RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 SPINK7P58062 85 aa7.16□□□□□ -1.26
CXCL12-208ENST00000496375 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.26
CXCL12-208ENST00000496375 H0Y9P7 68 aa7.13□□□□□ -1.27
CXCL12-208ENST00000496375 MT1FP04733 61 aa7.13□□□□□ -1.27
CXCL12-208ENST00000496375 Q5W150 140 aa7.11□□□□□ -1.27
CXCL12-208ENST00000496375 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
CXCL12-208ENST00000496375 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
CXCL12-208ENST00000496375 LCE2BO14633 110 aa7.09□□□□□ -1.27
CXCL12-208ENST00000496375 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
CXCL12-208ENST00000496375 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.28
CXCL12-208ENST00000496375 C1orf64Q8NEQ6 169 aa7.07□□□□□ -1.28
CXCL12-208ENST00000496375 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
CXCL12-208ENST00000496375 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
CXCL12-208ENST00000496375 SPANXA2-OT1Q8N9U9 137 aa7.05□□□□□ -1.28
CXCL12-208ENST00000496375 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
CXCL12-208ENST00000496375 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
CXCL12-208ENST00000496375 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
CXCL12-208ENST00000496375 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
CXCL12-208ENST00000496375 IGKV2D-30A0A075B6S6 120 aa6.99□□□□□ -1.29
CXCL12-208ENST00000496375 IGKV2-30P06310 120 aa6.99□□□□□ -1.29
CXCL12-208ENST00000496375 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
CXCL12-208ENST00000496375 H1FX-AS1Q4G0G2 97 aa6.89□□□□□ -1.31
CXCL12-208ENST00000496375 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
CXCL12-208ENST00000496375 KRTAP19-6Q3LI70 58 aa6.86□□□□□ -1.31
CXCL12-208ENST00000496375 V9GYY9 64 aa6.83□□□□□ -1.32
CXCL12-208ENST00000496375 Q1T7F1 81 aa6.82□□□□□ -1.32
CXCL12-208ENST00000496375 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
CXCL12-208ENST00000496375 COA5Q86WW8 74 aa6.79□□□□□ -1.32
CXCL12-208ENST00000496375 ACYP2P14621 99 aa6.77□□□□□ -1.33
CXCL12-208ENST00000496375 DMAC1Q96GE9 116 aa6.72□□□□□ -1.33
CXCL12-208ENST00000496375 S4R3F8 94 aa6.69□□□□□ -1.34
CXCL12-208ENST00000496375 LCA10Q71F78 164 aa6.66□□□□□ -1.34
CXCL12-208ENST00000496375 A8MUN3 132 aa6.65□□□□□ -1.34
CXCL12-208ENST00000496375 KRTAP6-3Q3LI67 103 aa6.65□□□□□ -1.34
CXCL12-208ENST00000496375 NEBP20929 6669 aa6.64□□□□□ -1.35
CXCL12-208ENST00000496375 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
CXCL12-208ENST00000496375 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
CXCL12-208ENST00000496375 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
CXCL12-208ENST00000496375 CSAG1Q6PB30 78 aa6.62□□□□□ -1.35
CXCL12-208ENST00000496375 PSPHP1O15172 72 aa6.61□□□□□ -1.35
CXCL12-208ENST00000496375 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
CXCL12-208ENST00000496375 PRR15LQ9BU68 103 aa6.59□□□□□ -1.35
CXCL12-208ENST00000496375 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
CXCL12-208ENST00000496375 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
CXCL12-208ENST00000496375 Q5VV11 94 aa6.57□□□□□ -1.36
CXCL12-208ENST00000496375 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
CXCL12-208ENST00000496375 SPTSSBQ8NFR3 76 aa6.52□□□□□ -1.37
CXCL12-208ENST00000496375 A6NN06 94 aa6.5□□□□□ -1.37
CXCL12-208ENST00000496375 MT1BP07438 61 aa6.49□□□□□ -1.37
CXCL12-208ENST00000496375 H0YAA0 97 aa6.47□□□□□ -1.37
CXCL12-208ENST00000496375 A6NED7 52 aa6.46□□□□□ -1.38
CXCL12-208ENST00000496375 A0A1B0GU69 56 aa6.44□□□□□ -1.38
CXCL12-208ENST00000496375 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
CXCL12-208ENST00000496375 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
CXCL12-208ENST00000496375 MDN1Q9NU22 5596 aa6.43□□□□□ -1.38
CXCL12-208ENST00000496375 H3BS24 57 aa6.4□□□□□ -1.38
CXCL12-208ENST00000496375 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
CXCL12-208ENST00000496375 SEC61GP60059 68 aa6.38□□□□□ -1.39
CXCL12-208ENST00000496375 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
CXCL12-208ENST00000496375 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
CXCL12-208ENST00000496375 KMT2DO14686 5537 aa6.35□□□□□ -1.39
CXCL12-208ENST00000496375 UQCR11O14957 56 aa6.32□□□□□ -1.4
CXCL12-208ENST00000496375 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
CXCL12-208ENST00000496375 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
CXCL12-208ENST00000496375 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
CXCL12-208ENST00000496375 A8MU10 97 aa6.25□□□□□ -1.41
CXCL12-208ENST00000496375 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
CXCL12-208ENST00000496375 KRTAP20-1Q3LI63 56 aa6.25□□□□□ -1.41
CXCL12-208ENST00000496375 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
CXCL12-208ENST00000496375 P0C880 135 aa6.22□□□□□ -1.41
CXCL12-208ENST00000496375 A0A1B0GU33 70 aa6.18□□□□□ -1.42
CXCL12-208ENST00000496375 R4GN34 69 aa6.13□□□□□ -1.43
CXCL12-208ENST00000496375 M0QZ58 72 aa6.08□□□□□ -1.44
CXCL12-208ENST00000496375 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
CXCL12-208ENST00000496375 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
CXCL12-208ENST00000496375 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
CXCL12-208ENST00000496375 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
CXCL12-208ENST00000496375 MT1XP80297 61 aa6.04□□□□□ -1.44
CXCL12-208ENST00000496375 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
CXCL12-208ENST00000496375 SPRR2EP22531 72 aa6.01□□□□□ -1.45
CXCL12-208ENST00000496375 SPRR2BP35325 72 aa6.01□□□□□ -1.45
CXCL12-208ENST00000496375 SPRR2AP35326 72 aa6.01□□□□□ -1.45
CXCL12-208ENST00000496375 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
CXCL12-208ENST00000496375 K7ERS5 55 aa5.99□□□□□ -1.45
CXCL12-208ENST00000496375 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
CXCL12-208ENST00000496375 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
CXCL12-208ENST00000496375 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
CXCL12-208ENST00000496375 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
CXCL12-208ENST00000496375 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
CXCL12-208ENST00000496375 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
CXCL12-208ENST00000496375 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
CXCL12-208ENST00000496375 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
CXCL12-208ENST00000496375 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
CXCL12-208ENST00000496375 A0A0D9SG42 100 aa5.81□□□□□ -1.48
CXCL12-208ENST00000496375 SPRR2DP22532 72 aa5.81□□□□□ -1.48
CXCL12-208ENST00000496375 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
CXCL12-208ENST00000496375 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
CXCL12-208ENST00000496375 ROMO1P60602 79 aa5.73□□□□□ -1.49
CXCL12-208ENST00000496375 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
CXCL12-208ENST00000496375 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms