RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
SMARCD3-215ENST00000496530 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
SMARCD3-215ENST00000496530 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
SMARCD3-215ENST00000496530 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
SMARCD3-215ENST00000496530 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
SMARCD3-215ENST00000496530 FAM236CP0DP71 79 aa4.21□□□□□ -1.74
SMARCD3-215ENST00000496530 C7orf65Q6ZTY9 151 aa4.21□□□□□ -1.74
SMARCD3-215ENST00000496530 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
SMARCD3-215ENST00000496530 LOC101927531A0A1B0GV80 90 aa4.2□□□□□ -1.74
SMARCD3-215ENST00000496530 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
SMARCD3-215ENST00000496530 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
SMARCD3-215ENST00000496530 H3BPC8 53 aa4.18□□□□□ -1.74
SMARCD3-215ENST00000496530 MT1HP80294 61 aa4.18□□□□□ -1.74
SMARCD3-215ENST00000496530 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
SMARCD3-215ENST00000496530 C20orf197Q8N268 126 aa4.18□□□□□ -1.74
SMARCD3-215ENST00000496530 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
SMARCD3-215ENST00000496530 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
SMARCD3-215ENST00000496530 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
SMARCD3-215ENST00000496530 COX7CP15954 63 aa4.16□□□□□ -1.74
SMARCD3-215ENST00000496530 KLKP1Q107X0 134 aa4.15□□□□□ -1.75
SMARCD3-215ENST00000496530 HRES1P13985 223 aa4.14□□□□□ -1.75
SMARCD3-215ENST00000496530 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
SMARCD3-215ENST00000496530 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
SMARCD3-215ENST00000496530 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
SMARCD3-215ENST00000496530 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
SMARCD3-215ENST00000496530 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.75
SMARCD3-215ENST00000496530 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
SMARCD3-215ENST00000496530 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
SMARCD3-215ENST00000496530 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
SMARCD3-215ENST00000496530 NDUFC1O43677 76 aa4.05□□□□□ -1.76
SMARCD3-215ENST00000496530 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
SMARCD3-215ENST00000496530 ACYP2P14621 99 aa4.04□□□□□ -1.76
SMARCD3-215ENST00000496530 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
SMARCD3-215ENST00000496530 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
SMARCD3-215ENST00000496530 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
SMARCD3-215ENST00000496530 S4R3F8 94 aa4.01□□□□□ -1.77
SMARCD3-215ENST00000496530 A8MUN3 132 aa4□□□□□ -1.77
SMARCD3-215ENST00000496530 CHKB-CPT1BH3BT56 60 aa4□□□□□ -1.77
SMARCD3-215ENST00000496530 H7BZZ5 65 aa3.99□□□□□ -1.77
SMARCD3-215ENST00000496530 SPANXA2-OT1Q8N9U9 137 aa3.99□□□□□ -1.77
SMARCD3-215ENST00000496530 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
SMARCD3-215ENST00000496530 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
SMARCD3-215ENST00000496530 LCA10Q71F78 164 aa3.97□□□□□ -1.77
SMARCD3-215ENST00000496530 DMAC1Q96GE9 116 aa3.97□□□□□ -1.77
SMARCD3-215ENST00000496530 PSPHP1O15172 72 aa3.95□□□□□ -1.78
SMARCD3-215ENST00000496530 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
SMARCD3-215ENST00000496530 SPTSSBQ8NFR3 76 aa3.93□□□□□ -1.78
SMARCD3-215ENST00000496530 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
SMARCD3-215ENST00000496530 COA5Q86WW8 74 aa3.92□□□□□ -1.78
SMARCD3-215ENST00000496530 MT2AP02795 61 aa3.91□□□□□ -1.78
SMARCD3-215ENST00000496530 TMEM258P61165 79 aa3.91□□□□□ -1.78
SMARCD3-215ENST00000496530 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
SMARCD3-215ENST00000496530 MT1FP04733 61 aa3.87□□□□□ -1.79
SMARCD3-215ENST00000496530 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
SMARCD3-215ENST00000496530 ADM2Q7Z4H4 148 aa3.84□□□□□ -1.79
SMARCD3-215ENST00000496530 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
SMARCD3-215ENST00000496530 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
SMARCD3-215ENST00000496530 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
SMARCD3-215ENST00000496530 A0A1B0GU69 56 aa3.75□□□□□ -1.81
SMARCD3-215ENST00000496530 P0C880 135 aa3.75□□□□□ -1.81
SMARCD3-215ENST00000496530 H0YAA0 97 aa3.74□□□□□ -1.81
SMARCD3-215ENST00000496530 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
SMARCD3-215ENST00000496530 CRIPTQ9P021 101 aa3.72□□□□□ -1.81
SMARCD3-215ENST00000496530 R4GN34 69 aa3.71□□□□□ -1.82
SMARCD3-215ENST00000496530 M0QZ58 72 aa3.7□□□□□ -1.82
SMARCD3-215ENST00000496530 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
SMARCD3-215ENST00000496530 LINC01558Q9Y6Z2 57 aa3.7□□□□□ -1.82
SMARCD3-215ENST00000496530 A0A1B0GU33 70 aa3.69□□□□□ -1.82
SMARCD3-215ENST00000496530 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
SMARCD3-215ENST00000496530 BRK1Q8WUW1 75 aa3.69□□□□□ -1.82
SMARCD3-215ENST00000496530 Q5VV11 94 aa3.68□□□□□ -1.82
SMARCD3-215ENST00000496530 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
SMARCD3-215ENST00000496530 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
SMARCD3-215ENST00000496530 Q1T7F1 81 aa3.65□□□□□ -1.83
SMARCD3-215ENST00000496530 SSPOA2VEC9 5147 aa3.65□□□□□ -1.83
SMARCD3-215ENST00000496530 USH2AO75445 5202 aa3.64□□□□□ -1.83
SMARCD3-215ENST00000496530 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
SMARCD3-215ENST00000496530 A0A0D9SG42 100 aa3.63□□□□□ -1.83
SMARCD3-215ENST00000496530 K7ERS5 55 aa3.61□□□□□ -1.83
SMARCD3-215ENST00000496530 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
SMARCD3-215ENST00000496530 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
SMARCD3-215ENST00000496530 A6NN06 94 aa3.59□□□□□ -1.83
SMARCD3-215ENST00000496530 UQCR11O14957 56 aa3.59□□□□□ -1.83
SMARCD3-215ENST00000496530 KRTAP13-4Q3LI77 160 aa3.58□□□□□ -1.84
SMARCD3-215ENST00000496530 MT1BP07438 61 aa3.57□□□□□ -1.84
SMARCD3-215ENST00000496530 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
SMARCD3-215ENST00000496530 A6NED7 52 aa3.56□□□□□ -1.84
SMARCD3-215ENST00000496530 NEBP20929 6669 aa3.56□□□□□ -1.84
SMARCD3-215ENST00000496530 A8MU10 97 aa3.55□□□□□ -1.84
SMARCD3-215ENST00000496530 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
SMARCD3-215ENST00000496530 KRTAP20-1Q3LI63 56 aa3.55□□□□□ -1.84
SMARCD3-215ENST00000496530 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
SMARCD3-215ENST00000496530 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
SMARCD3-215ENST00000496530 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
SMARCD3-215ENST00000496530 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
SMARCD3-215ENST00000496530 KRTAP10-5P60370 271 aa3.51□□□□□ -1.85
SMARCD3-215ENST00000496530 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
SMARCD3-215ENST00000496530 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
SMARCD3-215ENST00000496530 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
SMARCD3-215ENST00000496530 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms