ -1.68
FXR1-222	ENST00000498658	KRTAP6-3	Q3LI67	103 aa		4.53	□□□□□ -1.68
FXR1-222	ENST00000498658		M0QZ58	72 aa		4.52	□□□□□ -1.69
FXR1-222	ENST00000498658	PLAC4	Q8WY50	150 aa		4.52	□□□□□ -1.69
FXR1-222	ENST00000498658	PRO2289	Q9P1D8	64 aa		4.51	□□□□□ -1.69
FXR1-222	ENST00000498658	CCDC179	H3BU77	68 aa		4.46	□□□□□ -1.7
FXR1-222	ENST00000498658	COX7C	P15954	63 aa		4.45	□□□□□ -1.7
FXR1-222	ENST00000498658	LINC01554	Q52M75	96 aa		4.43	□□□□□ -1.7
FXR1-222	ENST00000498658	MT1X	P80297	61 aa		4.4	□□□□□ -1.71
FXR1-222	ENST00000498658	NEB	P20929	6669 aa		4.4	□□□□□ -1.71
FXR1-222	ENST00000498658	KRTAP5-3	Q6L8H2	238 aa		4.39	□□□□□ -1.71
FXR1-222	ENST00000498658	LCE1A	Q5T7P2	110 aa		4.38	□□□□□ -1.71
FXR1-222	ENST00000498658	COA5	Q86WW8	74 aa		4.38	□□□□□ -1.71
FXR1-222	ENST00000498658	KRTAP5-9	P26371	169 aa		4.35	□□□□□ -1.71
FXR1-222	ENST00000498658		H7BZZ5	65 aa		4.33	□□□□□ -1.72
FXR1-222	ENST00000498658	KRTAP12-2	P59991	146 aa		4.33	□□□□□ -1.72
FXR1-222	ENST00000498658	CYSTM1	Q9H1C7	97 aa		4.33	□□□□□ -1.72
FXR1-222	ENST00000498658	SERP1	Q9Y6X1	66 aa		4.33	□□□□□ -1.72
FXR1-222	ENST00000498658	MUC12	Q9UKN1	5478 aa		4.32	□□□□□ -1.72
FXR1-222	ENST00000498658	TMEM258	P61165	79 aa		4.29	□□□□□ -1.72
FXR1-222	ENST00000498658	KRTAP8-1	Q8IUC2	63 aa		4.26	□□□□□ -1.73
FXR1-222	ENST00000498658	KMT2D	O14686	5537 aa		4.26	□□□□□ -1.73
FXR1-222	ENST00000498658	RPS28	P62857	69 aa	Known RBP	4.24	□□□□□ -1.73
FXR1-222	ENST00000498658	KRTAP20-1	Q3LI63	56 aa		4.24	□□□□□ -1.73
FXR1-222	ENST00000498658	KRTAP13-4	Q3LI77	160 aa		4.24	□□□□□ -1.73
FXR1-222	ENST00000498658	CAMK2N1	Q7Z7J9	78 aa		4.23	□□□□□ -1.73
FXR1-222	ENST00000498658	SPRR2F	Q96RM1	72 aa		4.23	□□□□□ -1.73
FXR1-222	ENST00000498658		A0A1B0GU33	70 aa		4.22	□□□□□ -1.73
FXR1-222	ENST00000498658	MDN1	Q9NU22	5596 aa		4.22	□□□□□ -1.73
FXR1-222	ENST00000498658	ATP5E	P56381	51 aa	Predicted RBP	4.21	□□□□□ -1.74
FXR1-222	ENST00000498658	KRTAP10-12	P60413	245 aa		4.21	□□□□□ -1.74
FXR1-222	ENST00000498658		A0A1B0GU69	56 aa		4.19	□□□□□ -1.74
FXR1-222	ENST00000498658	KRTAP10-7	P60409	375 aa	Predicted RBP	4.19	□□□□□ -1.74
FXR1-222	ENST00000498658		V9GYY9	64 aa		4.18	□□□□□ -1.74
FXR1-222	ENST00000498658	PRAC1	Q96KF2	57 aa		4.17	□□□□□ -1.74
FXR1-222	ENST00000498658		A0A0D9SG42	100 aa		4.16	□□□□□ -1.74
FXR1-222	ENST00000498658	SPRR2E	P22531	72 aa		4.15	□□□□□ -1.75
FXR1-222	ENST00000498658	SPRR2B	P35325	72 aa		4.15	□□□□□ -1.75
FXR1-222	ENST00000498658	SPRR2A	P35326	72 aa		4.15	□□□□□ -1.75
FXR1-222	ENST00000498658	SPATA8	Q6RVD6	105 aa		4.15	□□□□□ -1.75
FXR1-222	ENST00000498658	MT3	P25713	68 aa		4.14	□□□□□ -1.75
FXR1-222	ENST00000498658	SMIM26	A0A096LP01	95 aa		4.13	□□□□□ -1.75
FXR1-222	ENST00000498658	PRR15L	Q9BU68	103 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms