RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 DNAH8Q96JB1 4490 aa4.98□□□□□ -1.61
HPS4-217ENST00000496385 FAT1Q14517 4588 aa4.98□□□□□ -1.61
HPS4-217ENST00000496385 Q8N1X5 172 aa4.97□□□□□ -1.61
HPS4-217ENST00000496385 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
HPS4-217ENST00000496385 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
HPS4-217ENST00000496385 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
HPS4-217ENST00000496385 HERC2O95714 4834 aa4.94□□□□□ -1.62
HPS4-217ENST00000496385 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
HPS4-217ENST00000496385 Q5VSD8 79 aa4.93□□□□□ -1.62
HPS4-217ENST00000496385 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
HPS4-217ENST00000496385 VPS13BQ7Z7G8 4022 aa4.92□□□□□ -1.62
HPS4-217ENST00000496385 RPL37P61927 97 aaKnown RBP4.91□□□□□ -1.62
HPS4-217ENST00000496385 FLG2Q5D862 2391 aaPredicted RBP4.91□□□□□ -1.62
HPS4-217ENST00000496385 ABCA13Q86UQ4 5058 aa4.9□□□□□ -1.62
HPS4-217ENST00000496385 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
HPS4-217ENST00000496385 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
HPS4-217ENST00000496385 KRTAP13-2Q52LG2 175 aa4.87□□□□□ -1.63
HPS4-217ENST00000496385 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
HPS4-217ENST00000496385 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
HPS4-217ENST00000496385 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
HPS4-217ENST00000496385 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
HPS4-217ENST00000496385 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
HPS4-217ENST00000496385 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
HPS4-217ENST00000496385 DMBT1Q9UGM3 2413 aaPredicted RBP4.76□□□□□ -1.65
HPS4-217ENST00000496385 KRTAP1-4P0C5Y4 121 aa4.75□□□□□ -1.65
HPS4-217ENST00000496385 KRTAP10-6P60371 365 aaPredicted RBP4.74□□□□□ -1.65
HPS4-217ENST00000496385 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
HPS4-217ENST00000496385 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
HPS4-217ENST00000496385 FAT3Q8TDW7 4589 aa4.72□□□□□ -1.65
HPS4-217ENST00000496385 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
HPS4-217ENST00000496385 HERC1Q15751 4861 aa4.7□□□□□ -1.66
HPS4-217ENST00000496385 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
HPS4-217ENST00000496385 S4R3F8 94 aa4.69□□□□□ -1.66
HPS4-217ENST00000496385 A0A0D9SG42 100 aa4.68□□□□□ -1.66
HPS4-217ENST00000496385 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
HPS4-217ENST00000496385 XP32Q5T750 250 aa4.68□□□□□ -1.66
HPS4-217ENST00000496385 TNXBP22105 4242 aa4.65□□□□□ -1.66
HPS4-217ENST00000496385 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
HPS4-217ENST00000496385 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
HPS4-217ENST00000496385 C9orf92A6NGG3 77 aa4.59□□□□□ -1.68
HPS4-217ENST00000496385 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
HPS4-217ENST00000496385 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
HPS4-217ENST00000496385 M0QZ58 72 aa4.53□□□□□ -1.68
HPS4-217ENST00000496385 LCE2BO14633 110 aa4.52□□□□□ -1.69
HPS4-217ENST00000496385 HMCN2Q8NDA2 5059 aa4.5□□□□□ -1.69
HPS4-217ENST00000496385 LPAP08519 4548 aa4.5□□□□□ -1.69
HPS4-217ENST00000496385 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
HPS4-217ENST00000496385 LRP2P98164 4655 aa4.49□□□□□ -1.69
HPS4-217ENST00000496385 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
HPS4-217ENST00000496385 UBR4Q5T4S7 5183 aa4.43□□□□□ -1.7
HPS4-217ENST00000496385 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
HPS4-217ENST00000496385 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
HPS4-217ENST00000496385 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
HPS4-217ENST00000496385 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
HPS4-217ENST00000496385 MUC2Q02817 5179 aa4.33□□□□□ -1.72
HPS4-217ENST00000496385 R4GN34 69 aa4.24□□□□□ -1.73
HPS4-217ENST00000496385 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
HPS4-217ENST00000496385 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
HPS4-217ENST00000496385 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.73
HPS4-217ENST00000496385 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
HPS4-217ENST00000496385 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
HPS4-217ENST00000496385 INE1O15225 51 aa4.12□□□□□ -1.75
HPS4-217ENST00000496385 LORP23490 312 aaPredicted RBP4.1□□□□□ -1.75
HPS4-217ENST00000496385 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
HPS4-217ENST00000496385 TNP1P09430 55 aa4.02□□□□□ -1.77
HPS4-217ENST00000496385 MT1HP80294 61 aa3.97□□□□□ -1.77
HPS4-217ENST00000496385 M0R2T5 61 aa3.95□□□□□ -1.78
HPS4-217ENST00000496385 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
HPS4-217ENST00000496385 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
HPS4-217ENST00000496385 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
HPS4-217ENST00000496385 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
HPS4-217ENST00000496385 MT2AP02795 61 aa3.75□□□□□ -1.81
HPS4-217ENST00000496385 MT1FP04733 61 aa3.74□□□□□ -1.81
HPS4-217ENST00000496385 KRTAP10-10P60014 251 aa3.73□□□□□ -1.81
HPS4-217ENST00000496385 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
HPS4-217ENST00000496385 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
HPS4-217ENST00000496385 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
HPS4-217ENST00000496385 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
HPS4-217ENST00000496385 USH2AO75445 5202 aa3.63□□□□□ -1.83
HPS4-217ENST00000496385 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
HPS4-217ENST00000496385 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
HPS4-217ENST00000496385 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
HPS4-217ENST00000496385 KRTAP19-1Q8IUB9 90 aa3.55□□□□□ -1.84
HPS4-217ENST00000496385 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
HPS4-217ENST00000496385 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
HPS4-217ENST00000496385 MT1BP07438 61 aa3.46□□□□□ -1.86
HPS4-217ENST00000496385 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
HPS4-217ENST00000496385 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
HPS4-217ENST00000496385 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
HPS4-217ENST00000496385 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
HPS4-217ENST00000496385 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
HPS4-217ENST00000496385 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
HPS4-217ENST00000496385 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
HPS4-217ENST00000496385 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
HPS4-217ENST00000496385 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
HPS4-217ENST00000496385 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
HPS4-217ENST00000496385 MT1XP80297 61 aa3.32□□□□□ -1.88
HPS4-217ENST00000496385 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
HPS4-217ENST00000496385 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.89
HPS4-217ENST00000496385 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms