RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
LMO4-204ENST00000495705 FSIP2Q5CZC0 6907 aa9.36□□□□□ -0.91
LMO4-204ENST00000495705 CRCT1Q9UGL9 99 aa9.35□□□□□ -0.91
LMO4-204ENST00000495705 NDUFC1O43677 76 aa9.33□□□□□ -0.92
LMO4-204ENST00000495705 SERP2Q8N6R1 65 aa9.31□□□□□ -0.92
LMO4-204ENST00000495705 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
LMO4-204ENST00000495705 USH2AO75445 5202 aa9.27□□□□□ -0.93
LMO4-204ENST00000495705 LCE2BO14633 110 aa9.27□□□□□ -0.93
LMO4-204ENST00000495705 SNURFQ9Y675 71 aa9.24□□□□□ -0.93
LMO4-204ENST00000495705 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
LMO4-204ENST00000495705 H0YAA0 97 aa9.17□□□□□ -0.94
LMO4-204ENST00000495705 ACYP2P14621 99 aa9.16□□□□□ -0.94
LMO4-204ENST00000495705 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
LMO4-204ENST00000495705 COX7CP15954 63 aa9.12□□□□□ -0.95
LMO4-204ENST00000495705 SSPOA2VEC9 5147 aa9.11□□□□□ -0.95
LMO4-204ENST00000495705 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
LMO4-204ENST00000495705 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
LMO4-204ENST00000495705 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
LMO4-204ENST00000495705 ADM2Q7Z4H4 148 aa9.04□□□□□ -0.96
LMO4-204ENST00000495705 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
LMO4-204ENST00000495705 CHKB-CPT1BH3BT56 60 aa9□□□□□ -0.97
LMO4-204ENST00000495705 ANAPC13Q9BS18 74 aa8.99□□□□□ -0.97
LMO4-204ENST00000495705 KRTAP19-8Q3LI54 63 aa8.93□□□□□ -0.98
LMO4-204ENST00000495705 KRTAP19-6Q3LI70 58 aa8.93□□□□□ -0.98
LMO4-204ENST00000495705 Q5VV11 94 aa8.92□□□□□ -0.98
LMO4-204ENST00000495705 H7BZZ5 65 aa8.9□□□□□ -0.98
LMO4-204ENST00000495705 P0C880 135 aa8.87□□□□□ -0.99
LMO4-204ENST00000495705 CYSTM1Q9H1C7 97 aa8.87□□□□□ -0.99
LMO4-204ENST00000495705 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
LMO4-204ENST00000495705 MT1BP07438 61 aa8.86□□□□□ -0.99
LMO4-204ENST00000495705 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
LMO4-204ENST00000495705 COA5Q86WW8 74 aa8.82□□□□□ -1
LMO4-204ENST00000495705 R4GN34 69 aa8.81□□□□□ -1
LMO4-204ENST00000495705 CCDC179H3BU77 68 aa8.76□□□□□ -1.01
LMO4-204ENST00000495705 M0QZ58 72 aa8.75□□□□□ -1.01
LMO4-204ENST00000495705 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.68□□□□□ -1.02
LMO4-204ENST00000495705 A6NN06 94 aa8.66□□□□□ -1.02
LMO4-204ENST00000495705 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
LMO4-204ENST00000495705 KRTAP10-5P60370 271 aa8.61□□□□□ -1.03
LMO4-204ENST00000495705 PLAC4Q8WY50 150 aa8.6□□□□□ -1.03
LMO4-204ENST00000495705 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
LMO4-204ENST00000495705 SEC61GP60059 68 aa8.57□□□□□ -1.04
LMO4-204ENST00000495705 SERP1Q9Y6X1 66 aa8.53□□□□□ -1.04
LMO4-204ENST00000495705 TMEM258P61165 79 aa8.51□□□□□ -1.05
LMO4-204ENST00000495705 MACF1Q9UPN3 7388 aaKnown RBP8.5□□□□□ -1.05
LMO4-204ENST00000495705 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
LMO4-204ENST00000495705 PRO2289Q9P1D8 64 aa8.47□□□□□ -1.05
LMO4-204ENST00000495705 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
LMO4-204ENST00000495705 MT1XP80297 61 aa8.4□□□□□ -1.06
LMO4-204ENST00000495705 A0A1B0GU69 56 aa8.38□□□□□ -1.07
LMO4-204ENST00000495705 A0A1B0GU33 70 aa8.36□□□□□ -1.07
LMO4-204ENST00000495705 SYNE2Q8WXH0 6885 aaKnown RBP8.35□□□□□ -1.07
LMO4-204ENST00000495705 SPATA8Q6RVD6 105 aa8.26□□□□□ -1.09
LMO4-204ENST00000495705 PRR15LQ9BU68 103 aa8.26□□□□□ -1.09
LMO4-204ENST00000495705 KRTAP6-3Q3LI67 103 aa8.25□□□□□ -1.09
LMO4-204ENST00000495705 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
LMO4-204ENST00000495705 A0A0D9SG42 100 aa8.21□□□□□ -1.1
LMO4-204ENST00000495705 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
LMO4-204ENST00000495705 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
LMO4-204ENST00000495705 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.1
LMO4-204ENST00000495705 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
LMO4-204ENST00000495705 PCP4P48539 62 aa8.07□□□□□ -1.12
LMO4-204ENST00000495705 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
LMO4-204ENST00000495705 KRTAP5-9P26371 169 aa8.03□□□□□ -1.12
LMO4-204ENST00000495705 A8MU10 97 aa8.02□□□□□ -1.13
LMO4-204ENST00000495705 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
LMO4-204ENST00000495705 KMT2DO14686 5537 aa8.01□□□□□ -1.13
LMO4-204ENST00000495705 KRTAP10-12P60413 245 aa8□□□□□ -1.13
LMO4-204ENST00000495705 V9GYY9 64 aa8□□□□□ -1.13
LMO4-204ENST00000495705 UQCR11O14957 56 aa7.98□□□□□ -1.13
LMO4-204ENST00000495705 KRTAP8-1Q8IUC2 63 aa7.96□□□□□ -1.14
LMO4-204ENST00000495705 Q1T7F1 81 aa7.93□□□□□ -1.14
LMO4-204ENST00000495705 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
LMO4-204ENST00000495705 KRTAP4-8A0A0G2JLE6 195 aa7.9□□□□□ -1.14
LMO4-204ENST00000495705 KRTAP4-8Q9BYQ9 185 aa7.9□□□□□ -1.14
LMO4-204ENST00000495705 SPRR2FQ96RM1 72 aa7.86□□□□□ -1.15
LMO4-204ENST00000495705 PSPHP1O15172 72 aa7.84□□□□□ -1.15
LMO4-204ENST00000495705 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
LMO4-204ENST00000495705 NEBP20929 6669 aa7.82□□□□□ -1.16
LMO4-204ENST00000495705 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
LMO4-204ENST00000495705 MDN1Q9NU22 5596 aa7.76□□□□□ -1.17
LMO4-204ENST00000495705 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
LMO4-204ENST00000495705 SPRR2EP22531 72 aa7.66□□□□□ -1.18
LMO4-204ENST00000495705 SPRR2BP35325 72 aa7.66□□□□□ -1.18
LMO4-204ENST00000495705 SPRR2AP35326 72 aa7.66□□□□□ -1.18
LMO4-204ENST00000495705 K7ERS5 55 aa7.64□□□□□ -1.19
LMO4-204ENST00000495705 A6NED7 52 aa7.62□□□□□ -1.19
LMO4-204ENST00000495705 TNP1P09430 55 aa7.62□□□□□ -1.19
LMO4-204ENST00000495705 LCE1AQ5T7P2 110 aa7.6□□□□□ -1.19
LMO4-204ENST00000495705 KRTAP19-7Q3SYF9 63 aa7.5□□□□□ -1.21
LMO4-204ENST00000495705 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
LMO4-204ENST00000495705 MT1EP04732 61 aa7.43□□□□□ -1.22
LMO4-204ENST00000495705 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
LMO4-204ENST00000495705 SPRR2DP22532 72 aa7.4□□□□□ -1.22
LMO4-204ENST00000495705 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.22
LMO4-204ENST00000495705 KRTAP2-3P0C7H8 128 aa7.38□□□□□ -1.23
LMO4-204ENST00000495705 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
LMO4-204ENST00000495705 KRTAP2-4Q9BYR9 128 aa7.38□□□□□ -1.23
LMO4-204ENST00000495705 CDC42SE1Q9NRR8 79 aa7.36□□□□□ -1.23
LMO4-204ENST00000495705 KRTAP19-3Q7Z4W3 81 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 895.3 ms