RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 CELSR1Q9NYQ6 3014 aa1.66□□□□□ -2.14
PHC3-215ENST00000495893 VPS13AQ96RL7 3174 aa1.66□□□□□ -2.14
PHC3-215ENST00000495893 CSMD2Q7Z408 3487 aa1.65□□□□□ -2.14
PHC3-215ENST00000495893 SVEP1Q4LDE5 3571 aa1.65□□□□□ -2.14
PHC3-215ENST00000495893 RYR2Q92736 4967 aa1.65□□□□□ -2.15
PHC3-215ENST00000495893 SACSQ9NZJ4 4579 aa1.65□□□□□ -2.15
PHC3-215ENST00000495893 CMYA5Q8N3K9 4069 aa1.65□□□□□ -2.15
PHC3-215ENST00000495893 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
PHC3-215ENST00000495893 DNAH7Q8WXX0 4024 aa1.63□□□□□ -2.15
PHC3-215ENST00000495893 KRTAP3-3Q9BYR6 98 aa1.63□□□□□ -2.15
PHC3-215ENST00000495893 DNAH5Q8TE73 4624 aa1.63□□□□□ -2.15
PHC3-215ENST00000495893 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
PHC3-215ENST00000495893 DYNC1H1Q14204 4646 aaKnown RBP1.62□□□□□ -2.15
PHC3-215ENST00000495893 KRTAP10-5P60370 271 aa1.62□□□□□ -2.15
PHC3-215ENST00000495893 PLECQ15149 4684 aaKnown RBP1.62□□□□□ -2.15
PHC3-215ENST00000495893 COL7A1Q02388 2944 aa1.62□□□□□ -2.15
PHC3-215ENST00000495893 CFAP47Q6ZTR5 3102 aa1.61□□□□□ -2.15
PHC3-215ENST00000495893 HECTD4Q9Y4D8 3996 aa1.6□□□□□ -2.15
PHC3-215ENST00000495893 LCE3AQ5TA76 89 aa1.6□□□□□ -2.15
PHC3-215ENST00000495893 RYR1P21817 5038 aa1.6□□□□□ -2.15
PHC3-215ENST00000495893 ABCA13Q86UQ4 5058 aa1.59□□□□□ -2.15
PHC3-215ENST00000495893 HUWE1Q7Z6Z7 4374 aaKnown RBP1.59□□□□□ -2.15
PHC3-215ENST00000495893 KMT2AQ03164 3969 aa1.59□□□□□ -2.15
PHC3-215ENST00000495893 KRTAP17-1Q9BYP8 105 aa1.59□□□□□ -2.16
PHC3-215ENST00000495893 EPPK1P58107 5090 aaKnown RBP1.59□□□□□ -2.16
PHC3-215ENST00000495893 KMT2CQ8NEZ4 4911 aaKnown RBP1.58□□□□□ -2.16
PHC3-215ENST00000495893 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
PHC3-215ENST00000495893 DNAH3Q8TD57 4116 aa1.57□□□□□ -2.16
PHC3-215ENST00000495893 LRP1BQ9NZR2 4599 aa1.57□□□□□ -2.16
PHC3-215ENST00000495893 MT1HP80294 61 aa1.57□□□□□ -2.16
PHC3-215ENST00000495893 HYDINQ4G0P3 5121 aa1.56□□□□□ -2.16
PHC3-215ENST00000495893 ANK3Q12955 4377 aaKnown RBP1.56□□□□□ -2.16
PHC3-215ENST00000495893 LCE2DQ5TA82 110 aaPredicted RBP1.56□□□□□ -2.16
PHC3-215ENST00000495893 FRAS1Q86XX4 4008 aa1.55□□□□□ -2.16
PHC3-215ENST00000495893 DNAH9Q9NYC9 4486 aa1.55□□□□□ -2.16
PHC3-215ENST00000495893 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
PHC3-215ENST00000495893 HERC2O95714 4834 aa1.54□□□□□ -2.16
PHC3-215ENST00000495893 HERC1Q15751 4861 aa1.54□□□□□ -2.16
PHC3-215ENST00000495893 STARD9Q9P2P6 4700 aa1.53□□□□□ -2.16
PHC3-215ENST00000495893 FAT1Q14517 4588 aa1.53□□□□□ -2.16
PHC3-215ENST00000495893 KRTAP9-6A0A140TA67 174 aa1.53□□□□□ -2.16
PHC3-215ENST00000495893 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
PHC3-215ENST00000495893 DYNC2H1Q8NCM8 4307 aaKnown RBP1.53□□□□□ -2.17
PHC3-215ENST00000495893 VPS13BQ7Z7G8 4022 aa1.52□□□□□ -2.17
PHC3-215ENST00000495893 KRTAP9-2Q9BYQ4 174 aa1.51□□□□□ -2.17
PHC3-215ENST00000495893 KRTAP8-1Q8IUC2 63 aa1.5□□□□□ -2.17
PHC3-215ENST00000495893 FAT3Q8TDW7 4589 aa1.49□□□□□ -2.17
PHC3-215ENST00000495893 DNAH6Q9C0G6 4158 aa1.49□□□□□ -2.17
PHC3-215ENST00000495893 DNAH2Q9P225 4427 aa1.47□□□□□ -2.17
PHC3-215ENST00000495893 DNAH8Q96JB1 4490 aa1.47□□□□□ -2.17
PHC3-215ENST00000495893 LCE2CQ5TA81 110 aa1.47□□□□□ -2.17
PHC3-215ENST00000495893 LCE3CQ5T5A8 94 aa1.47□□□□□ -2.17
PHC3-215ENST00000495893 FAT4Q6V0I7 4981 aa1.47□□□□□ -2.17
PHC3-215ENST00000495893 MT2AP02795 61 aa1.46□□□□□ -2.18
PHC3-215ENST00000495893 LPAP08519 4548 aa1.46□□□□□ -2.18
PHC3-215ENST00000495893 VPS13DQ5THJ4 4388 aa1.45□□□□□ -2.18
PHC3-215ENST00000495893 LORP23490 312 aaPredicted RBP1.45□□□□□ -2.18
PHC3-215ENST00000495893 HMCN2Q8NDA2 5059 aa1.44□□□□□ -2.18
PHC3-215ENST00000495893 SPRR2GQ9BYE4 73 aa1.44□□□□□ -2.18
PHC3-215ENST00000495893 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
PHC3-215ENST00000495893 KIAA1109Q2LD37 5005 aa1.44□□□□□ -2.18
PHC3-215ENST00000495893 DNAH1Q9P2D7 4330 aa1.43□□□□□ -2.18
PHC3-215ENST00000495893 UBR4Q5T4S7 5183 aa1.43□□□□□ -2.18
PHC3-215ENST00000495893 KRTAP10-7P60409 375 aaPredicted RBP1.42□□□□□ -2.18
PHC3-215ENST00000495893 FLGP20930 4061 aaPredicted RBP1.42□□□□□ -2.18
PHC3-215ENST00000495893 DNAH10Q8IVF4 4471 aa1.42□□□□□ -2.18
PHC3-215ENST00000495893 SPRR5A0A1B0GTR4 108 aa1.42□□□□□ -2.18
PHC3-215ENST00000495893 LCE2BO14633 110 aa1.41□□□□□ -2.18
PHC3-215ENST00000495893 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
PHC3-215ENST00000495893 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
PHC3-215ENST00000495893 LCE2AQ5TA79 106 aaPredicted RBP1.41□□□□□ -2.18
PHC3-215ENST00000495893 APOBP04114 4563 aaKnown RBP1.41□□□□□ -2.18
PHC3-215ENST00000495893 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.18
PHC3-215ENST00000495893 SPRR2EP22531 72 aa1.4□□□□□ -2.19
PHC3-215ENST00000495893 SPRR2BP35325 72 aa1.4□□□□□ -2.19
PHC3-215ENST00000495893 SPRR2AP35326 72 aa1.4□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP4-1Q9BYQ7 146 aa1.4□□□□□ -2.19
PHC3-215ENST00000495893 SPRR2DP22532 72 aa1.39□□□□□ -2.19
PHC3-215ENST00000495893 MT1FP04733 61 aa1.39□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP19-6Q3LI70 58 aa1.39□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP9-7A8MTY7 169 aa1.38□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
PHC3-215ENST00000495893 PKHD1P08F94 4074 aa1.38□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP20-1Q3LI63 56 aa1.37□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP19-1Q8IUB9 90 aa1.37□□□□□ -2.19
PHC3-215ENST00000495893 RNF213Q63HN8 5207 aa1.36□□□□□ -2.19
PHC3-215ENST00000495893 KRTAP9-3Q9BYQ3 159 aa1.33□□□□□ -2.2
PHC3-215ENST00000495893 KRTAP9-8Q9BYQ0 159 aa1.33□□□□□ -2.2
PHC3-215ENST00000495893 LCE3EQ5T5B0 92 aa1.33□□□□□ -2.2
PHC3-215ENST00000495893 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
PHC3-215ENST00000495893 PKHD1L1Q86WI1 4243 aa1.33□□□□□ -2.2
PHC3-215ENST00000495893 LCE3BQ5TA77 95 aa1.32□□□□□ -2.2
PHC3-215ENST00000495893 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.32□□□□□ -2.2
PHC3-215ENST00000495893 KRTAP2-3P0C7H8 128 aa1.32□□□□□ -2.2
PHC3-215ENST00000495893 KRTAP2-4Q9BYR9 128 aa1.32□□□□□ -2.2
PHC3-215ENST00000495893 HSPG2P98160 4391 aa1.32□□□□□ -2.2
PHC3-215ENST00000495893 MT1GP13640 62 aa1.28□□□□□ -2.2
PHC3-215ENST00000495893 LCE1AQ5T7P2 110 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms