RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 USH2AO75445 5202 aa8.97□□□□□ -0.97
CTDSP1-213ENST00000496785 FAM236AA0A1B0GUQ0 79 aa8.96□□□□□ -0.98
CTDSP1-213ENST00000496785 FAM236BA0A1B0GV22 79 aa8.96□□□□□ -0.98
CTDSP1-213ENST00000496785 NDUFC1O43677 76 aa8.91□□□□□ -0.98
CTDSP1-213ENST00000496785 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
CTDSP1-213ENST00000496785 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
CTDSP1-213ENST00000496785 SSPOA2VEC9 5147 aa8.8□□□□□ -1
CTDSP1-213ENST00000496785 DMAC1Q96GE9 116 aa8.79□□□□□ -1
CTDSP1-213ENST00000496785 H0YAA0 97 aa8.76□□□□□ -1.01
CTDSP1-213ENST00000496785 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
CTDSP1-213ENST00000496785 CRIPTQ9P021 101 aa8.73□□□□□ -1.01
CTDSP1-213ENST00000496785 SPRR2GQ9BYE4 73 aa8.7□□□□□ -1.02
CTDSP1-213ENST00000496785 KRTAP19-6Q3LI70 58 aa8.69□□□□□ -1.02
CTDSP1-213ENST00000496785 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
CTDSP1-213ENST00000496785 ACYP2P14621 99 aa8.66□□□□□ -1.02
CTDSP1-213ENST00000496785 Q5VV11 94 aa8.63□□□□□ -1.03
CTDSP1-213ENST00000496785 FCGBPQ9Y6R7 5405 aaPredicted RBP8.63□□□□□ -1.03
CTDSP1-213ENST00000496785 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
CTDSP1-213ENST00000496785 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
CTDSP1-213ENST00000496785 KRTAP19-8Q3LI54 63 aa8.6□□□□□ -1.03
CTDSP1-213ENST00000496785 C20orf197Q8N268 126 aa8.6□□□□□ -1.03
CTDSP1-213ENST00000496785 SPTSSBQ8NFR3 76 aa8.58□□□□□ -1.04
CTDSP1-213ENST00000496785 SPANXA2-OT1Q8N9U9 137 aa8.56□□□□□ -1.04
CTDSP1-213ENST00000496785 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
CTDSP1-213ENST00000496785 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
CTDSP1-213ENST00000496785 MT1BP07438 61 aa8.52□□□□□ -1.05
CTDSP1-213ENST00000496785 COX7CP15954 63 aa8.46□□□□□ -1.06
CTDSP1-213ENST00000496785 R4GN34 69 aa8.45□□□□□ -1.06
CTDSP1-213ENST00000496785 KRTAP9-7A8MTY7 169 aa8.44□□□□□ -1.06
CTDSP1-213ENST00000496785 A6NN06 94 aa8.42□□□□□ -1.06
CTDSP1-213ENST00000496785 P0C880 135 aa8.42□□□□□ -1.06
CTDSP1-213ENST00000496785 M0QZ58 72 aa8.36□□□□□ -1.07
CTDSP1-213ENST00000496785 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
CTDSP1-213ENST00000496785 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
CTDSP1-213ENST00000496785 ANAPC13Q9BS18 74 aa8.3□□□□□ -1.08
CTDSP1-213ENST00000496785 MACF1Q9UPN3 7388 aaKnown RBP8.29□□□□□ -1.08
CTDSP1-213ENST00000496785 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
CTDSP1-213ENST00000496785 COA5Q86WW8 74 aa8.26□□□□□ -1.09
CTDSP1-213ENST00000496785 H7BZZ5 65 aa8.25□□□□□ -1.09
CTDSP1-213ENST00000496785 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
CTDSP1-213ENST00000496785 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.1
CTDSP1-213ENST00000496785 CYSTM1Q9H1C7 97 aa8.17□□□□□ -1.1
CTDSP1-213ENST00000496785 SEC61GP60059 68 aa8.13□□□□□ -1.11
CTDSP1-213ENST00000496785 SYNE2Q8WXH0 6885 aaKnown RBP8.12□□□□□ -1.11
CTDSP1-213ENST00000496785 KRTAP6-3Q3LI67 103 aa8.11□□□□□ -1.11
CTDSP1-213ENST00000496785 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
CTDSP1-213ENST00000496785 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
CTDSP1-213ENST00000496785 MT1XP80297 61 aa8.05□□□□□ -1.12
CTDSP1-213ENST00000496785 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
CTDSP1-213ENST00000496785 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
CTDSP1-213ENST00000496785 A0A1B0GU33 70 aa7.9□□□□□ -1.14
CTDSP1-213ENST00000496785 A0A1B0GU69 56 aa7.88□□□□□ -1.15
CTDSP1-213ENST00000496785 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
CTDSP1-213ENST00000496785 TMEM258P61165 79 aa7.86□□□□□ -1.15
CTDSP1-213ENST00000496785 KRTAP5-9P26371 169 aa7.82□□□□□ -1.16
CTDSP1-213ENST00000496785 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
CTDSP1-213ENST00000496785 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
CTDSP1-213ENST00000496785 A0A0D9SG42 100 aa7.78□□□□□ -1.16
CTDSP1-213ENST00000496785 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
CTDSP1-213ENST00000496785 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
CTDSP1-213ENST00000496785 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
CTDSP1-213ENST00000496785 SPINT4Q6UDR6 99 aa7.69□□□□□ -1.18
CTDSP1-213ENST00000496785 MUC12Q9UKN1 5478 aa7.68□□□□□ -1.18
CTDSP1-213ENST00000496785 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
CTDSP1-213ENST00000496785 KRTAP10-12P60413 245 aa7.68□□□□□ -1.18
CTDSP1-213ENST00000496785 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
CTDSP1-213ENST00000496785 KMT2DO14686 5537 aa7.67□□□□□ -1.18
CTDSP1-213ENST00000496785 SPRR2FQ96RM1 72 aa7.65□□□□□ -1.18
CTDSP1-213ENST00000496785 NEBP20929 6669 aa7.64□□□□□ -1.19
CTDSP1-213ENST00000496785 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
CTDSP1-213ENST00000496785 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
CTDSP1-213ENST00000496785 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
CTDSP1-213ENST00000496785 MDN1Q9NU22 5596 aa7.57□□□□□ -1.2
CTDSP1-213ENST00000496785 A8MU10 97 aa7.53□□□□□ -1.2
CTDSP1-213ENST00000496785 UQCR11O14957 56 aa7.49□□□□□ -1.21
CTDSP1-213ENST00000496785 SPRR2EP22531 72 aa7.49□□□□□ -1.21
CTDSP1-213ENST00000496785 SPRR2BP35325 72 aa7.49□□□□□ -1.21
CTDSP1-213ENST00000496785 SPRR2AP35326 72 aa7.49□□□□□ -1.21
CTDSP1-213ENST00000496785 V9GYY9 64 aa7.45□□□□□ -1.22
CTDSP1-213ENST00000496785 KRTAP20-1Q3LI63 56 aa7.4□□□□□ -1.22
CTDSP1-213ENST00000496785 LCE1AQ5T7P2 110 aa7.39□□□□□ -1.23
CTDSP1-213ENST00000496785 Q1T7F1 81 aa7.33□□□□□ -1.24
CTDSP1-213ENST00000496785 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
CTDSP1-213ENST00000496785 KRTAP2-3P0C7H8 128 aa7.28□□□□□ -1.24
CTDSP1-213ENST00000496785 KRTAP2-4Q9BYR9 128 aa7.28□□□□□ -1.24
CTDSP1-213ENST00000496785 TNP1P09430 55 aa7.27□□□□□ -1.25
CTDSP1-213ENST00000496785 PCP4P48539 62 aa7.27□□□□□ -1.25
CTDSP1-213ENST00000496785 PSPHP1O15172 72 aa7.26□□□□□ -1.25
CTDSP1-213ENST00000496785 SPRR2DP22532 72 aa7.24□□□□□ -1.25
CTDSP1-213ENST00000496785 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
CTDSP1-213ENST00000496785 K7ERS5 55 aa7.22□□□□□ -1.25
CTDSP1-213ENST00000496785 KRTAP19-7Q3SYF9 63 aa7.19□□□□□ -1.26
CTDSP1-213ENST00000496785 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
CTDSP1-213ENST00000496785 MT1EP04732 61 aa7.14□□□□□ -1.27
CTDSP1-213ENST00000496785 A6NED7 52 aa7.09□□□□□ -1.27
CTDSP1-213ENST00000496785 KRTAP19-5Q3LI72 72 aa7.09□□□□□ -1.27
CTDSP1-213ENST00000496785 KRTAP2-2Q9BYT5 123 aa7.07□□□□□ -1.28
CTDSP1-213ENST00000496785 KRTAP2-1Q9BYU5 128 aa7.07□□□□□ -1.28
CTDSP1-213ENST00000496785 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
CTDSP1-213ENST00000496785 KRTAP19-3Q7Z4W3 81 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms