RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 PKIGQ9Y2B9 76 aa2.78□□□□□ -1.96
GARNL3-221ENST00000497703 TRBV7-7A0A0K0K1E9 115 aa2.77□□□□□ -1.97
GARNL3-221ENST00000497703 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
GARNL3-221ENST00000497703 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
GARNL3-221ENST00000497703 PDE6GP18545 87 aa2.76□□□□□ -1.97
GARNL3-221ENST00000497703 UBE2BP63146 152 aa2.76□□□□□ -1.97
GARNL3-221ENST00000497703 Q6JHZ5 121 aa2.76□□□□□ -1.97
GARNL3-221ENST00000497703 DEFB105AQ8NG35 78 aa2.76□□□□□ -1.97
GARNL3-221ENST00000497703 DSCR8Q96T75 97 aa2.76□□□□□ -1.97
GARNL3-221ENST00000497703 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
GARNL3-221ENST00000497703 BCE1O60756 84 aa2.75□□□□□ -1.97
GARNL3-221ENST00000497703 SPRR1BP22528 89 aa2.75□□□□□ -1.97
GARNL3-221ENST00000497703 PRLHP81277 87 aa2.75□□□□□ -1.97
GARNL3-221ENST00000497703 IMUPQ9GZP8 106 aa2.75□□□□□ -1.97
GARNL3-221ENST00000497703 IGKV3D-7A0A0C4DH55 119 aa2.74□□□□□ -1.97
GARNL3-221ENST00000497703 MT1HP80294 61 aa2.74□□□□□ -1.97
GARNL3-221ENST00000497703 TPRXLQ17RH7 258 aa2.74□□□□□ -1.97
GARNL3-221ENST00000497703 PCOTHQ58A44 107 aa2.74□□□□□ -1.97
GARNL3-221ENST00000497703 RETNLBQ9BQ08 111 aa2.74□□□□□ -1.97
GARNL3-221ENST00000497703 C1orf137Q5JT78 98 aa2.73□□□□□ -1.97
GARNL3-221ENST00000497703 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
GARNL3-221ENST00000497703 KRTAP4-1Q9BYQ7 146 aa2.72□□□□□ -1.97
GARNL3-221ENST00000497703 UBL5Q9BZL1 73 aa2.72□□□□□ -1.97
GARNL3-221ENST00000497703 A0A087WVE0 104 aa2.71□□□□□ -1.98
GARNL3-221ENST00000497703 A0A0G2JQZ4 141 aa2.71□□□□□ -1.98
GARNL3-221ENST00000497703 A0A1B0GW54 56 aa2.71□□□□□ -1.98
GARNL3-221ENST00000497703 HIST1H4AP62805 103 aaKnown RBP2.71□□□□□ -1.98
GARNL3-221ENST00000497703 ASB16-AS1Q495Z4 193 aa2.71□□□□□ -1.98
GARNL3-221ENST00000497703 ATP5EP2Q5VTU8 51 aa2.71□□□□□ -1.98
GARNL3-221ENST00000497703 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
GARNL3-221ENST00000497703 FAM236AA0A1B0GUQ0 79 aa2.7□□□□□ -1.98
GARNL3-221ENST00000497703 FAM236BA0A1B0GV22 79 aa2.7□□□□□ -1.98
GARNL3-221ENST00000497703 F8WEM9 126 aa2.69□□□□□ -1.98
GARNL3-221ENST00000497703 NREPQ16612 68 aa2.69□□□□□ -1.98
GARNL3-221ENST00000497703 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
GARNL3-221ENST00000497703 CCDC179H3BU77 68 aa2.67□□□□□ -1.98
GARNL3-221ENST00000497703 A0A087WSZ3 146 aa2.66□□□□□ -1.98
GARNL3-221ENST00000497703 ATOX1O00244 68 aa2.66□□□□□ -1.98
GARNL3-221ENST00000497703 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
GARNL3-221ENST00000497703 USH2AO75445 5202 aa2.65□□□□□ -1.99
GARNL3-221ENST00000497703 COX6B2Q6YFQ2 88 aa2.65□□□□□ -1.99
GARNL3-221ENST00000497703 LINC00472Q9H8W2 130 aa2.65□□□□□ -1.99
GARNL3-221ENST00000497703 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
GARNL3-221ENST00000497703 COX7CP15954 63 aa2.64□□□□□ -1.99
GARNL3-221ENST00000497703 C9orf153Q5TBE3 101 aa2.64□□□□□ -1.99
GARNL3-221ENST00000497703 SERP2Q8N6R1 65 aa2.64□□□□□ -1.99
GARNL3-221ENST00000497703 K7EQZ3 153 aa2.63□□□□□ -1.99
GARNL3-221ENST00000497703 UQCRQO14949 82 aa2.63□□□□□ -1.99
GARNL3-221ENST00000497703 TMEM258P61165 79 aa2.63□□□□□ -1.99
GARNL3-221ENST00000497703 Q96NJ1 140 aa2.63□□□□□ -1.99
GARNL3-221ENST00000497703 TRAV7A0A075B6U4 112 aa2.62□□□□□ -1.99
GARNL3-221ENST00000497703 HRCT1Q6UXD1 115 aa2.62□□□□□ -1.99
GARNL3-221ENST00000497703 SSBP3-AS1Q7Z2R9 100 aa2.62□□□□□ -1.99
GARNL3-221ENST00000497703 NEBP20929 6669 aa2.62□□□□□ -1.99
GARNL3-221ENST00000497703 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
GARNL3-221ENST00000497703 SMIM20Q8N5G0 67 aa2.61□□□□□ -1.99
GARNL3-221ENST00000497703 J3KT08 172 aa2.6□□□□□ -1.99
GARNL3-221ENST00000497703 PRR15Q8IV56 129 aa2.6□□□□□ -1.99
GARNL3-221ENST00000497703 CYSTM1Q9H1C7 97 aa2.6□□□□□ -1.99
GARNL3-221ENST00000497703 HCG22E2RYF7 251 aa2.59□□□□□ -1.99
GARNL3-221ENST00000497703 SS18L2Q9UHA2 77 aa2.59□□□□□ -1.99
GARNL3-221ENST00000497703 MMP24-AS1A0A0U1RRL7 71 aa2.58□□□□□ -2
GARNL3-221ENST00000497703 Q5XG85 94 aa2.58□□□□□ -2
GARNL3-221ENST00000497703 FP248Q71RG6 208 aaPredicted RBP2.58□□□□□ -2
GARNL3-221ENST00000497703 WFDC13Q8IUB5 93 aa2.58□□□□□ -2
GARNL3-221ENST00000497703 KLKP1Q107X0 134 aa2.57□□□□□ -2
GARNL3-221ENST00000497703 C20orf197Q8N268 126 aa2.57□□□□□ -2
GARNL3-221ENST00000497703 MUC17Q685J3 4493 aa2.57□□□□□ -2
GARNL3-221ENST00000497703 NDUFB1O75438 58 aa2.56□□□□□ -2
GARNL3-221ENST00000497703 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
GARNL3-221ENST00000497703 C1orf195Q5TG92 126 aa2.56□□□□□ -2
GARNL3-221ENST00000497703 CASC2Q6XLA1 102 aa2.56□□□□□ -2
GARNL3-221ENST00000497703 TMEM254Q8TBM7 123 aa2.56□□□□□ -2
GARNL3-221ENST00000497703 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
GARNL3-221ENST00000497703 SNURFQ9Y675 71 aa2.56□□□□□ -2
GARNL3-221ENST00000497703 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
GARNL3-221ENST00000497703 hDV103S1A0JD37 113 aa2.55□□□□□ -2
GARNL3-221ENST00000497703 H7BZZ5 65 aa2.55□□□□□ -2
GARNL3-221ENST00000497703 COA5Q86WW8 74 aa2.53□□□□□ -2
GARNL3-221ENST00000497703 MRPL34Q9BQ48 92 aaKnown RBP2.53□□□□□ -2
GARNL3-221ENST00000497703 LIMD2Q9BT23 127 aa2.53□□□□□ -2
GARNL3-221ENST00000497703 SPINK1P00995 79 aa2.52□□□□□ -2.01
GARNL3-221ENST00000497703 RPS29P62273 56 aaKnown RBP2.52□□□□□ -2.01
GARNL3-221ENST00000497703 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
GARNL3-221ENST00000497703 SPAG11AQ6PDA7 123 aa2.52□□□□□ -2.01
GARNL3-221ENST00000497703 KTN1-AS1Q86SY8 53 aa2.52□□□□□ -2.01
GARNL3-221ENST00000497703 H0Y9P7 68 aa2.51□□□□□ -2.01
GARNL3-221ENST00000497703 NDUFC1O43677 76 aa2.51□□□□□ -2.01
GARNL3-221ENST00000497703 TP53AIP1Q9HCN2 124 aa2.51□□□□□ -2.01
GARNL3-221ENST00000497703 FAM236DA0A1B0GTK5 79 aa2.5□□□□□ -2.01
GARNL3-221ENST00000497703 FAM236CP0DP71 79 aa2.5□□□□□ -2.01
GARNL3-221ENST00000497703 LINC00208Q96KT6 92 aa2.5□□□□□ -2.01
GARNL3-221ENST00000497703 TRAV22A0A0B4J277 110 aa2.49□□□□□ -2.01
GARNL3-221ENST00000497703 RPS28P62857 69 aaKnown RBP2.49□□□□□ -2.01
GARNL3-221ENST00000497703 ATP5EP56381 51 aaPredicted RBP2.47□□□□□ -2.01
GARNL3-221ENST00000497703 CYP4F30PQ9H0H9 118 aa2.47□□□□□ -2.01
GARNL3-221ENST00000497703 SERP1Q9Y6X1 66 aa2.46□□□□□ -2.02
GARNL3-221ENST00000497703 A8MUN3 132 aa2.45□□□□□ -2.02
GARNL3-221ENST00000497703 MT2AP02795 61 aa2.45□□□□□ -2.02
GARNL3-221ENST00000497703 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms