RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 S4R3F8 94 aa4.48□□□□□ -1.69
U2AF1-212ENST00000496462 HRES1P13985 223 aa4.47□□□□□ -1.69
U2AF1-212ENST00000496462 KRTAP3-3Q9BYR6 98 aa4.47□□□□□ -1.69
U2AF1-212ENST00000496462 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
U2AF1-212ENST00000496462 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
U2AF1-212ENST00000496462 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
U2AF1-212ENST00000496462 SPANXA2-OT1Q8N9U9 137 aa4.43□□□□□ -1.7
U2AF1-212ENST00000496462 SERP1Q9Y6X1 66 aa4.43□□□□□ -1.7
U2AF1-212ENST00000496462 SMIM26A0A096LP01 95 aa4.41□□□□□ -1.7
U2AF1-212ENST00000496462 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
U2AF1-212ENST00000496462 A8MU10 97 aa4.4□□□□□ -1.7
U2AF1-212ENST00000496462 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
U2AF1-212ENST00000496462 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
U2AF1-212ENST00000496462 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
U2AF1-212ENST00000496462 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
U2AF1-212ENST00000496462 DMAC1Q96GE9 116 aa4.35□□□□□ -1.71
U2AF1-212ENST00000496462 COA5Q86WW8 74 aa4.3□□□□□ -1.72
U2AF1-212ENST00000496462 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
U2AF1-212ENST00000496462 LCA10Q71F78 164 aa4.27□□□□□ -1.73
U2AF1-212ENST00000496462 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
U2AF1-212ENST00000496462 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
U2AF1-212ENST00000496462 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
U2AF1-212ENST00000496462 A0A1B0GU69 56 aa4.24□□□□□ -1.73
U2AF1-212ENST00000496462 PSPHP1O15172 72 aa4.23□□□□□ -1.73
U2AF1-212ENST00000496462 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
U2AF1-212ENST00000496462 R4GN34 69 aa4.21□□□□□ -1.73
U2AF1-212ENST00000496462 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
U2AF1-212ENST00000496462 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
U2AF1-212ENST00000496462 K7ERS5 55 aa4.2□□□□□ -1.74
U2AF1-212ENST00000496462 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
U2AF1-212ENST00000496462 MT1HP80294 61 aa4.2□□□□□ -1.74
U2AF1-212ENST00000496462 Q1T7F1 81 aa4.19□□□□□ -1.74
U2AF1-212ENST00000496462 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
U2AF1-212ENST00000496462 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
U2AF1-212ENST00000496462 Q5VV11 94 aa4.16□□□□□ -1.74
U2AF1-212ENST00000496462 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
U2AF1-212ENST00000496462 H0YAA0 97 aa4.14□□□□□ -1.75
U2AF1-212ENST00000496462 M0QZ58 72 aa4.13□□□□□ -1.75
U2AF1-212ENST00000496462 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
U2AF1-212ENST00000496462 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
U2AF1-212ENST00000496462 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
U2AF1-212ENST00000496462 A6NN06 94 aa4.1□□□□□ -1.75
U2AF1-212ENST00000496462 A0A1B0GU33 70 aa4.1□□□□□ -1.75
U2AF1-212ENST00000496462 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
U2AF1-212ENST00000496462 A6NED7 52 aa4.08□□□□□ -1.76
U2AF1-212ENST00000496462 UQCR11O14957 56 aa4.08□□□□□ -1.76
U2AF1-212ENST00000496462 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
U2AF1-212ENST00000496462 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
U2AF1-212ENST00000496462 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
U2AF1-212ENST00000496462 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
U2AF1-212ENST00000496462 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
U2AF1-212ENST00000496462 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
U2AF1-212ENST00000496462 A0A0D9SG42 100 aa3.99□□□□□ -1.77
U2AF1-212ENST00000496462 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
U2AF1-212ENST00000496462 MT2AP02795 61 aa3.98□□□□□ -1.77
U2AF1-212ENST00000496462 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
U2AF1-212ENST00000496462 P0C880 135 aa3.95□□□□□ -1.78
U2AF1-212ENST00000496462 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
U2AF1-212ENST00000496462 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
U2AF1-212ENST00000496462 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
U2AF1-212ENST00000496462 MT1FP04733 61 aa3.91□□□□□ -1.78
U2AF1-212ENST00000496462 ROMO1P60602 79 aa3.9□□□□□ -1.79
U2AF1-212ENST00000496462 SPATA8Q6RVD6 105 aa3.87□□□□□ -1.79
U2AF1-212ENST00000496462 USH2AO75445 5202 aa3.87□□□□□ -1.79
U2AF1-212ENST00000496462 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.8
U2AF1-212ENST00000496462 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
U2AF1-212ENST00000496462 LCE2BO14633 110 aa3.81□□□□□ -1.8
U2AF1-212ENST00000496462 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
U2AF1-212ENST00000496462 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
U2AF1-212ENST00000496462 KRTAP19-1Q8IUB9 90 aa3.77□□□□□ -1.81
U2AF1-212ENST00000496462 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
U2AF1-212ENST00000496462 TNP1P09430 55 aa3.74□□□□□ -1.81
U2AF1-212ENST00000496462 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
U2AF1-212ENST00000496462 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
U2AF1-212ENST00000496462 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.81
U2AF1-212ENST00000496462 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
U2AF1-212ENST00000496462 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
U2AF1-212ENST00000496462 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
U2AF1-212ENST00000496462 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
U2AF1-212ENST00000496462 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
U2AF1-212ENST00000496462 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
U2AF1-212ENST00000496462 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
U2AF1-212ENST00000496462 MT1BP07438 61 aa3.62□□□□□ -1.83
U2AF1-212ENST00000496462 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
U2AF1-212ENST00000496462 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
U2AF1-212ENST00000496462 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
U2AF1-212ENST00000496462 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
U2AF1-212ENST00000496462 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
U2AF1-212ENST00000496462 MT1XP80297 61 aa3.47□□□□□ -1.85
U2AF1-212ENST00000496462 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
U2AF1-212ENST00000496462 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
U2AF1-212ENST00000496462 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
U2AF1-212ENST00000496462 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
U2AF1-212ENST00000496462 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
U2AF1-212ENST00000496462 KMT2DO14686 5537 aa3.36□□□□□ -1.87
U2AF1-212ENST00000496462 NEBP20929 6669 aa3.33□□□□□ -1.88
U2AF1-212ENST00000496462 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
U2AF1-212ENST00000496462 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
U2AF1-212ENST00000496462 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
U2AF1-212ENST00000496462 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms