RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
HLA-A-208ENST00000496081 SVIPQ8NHG7 77 aa8.22□□□□□ -1.09
HLA-A-208ENST00000496081 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
HLA-A-208ENST00000496081 Q5VV11 94 aa8.21□□□□□ -1.1
HLA-A-208ENST00000496081 H1FX-AS1Q4G0G2 97 aa8.2□□□□□ -1.1
HLA-A-208ENST00000496081 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
HLA-A-208ENST00000496081 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
HLA-A-208ENST00000496081 LCA10Q71F78 164 aa8.17□□□□□ -1.1
HLA-A-208ENST00000496081 BRK1Q8WUW1 75 aa8.17□□□□□ -1.1
HLA-A-208ENST00000496081 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
HLA-A-208ENST00000496081 S4R3F8 94 aa8.15□□□□□ -1.1
HLA-A-208ENST00000496081 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
HLA-A-208ENST00000496081 MUC2Q02817 5179 aa8.1□□□□□ -1.11
HLA-A-208ENST00000496081 A0A1B0GU69 56 aa8.09□□□□□ -1.11
HLA-A-208ENST00000496081 KRTAP19-2Q3LHN2 52 aa8.08□□□□□ -1.12
HLA-A-208ENST00000496081 A6NED7 52 aa8.05□□□□□ -1.12
HLA-A-208ENST00000496081 SEC61GP60059 68 aa8□□□□□ -1.13
HLA-A-208ENST00000496081 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
HLA-A-208ENST00000496081 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
HLA-A-208ENST00000496081 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
HLA-A-208ENST00000496081 UQCR11O14957 56 aa7.87□□□□□ -1.15
HLA-A-208ENST00000496081 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
HLA-A-208ENST00000496081 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
HLA-A-208ENST00000496081 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
HLA-A-208ENST00000496081 A8MU10 97 aa7.85□□□□□ -1.15
HLA-A-208ENST00000496081 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
HLA-A-208ENST00000496081 A0A1B0GU33 70 aa7.83□□□□□ -1.16
HLA-A-208ENST00000496081 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
HLA-A-208ENST00000496081 P0C880 135 aa7.8□□□□□ -1.16
HLA-A-208ENST00000496081 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
HLA-A-208ENST00000496081 H0YAA0 97 aa7.79□□□□□ -1.16
HLA-A-208ENST00000496081 MIR22HGQ0VDD5 57 aa7.79□□□□□ -1.16
HLA-A-208ENST00000496081 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
HLA-A-208ENST00000496081 MT1HP80294 61 aa7.69□□□□□ -1.18
HLA-A-208ENST00000496081 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
HLA-A-208ENST00000496081 A6NN06 94 aa7.66□□□□□ -1.18
HLA-A-208ENST00000496081 M0R2T5 61 aa7.6□□□□□ -1.19
HLA-A-208ENST00000496081 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
HLA-A-208ENST00000496081 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
HLA-A-208ENST00000496081 M0QZ58 72 aa7.57□□□□□ -1.2
HLA-A-208ENST00000496081 A0A0D9SG42 100 aa7.52□□□□□ -1.21
HLA-A-208ENST00000496081 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
HLA-A-208ENST00000496081 R4GN34 69 aa7.52□□□□□ -1.21
HLA-A-208ENST00000496081 K7ERS5 55 aa7.43□□□□□ -1.22
HLA-A-208ENST00000496081 KRTAP9-8Q9BYQ0 159 aa7.42□□□□□ -1.22
HLA-A-208ENST00000496081 CRIPTQ9P021 101 aa7.41□□□□□ -1.22
HLA-A-208ENST00000496081 LINC01554Q52M75 96 aa7.41□□□□□ -1.22
HLA-A-208ENST00000496081 MT2AP02795 61 aa7.4□□□□□ -1.23
HLA-A-208ENST00000496081 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
HLA-A-208ENST00000496081 MT1FP04733 61 aa7.36□□□□□ -1.23
HLA-A-208ENST00000496081 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
HLA-A-208ENST00000496081 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
HLA-A-208ENST00000496081 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
HLA-A-208ENST00000496081 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
HLA-A-208ENST00000496081 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
HLA-A-208ENST00000496081 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
HLA-A-208ENST00000496081 ROMO1P60602 79 aa7.14□□□□□ -1.27
HLA-A-208ENST00000496081 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
HLA-A-208ENST00000496081 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
HLA-A-208ENST00000496081 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
HLA-A-208ENST00000496081 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
HLA-A-208ENST00000496081 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
HLA-A-208ENST00000496081 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
HLA-A-208ENST00000496081 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
HLA-A-208ENST00000496081 MT1BP07438 61 aa6.99□□□□□ -1.29
HLA-A-208ENST00000496081 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
HLA-A-208ENST00000496081 LCE2BO14633 110 aa6.95□□□□□ -1.3
HLA-A-208ENST00000496081 USH2AO75445 5202 aa6.85□□□□□ -1.31
HLA-A-208ENST00000496081 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
HLA-A-208ENST00000496081 MT1XP80297 61 aa6.77□□□□□ -1.33
HLA-A-208ENST00000496081 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
HLA-A-208ENST00000496081 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
HLA-A-208ENST00000496081 TNP1P09430 55 aa6.72□□□□□ -1.33
HLA-A-208ENST00000496081 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
HLA-A-208ENST00000496081 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
HLA-A-208ENST00000496081 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
HLA-A-208ENST00000496081 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
HLA-A-208ENST00000496081 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
HLA-A-208ENST00000496081 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
HLA-A-208ENST00000496081 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
HLA-A-208ENST00000496081 FCGBPQ9Y6R7 5405 aaPredicted RBP6.48□□□□□ -1.37
HLA-A-208ENST00000496081 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
HLA-A-208ENST00000496081 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
HLA-A-208ENST00000496081 KRTAP8-1Q8IUC2 63 aa6.31□□□□□ -1.4
HLA-A-208ENST00000496081 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
HLA-A-208ENST00000496081 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
HLA-A-208ENST00000496081 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
HLA-A-208ENST00000496081 KMT2DO14686 5537 aa6.26□□□□□ -1.41
HLA-A-208ENST00000496081 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
HLA-A-208ENST00000496081 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
HLA-A-208ENST00000496081 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
HLA-A-208ENST00000496081 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
HLA-A-208ENST00000496081 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
HLA-A-208ENST00000496081 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
HLA-A-208ENST00000496081 KRTAP9-7A8MTY7 169 aa6.04□□□□□ -1.44
HLA-A-208ENST00000496081 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
HLA-A-208ENST00000496081 MT1EP04732 61 aa5.93□□□□□ -1.46
HLA-A-208ENST00000496081 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
HLA-A-208ENST00000496081 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
HLA-A-208ENST00000496081 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms