RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 H3BPC8 53 aa9.38□□□□□ -0.91
HLA-B-255ENST00000498007 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
HLA-B-255ENST00000498007 KRTAP9-6A0A140TA67 174 aa9.31□□□□□ -0.92
HLA-B-255ENST00000498007 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
HLA-B-255ENST00000498007 KRTAP9-3Q9BYQ3 159 aa9.29□□□□□ -0.92
HLA-B-255ENST00000498007 A8MUN3 132 aa9.27□□□□□ -0.93
HLA-B-255ENST00000498007 CRCT1Q9UGL9 99 aa9.26□□□□□ -0.93
HLA-B-255ENST00000498007 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
HLA-B-255ENST00000498007 USH2AO75445 5202 aa9.24□□□□□ -0.93
HLA-B-255ENST00000498007 LCE2BO14633 110 aa9.19□□□□□ -0.94
HLA-B-255ENST00000498007 NDUFC1O43677 76 aa9.18□□□□□ -0.94
HLA-B-255ENST00000498007 TMEM258P61165 79 aa9.15□□□□□ -0.94
HLA-B-255ENST00000498007 C20orf197Q8N268 126 aa9.15□□□□□ -0.94
HLA-B-255ENST00000498007 DMAC1Q96GE9 116 aa9.14□□□□□ -0.95
HLA-B-255ENST00000498007 SNURFQ9Y675 71 aa9.14□□□□□ -0.95
HLA-B-255ENST00000498007 SSPOA2VEC9 5147 aa9.1□□□□□ -0.95
HLA-B-255ENST00000498007 CYSTM1Q9H1C7 97 aa9.04□□□□□ -0.96
HLA-B-255ENST00000498007 ATP5EP56381 51 aaPredicted RBP9□□□□□ -0.97
HLA-B-255ENST00000498007 H7BZZ5 65 aa8.98□□□□□ -0.97
HLA-B-255ENST00000498007 ACYP2P14621 99 aa8.98□□□□□ -0.97
HLA-B-255ENST00000498007 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
HLA-B-255ENST00000498007 H0YAA0 97 aa8.96□□□□□ -0.98
HLA-B-255ENST00000498007 ADM2Q7Z4H4 148 aa8.94□□□□□ -0.98
HLA-B-255ENST00000498007 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
HLA-B-255ENST00000498007 SPANXA2-OT1Q8N9U9 137 aa8.91□□□□□ -0.98
HLA-B-255ENST00000498007 SPRR2GQ9BYE4 73 aa8.9□□□□□ -0.98
HLA-B-255ENST00000498007 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
HLA-B-255ENST00000498007 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
HLA-B-255ENST00000498007 SERP1Q9Y6X1 66 aa8.86□□□□□ -0.99
HLA-B-255ENST00000498007 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
HLA-B-255ENST00000498007 Q5VV11 94 aa8.81□□□□□ -1
HLA-B-255ENST00000498007 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
HLA-B-255ENST00000498007 KRTAP19-6Q3LI70 58 aa8.8□□□□□ -1
HLA-B-255ENST00000498007 KRTAP19-8Q3LI54 63 aa8.78□□□□□ -1
HLA-B-255ENST00000498007 P0C880 135 aa8.77□□□□□ -1.01
HLA-B-255ENST00000498007 MT1BP07438 61 aa8.76□□□□□ -1.01
HLA-B-255ENST00000498007 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
HLA-B-255ENST00000498007 R4GN34 69 aa8.69□□□□□ -1.02
HLA-B-255ENST00000498007 COA5Q86WW8 74 aa8.68□□□□□ -1.02
HLA-B-255ENST00000498007 SMIM26A0A096LP01 95 aa8.66□□□□□ -1.02
HLA-B-255ENST00000498007 M0QZ58 72 aa8.65□□□□□ -1.02
HLA-B-255ENST00000498007 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
HLA-B-255ENST00000498007 A6NN06 94 aa8.56□□□□□ -1.04
HLA-B-255ENST00000498007 LINC01554Q52M75 96 aa8.53□□□□□ -1.04
HLA-B-255ENST00000498007 MACF1Q9UPN3 7388 aaKnown RBP8.51□□□□□ -1.05
HLA-B-255ENST00000498007 KRTAP10-5P60370 271 aa8.49□□□□□ -1.05
HLA-B-255ENST00000498007 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
HLA-B-255ENST00000498007 V9GYY9 64 aa8.44□□□□□ -1.06
HLA-B-255ENST00000498007 KRTAP9-7A8MTY7 169 aa8.41□□□□□ -1.06
HLA-B-255ENST00000498007 SEC61GP60059 68 aa8.4□□□□□ -1.06
HLA-B-255ENST00000498007 Q1T7F1 81 aa8.39□□□□□ -1.07
HLA-B-255ENST00000498007 SYNE2Q8WXH0 6885 aaKnown RBP8.38□□□□□ -1.07
HLA-B-255ENST00000498007 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
HLA-B-255ENST00000498007 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
HLA-B-255ENST00000498007 MT1XP80297 61 aa8.31□□□□□ -1.08
HLA-B-255ENST00000498007 A0A1B0GU69 56 aa8.24□□□□□ -1.09
HLA-B-255ENST00000498007 A0A1B0GU33 70 aa8.21□□□□□ -1.1
HLA-B-255ENST00000498007 PSPHP1O15172 72 aa8.2□□□□□ -1.1
HLA-B-255ENST00000498007 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
HLA-B-255ENST00000498007 SPATA8Q6RVD6 105 aa8.18□□□□□ -1.1
HLA-B-255ENST00000498007 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
HLA-B-255ENST00000498007 A0A0D9SG42 100 aa8.15□□□□□ -1.1
HLA-B-255ENST00000498007 KRTAP6-3Q3LI67 103 aa8.13□□□□□ -1.11
HLA-B-255ENST00000498007 BRK1Q8WUW1 75 aa8.13□□□□□ -1.11
HLA-B-255ENST00000498007 SVIPQ8NHG7 77 aa8.12□□□□□ -1.11
HLA-B-255ENST00000498007 PRO0628Q9UI54 55 aa8.12□□□□□ -1.11
HLA-B-255ENST00000498007 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
HLA-B-255ENST00000498007 KMT2DO14686 5537 aa8.04□□□□□ -1.12
HLA-B-255ENST00000498007 A6NED7 52 aa8.02□□□□□ -1.13
HLA-B-255ENST00000498007 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
HLA-B-255ENST00000498007 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
HLA-B-255ENST00000498007 A8MU10 97 aa7.95□□□□□ -1.14
HLA-B-255ENST00000498007 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
HLA-B-255ENST00000498007 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
HLA-B-255ENST00000498007 MUC12Q9UKN1 5478 aa7.93□□□□□ -1.14
HLA-B-255ENST00000498007 KRTAP5-9P26371 169 aa7.9□□□□□ -1.14
HLA-B-255ENST00000498007 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.14
HLA-B-255ENST00000498007 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
HLA-B-255ENST00000498007 KRTAP10-12P60413 245 aa7.87□□□□□ -1.15
HLA-B-255ENST00000498007 KRTAP4-8A0A0G2JLE6 195 aa7.85□□□□□ -1.15
HLA-B-255ENST00000498007 KRTAP4-8Q9BYQ9 185 aa7.85□□□□□ -1.15
HLA-B-255ENST00000498007 NEBP20929 6669 aa7.81□□□□□ -1.16
HLA-B-255ENST00000498007 UQCR11O14957 56 aa7.81□□□□□ -1.16
HLA-B-255ENST00000498007 SPRR2FQ96RM1 72 aa7.8□□□□□ -1.16
HLA-B-255ENST00000498007 MDN1Q9NU22 5596 aa7.76□□□□□ -1.17
HLA-B-255ENST00000498007 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
HLA-B-255ENST00000498007 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
HLA-B-255ENST00000498007 SPRR2EP22531 72 aa7.61□□□□□ -1.19
HLA-B-255ENST00000498007 SPRR2BP35325 72 aa7.61□□□□□ -1.19
HLA-B-255ENST00000498007 SPRR2AP35326 72 aa7.61□□□□□ -1.19
HLA-B-255ENST00000498007 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
HLA-B-255ENST00000498007 LCE1AQ5T7P2 110 aa7.52□□□□□ -1.21
HLA-B-255ENST00000498007 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
HLA-B-255ENST00000498007 TNP1P09430 55 aa7.48□□□□□ -1.21
HLA-B-255ENST00000498007 K7ERS5 55 aa7.47□□□□□ -1.21
HLA-B-255ENST00000498007 KRTAP20-1Q3LI63 56 aa7.42□□□□□ -1.22
HLA-B-255ENST00000498007 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
HLA-B-255ENST00000498007 SPRR2DP22532 72 aa7.35□□□□□ -1.23
HLA-B-255ENST00000498007 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
HLA-B-255ENST00000498007 MT1EP04732 61 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms