RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
SMC4-226ENST00000497311 S4R3F8 94 aa7.8□□□□□ -1.16
SMC4-226ENST00000497311 SCGB1A1P11684 91 aa7.79□□□□□ -1.16
SMC4-226ENST00000497311 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
SMC4-226ENST00000497311 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
SMC4-226ENST00000497311 C1orf64Q8NEQ6 169 aa7.77□□□□□ -1.17
SMC4-226ENST00000497311 TRAV22A0A0B4J277 110 aa7.76□□□□□ -1.17
SMC4-226ENST00000497311 A6NN06 94 aa7.75□□□□□ -1.17
SMC4-226ENST00000497311 Q5VV11 94 aa7.74□□□□□ -1.17
SMC4-226ENST00000497311 LCA10Q71F78 164 aa7.74□□□□□ -1.17
SMC4-226ENST00000497311 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
SMC4-226ENST00000497311 MT1BP07438 61 aa7.73□□□□□ -1.17
SMC4-226ENST00000497311 A0A087WVE0 104 aa7.72□□□□□ -1.17
SMC4-226ENST00000497311 KRTAP4-8A0A0G2JLE6 195 aa7.72□□□□□ -1.17
SMC4-226ENST00000497311 UQCRQO14949 82 aa7.72□□□□□ -1.17
SMC4-226ENST00000497311 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.18
SMC4-226ENST00000497311 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
SMC4-226ENST00000497311 KRTAP19-8Q3LI54 63 aa7.69□□□□□ -1.18
SMC4-226ENST00000497311 NEBP20929 6669 aa7.66□□□□□ -1.18
SMC4-226ENST00000497311 H0Y9P7 68 aa7.66□□□□□ -1.18
SMC4-226ENST00000497311 ATOX1O00244 68 aa7.66□□□□□ -1.18
SMC4-226ENST00000497311 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.19
SMC4-226ENST00000497311 KLKP1Q107X0 134 aa7.64□□□□□ -1.19
SMC4-226ENST00000497311 PCP4P48539 62 aa7.6□□□□□ -1.19
SMC4-226ENST00000497311 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
SMC4-226ENST00000497311 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
SMC4-226ENST00000497311 LINC00208Q96KT6 92 aa7.55□□□□□ -1.2
SMC4-226ENST00000497311 ANAPC13Q9BS18 74 aa7.54□□□□□ -1.2
SMC4-226ENST00000497311 MP68P56378 58 aa7.53□□□□□ -1.2
SMC4-226ENST00000497311 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
SMC4-226ENST00000497311 LCE1DQ5T752 114 aa7.52□□□□□ -1.21
SMC4-226ENST00000497311 SMIM20Q8N5G0 67 aa7.49□□□□□ -1.21
SMC4-226ENST00000497311 A8MUN3 132 aa7.47□□□□□ -1.21
SMC4-226ENST00000497311 H3BPC8 53 aa7.46□□□□□ -1.22
SMC4-226ENST00000497311 KRTAP5-9P26371 169 aa7.45□□□□□ -1.22
SMC4-226ENST00000497311 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
SMC4-226ENST00000497311 H3BS24 57 aa7.44□□□□□ -1.22
SMC4-226ENST00000497311 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
SMC4-226ENST00000497311 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
SMC4-226ENST00000497311 KMT2DO14686 5537 aa7.42□□□□□ -1.22
SMC4-226ENST00000497311 TRAV7A0A075B6U4 112 aa7.41□□□□□ -1.22
SMC4-226ENST00000497311 NDUFC1O43677 76 aa7.41□□□□□ -1.22
SMC4-226ENST00000497311 KRTAP20-1Q3LI63 56 aa7.41□□□□□ -1.22
SMC4-226ENST00000497311 H0YAA0 97 aa7.4□□□□□ -1.22
SMC4-226ENST00000497311 COX7CP15954 63 aa7.4□□□□□ -1.22
SMC4-226ENST00000497311 LCE4AQ5TA78 99 aa7.39□□□□□ -1.23
SMC4-226ENST00000497311 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
SMC4-226ENST00000497311 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
SMC4-226ENST00000497311 CCDC179H3BU77 68 aa7.31□□□□□ -1.24
SMC4-226ENST00000497311 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
SMC4-226ENST00000497311 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
SMC4-226ENST00000497311 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
SMC4-226ENST00000497311 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
SMC4-226ENST00000497311 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
SMC4-226ENST00000497311 MT1XP80297 61 aa7.2□□□□□ -1.26
SMC4-226ENST00000497311 SPRR2FQ96RM1 72 aa7.19□□□□□ -1.26
SMC4-226ENST00000497311 KRTAP2-3P0C7H8 128 aa7.17□□□□□ -1.26
SMC4-226ENST00000497311 KRTAP2-4Q9BYR9 128 aa7.17□□□□□ -1.26
SMC4-226ENST00000497311 R4GN34 69 aa7.16□□□□□ -1.26
SMC4-226ENST00000497311 ACYP2P14621 99 aa7.15□□□□□ -1.26
SMC4-226ENST00000497311 SPRR2EP22531 72 aa7.14□□□□□ -1.27
SMC4-226ENST00000497311 SPRR2BP35325 72 aa7.14□□□□□ -1.27
SMC4-226ENST00000497311 SPRR2AP35326 72 aa7.14□□□□□ -1.27
SMC4-226ENST00000497311 SNURFQ9Y675 71 aa7.14□□□□□ -1.27
SMC4-226ENST00000497311 TMEM258P61165 79 aa7.13□□□□□ -1.27
SMC4-226ENST00000497311 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
SMC4-226ENST00000497311 P0C880 135 aa7.11□□□□□ -1.27
SMC4-226ENST00000497311 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
SMC4-226ENST00000497311 H7BZZ5 65 aa7.1□□□□□ -1.27
SMC4-226ENST00000497311 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
SMC4-226ENST00000497311 M0QZ58 72 aa7.08□□□□□ -1.28
SMC4-226ENST00000497311 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
SMC4-226ENST00000497311 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
SMC4-226ENST00000497311 KRTAP4-11Q9BYQ6 195 aa7.06□□□□□ -1.28
SMC4-226ENST00000497311 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
SMC4-226ENST00000497311 SPTSSBQ8NFR3 76 aa7.04□□□□□ -1.28
SMC4-226ENST00000497311 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
SMC4-226ENST00000497311 LINC01554Q52M75 96 aa7□□□□□ -1.29
SMC4-226ENST00000497311 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
SMC4-226ENST00000497311 LCE5AQ5TCM9 118 aa7□□□□□ -1.29
SMC4-226ENST00000497311 RPS28P62857 69 aaKnown RBP6.95□□□□□ -1.3
SMC4-226ENST00000497311 KRTAP2-2Q9BYT5 123 aa6.93□□□□□ -1.3
SMC4-226ENST00000497311 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
SMC4-226ENST00000497311 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
SMC4-226ENST00000497311 SPRR2DP22532 72 aa6.9□□□□□ -1.3
SMC4-226ENST00000497311 KRTAP10-7P60409 375 aaPredicted RBP6.88□□□□□ -1.31
SMC4-226ENST00000497311 KRTAP10-12P60413 245 aa6.84□□□□□ -1.31
SMC4-226ENST00000497311 COA5Q86WW8 74 aa6.81□□□□□ -1.32
SMC4-226ENST00000497311 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
SMC4-226ENST00000497311 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
SMC4-226ENST00000497311 SEC61GP60059 68 aa6.65□□□□□ -1.34
SMC4-226ENST00000497311 V9GYY9 64 aa6.64□□□□□ -1.35
SMC4-226ENST00000497311 Q1T7F1 81 aa6.6□□□□□ -1.35
SMC4-226ENST00000497311 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
SMC4-226ENST00000497311 A0A1B0GU33 70 aa6.53□□□□□ -1.36
SMC4-226ENST00000497311 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
SMC4-226ENST00000497311 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
SMC4-226ENST00000497311 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
SMC4-226ENST00000497311 A0A0D9SG42 100 aa6.47□□□□□ -1.37
SMC4-226ENST00000497311 A0A1B0GU69 56 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms