RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 KRTAP19-2Q3LHN2 52 aa12.04□□□□□ -0.48
PPP1R3F-205ENST00000495799 Q1T7F1 81 aa12.03□□□□□ -0.48
PPP1R3F-205ENST00000495799 KRTAP3-3Q9BYR6 98 aa11.99□□□□□ -0.49
PPP1R3F-205ENST00000495799 LINC01558Q9Y6Z2 57 aa11.97□□□□□ -0.49
PPP1R3F-205ENST00000495799 CSAG1Q6PB30 78 aa11.93□□□□□ -0.5
PPP1R3F-205ENST00000495799 UBR4Q5T4S7 5183 aa11.88□□□□□ -0.51
PPP1R3F-205ENST00000495799 MUC2Q02817 5179 aa11.87□□□□□ -0.51
PPP1R3F-205ENST00000495799 RNF213Q63HN8 5207 aa11.87□□□□□ -0.51
PPP1R3F-205ENST00000495799 PRR15LQ9BU68 103 aa11.86□□□□□ -0.51
PPP1R3F-205ENST00000495799 SEC61GP60059 68 aa11.86□□□□□ -0.51
PPP1R3F-205ENST00000495799 A0A1B0GU69 56 aa11.84□□□□□ -0.51
PPP1R3F-205ENST00000495799 LCE2CQ5TA81 110 aa11.81□□□□□ -0.52
PPP1R3F-205ENST00000495799 PSPHP1O15172 72 aa11.77□□□□□ -0.52
PPP1R3F-205ENST00000495799 FLGP20930 4061 aaPredicted RBP11.71□□□□□ -0.54
PPP1R3F-205ENST00000495799 Q5VV11 94 aa11.67□□□□□ -0.54
PPP1R3F-205ENST00000495799 H0YAA0 97 aa11.66□□□□□ -0.54
PPP1R3F-205ENST00000495799 MT1HP80294 61 aa11.62□□□□□ -0.55
PPP1R3F-205ENST00000495799 M0R2T5 61 aa11.59□□□□□ -0.55
PPP1R3F-205ENST00000495799 ADM2Q7Z4H4 148 aa11.59□□□□□ -0.55
PPP1R3F-205ENST00000495799 KRTAP3-2Q9BYR7 98 aa11.54□□□□□ -0.56
PPP1R3F-205ENST00000495799 FAT4Q6V0I7 4981 aa11.54□□□□□ -0.56
PPP1R3F-205ENST00000495799 KRTAP10-6P60371 365 aaPredicted RBP11.52□□□□□ -0.57
PPP1R3F-205ENST00000495799 A0A1B0GU33 70 aa11.48□□□□□ -0.57
PPP1R3F-205ENST00000495799 A6NED7 52 aa11.48□□□□□ -0.57
PPP1R3F-205ENST00000495799 UQCR11O14957 56 aa11.48□□□□□ -0.57
PPP1R3F-205ENST00000495799 P0C880 135 aa11.45□□□□□ -0.58
PPP1R3F-205ENST00000495799 MIR22HGQ0VDD5 57 aa11.32□□□□□ -0.6
PPP1R3F-205ENST00000495799 M0QZ58 72 aa11.29□□□□□ -0.6
PPP1R3F-205ENST00000495799 CDC42SE1Q9NRR8 79 aa11.27□□□□□ -0.61
PPP1R3F-205ENST00000495799 SPATA8Q6RVD6 105 aa11.26□□□□□ -0.61
PPP1R3F-205ENST00000495799 BRK1Q8WUW1 75 aa11.26□□□□□ -0.61
PPP1R3F-205ENST00000495799 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
PPP1R3F-205ENST00000495799 R4GN34 69 aa11.23□□□□□ -0.61
PPP1R3F-205ENST00000495799 LCE2AQ5TA79 106 aaPredicted RBP11.21□□□□□ -0.61
PPP1R3F-205ENST00000495799 KRTAP13-4Q3LI77 160 aa11.17□□□□□ -0.62
PPP1R3F-205ENST00000495799 KRTAP9-8Q9BYQ0 159 aa11.16□□□□□ -0.62
PPP1R3F-205ENST00000495799 MT2AP02795 61 aa11.14□□□□□ -0.63
PPP1R3F-205ENST00000495799 LORP23490 312 aaPredicted RBP11.14□□□□□ -0.63
PPP1R3F-205ENST00000495799 KRTAP10-10P60014 251 aa11.09□□□□□ -0.63
PPP1R3F-205ENST00000495799 MT1FP04733 61 aa11.06□□□□□ -0.64
PPP1R3F-205ENST00000495799 A8MU10 97 aa11.04□□□□□ -0.64
PPP1R3F-205ENST00000495799 A0A0D9SG42 100 aa11.01□□□□□ -0.65
PPP1R3F-205ENST00000495799 PRO0628Q9UI54 55 aa10.99□□□□□ -0.65
PPP1R3F-205ENST00000495799 LINC01554Q52M75 96 aa10.96□□□□□ -0.65
PPP1R3F-205ENST00000495799 K7ERS5 55 aa10.93□□□□□ -0.66
PPP1R3F-205ENST00000495799 SPRR2GQ9BYE4 73 aa10.92□□□□□ -0.66
PPP1R3F-205ENST00000495799 A6NN06 94 aa10.84□□□□□ -0.67
PPP1R3F-205ENST00000495799 KRTAP19-1Q8IUB9 90 aa10.84□□□□□ -0.67
PPP1R3F-205ENST00000495799 SPINT4Q6UDR6 99 aa10.8□□□□□ -0.68
PPP1R3F-205ENST00000495799 KRTAP12-1P59990 96 aa10.79□□□□□ -0.68
PPP1R3F-205ENST00000495799 KRTAP9-3Q9BYQ3 159 aa10.78□□□□□ -0.68
PPP1R3F-205ENST00000495799 KRTAP12-2P59991 146 aa10.74□□□□□ -0.69
PPP1R3F-205ENST00000495799 PMAIP1Q13794 54 aa10.65□□□□□ -0.7
PPP1R3F-205ENST00000495799 KRTAP19-8Q3LI54 63 aa10.64□□□□□ -0.71
PPP1R3F-205ENST00000495799 PLAC4Q8WY50 150 aa10.62□□□□□ -0.71
PPP1R3F-205ENST00000495799 CAMK2N1Q7Z7J9 78 aa10.52□□□□□ -0.73
PPP1R3F-205ENST00000495799 LCE2BO14633 110 aa10.45□□□□□ -0.74
PPP1R3F-205ENST00000495799 MT1BP07438 61 aa10.45□□□□□ -0.74
PPP1R3F-205ENST00000495799 ROMO1P60602 79 aa10.37□□□□□ -0.75
PPP1R3F-205ENST00000495799 LCE2DQ5TA82 110 aaPredicted RBP10.29□□□□□ -0.76
PPP1R3F-205ENST00000495799 KTN1-AS1Q86SY8 53 aa10.2□□□□□ -0.78
PPP1R3F-205ENST00000495799 C10orf95Q9H7T3 257 aa10.19□□□□□ -0.78
PPP1R3F-205ENST00000495799 PRO2289Q9P1D8 64 aa10.15□□□□□ -0.78
PPP1R3F-205ENST00000495799 MT1XP80297 61 aa10.1□□□□□ -0.79
PPP1R3F-205ENST00000495799 KRTAP10-5P60370 271 aa10.07□□□□□ -0.8
PPP1R3F-205ENST00000495799 USH2AO75445 5202 aa10.04□□□□□ -0.8
PPP1R3F-205ENST00000495799 KRTAP25-1Q3LHN0 102 aa10.02□□□□□ -0.8
PPP1R3F-205ENST00000495799 KRTAP9-2Q9BYQ4 174 aa10.02□□□□□ -0.81
PPP1R3F-205ENST00000495799 TNP1P09430 55 aa10.01□□□□□ -0.81
PPP1R3F-205ENST00000495799 KRTAP19-6Q3LI70 58 aa9.92□□□□□ -0.82
PPP1R3F-205ENST00000495799 PRAC1Q96KF2 57 aa9.91□□□□□ -0.82
PPP1R3F-205ENST00000495799 KRTAP9-6A0A140TA67 174 aa9.84□□□□□ -0.83
PPP1R3F-205ENST00000495799 SSPOA2VEC9 5147 aa9.8□□□□□ -0.84
PPP1R3F-205ENST00000495799 SVIPQ8NHG7 77 aa9.77□□□□□ -0.85
PPP1R3F-205ENST00000495799 KRTAP23-1A1A580 65 aa9.71□□□□□ -0.86
PPP1R3F-205ENST00000495799 PP632Q6XCG6 107 aa9.71□□□□□ -0.86
PPP1R3F-205ENST00000495799 KRTAP10-7P60409 375 aaPredicted RBP9.67□□□□□ -0.86
PPP1R3F-205ENST00000495799 KRTAP10-12P60413 245 aa9.63□□□□□ -0.87
PPP1R3F-205ENST00000495799 FSIP2Q5CZC0 6907 aa9.54□□□□□ -0.88
PPP1R3F-205ENST00000495799 CRCT1Q9UGL9 99 aa9.53□□□□□ -0.88
PPP1R3F-205ENST00000495799 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
PPP1R3F-205ENST00000495799 FCGBPQ9Y6R7 5405 aaPredicted RBP9.34□□□□□ -0.91
PPP1R3F-205ENST00000495799 KRTAP8-1Q8IUC2 63 aa9.34□□□□□ -0.91
PPP1R3F-205ENST00000495799 KRTAP4-8A0A0G2JLE6 195 aa9.27□□□□□ -0.93
PPP1R3F-205ENST00000495799 KRTAP4-8Q9BYQ9 185 aa9.27□□□□□ -0.93
PPP1R3F-205ENST00000495799 KRTAP12-3P60328 96 aa9.16□□□□□ -0.94
PPP1R3F-205ENST00000495799 KRTAP19-5Q3LI72 72 aa9.11□□□□□ -0.95
PPP1R3F-205ENST00000495799 KMT2DO14686 5537 aa9.08□□□□□ -0.96
PPP1R3F-205ENST00000495799 KRTAP19-7Q3SYF9 63 aa9□□□□□ -0.97
PPP1R3F-205ENST00000495799 KRTAP15-1Q3LI76 137 aa8.97□□□□□ -0.97
PPP1R3F-205ENST00000495799 MT1EP04732 61 aa8.88□□□□□ -0.99
PPP1R3F-205ENST00000495799 MACF1Q9UPN3 7388 aaKnown RBP8.88□□□□□ -0.99
PPP1R3F-205ENST00000495799 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.81□□□□□ -1
PPP1R3F-205ENST00000495799 KRTAP9-7A8MTY7 169 aa8.8□□□□□ -1
PPP1R3F-205ENST00000495799 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
PPP1R3F-205ENST00000495799 KRTAP19-4Q3LI73 84 aa8.73□□□□□ -1.01
PPP1R3F-205ENST00000495799 KRTAP5-9P26371 169 aa8.72□□□□□ -1.01
PPP1R3F-205ENST00000495799 MT1LQ93083 61 aa8.69□□□□□ -1.02
PPP1R3F-205ENST00000495799 KRTAP6-3Q3LI67 103 aa8.64□□□□□ -1.03
PPP1R3F-205ENST00000495799 KRTAP19-3Q7Z4W3 81 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms