RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
NELFE-213ENST00000494956 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
NELFE-213ENST00000494956 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
NELFE-213ENST00000494956 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
NELFE-213ENST00000494956 A0A087WVE0 104 aa4.83□□□□□ -1.64
NELFE-213ENST00000494956 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
NELFE-213ENST00000494956 CYP4F30PQ9H0H9 118 aa4.81□□□□□ -1.64
NELFE-213ENST00000494956 MT1BP07438 61 aa4.8□□□□□ -1.64
NELFE-213ENST00000494956 TRAV22A0A0B4J277 110 aa4.77□□□□□ -1.65
NELFE-213ENST00000494956 HIST1H4AP62805 103 aaKnown RBP4.76□□□□□ -1.65
NELFE-213ENST00000494956 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
NELFE-213ENST00000494956 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
NELFE-213ENST00000494956 ACYP1P07311 99 aa4.74□□□□□ -1.65
NELFE-213ENST00000494956 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
NELFE-213ENST00000494956 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
NELFE-213ENST00000494956 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
NELFE-213ENST00000494956 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
NELFE-213ENST00000494956 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
NELFE-213ENST00000494956 Q5VV11 94 aa4.73□□□□□ -1.65
NELFE-213ENST00000494956 FAM240AA0A1B0GVK7 77 aa4.72□□□□□ -1.65
NELFE-213ENST00000494956 H0Y9P7 68 aa4.72□□□□□ -1.65
NELFE-213ENST00000494956 ATP5EP2Q5VTU8 51 aa4.71□□□□□ -1.66
NELFE-213ENST00000494956 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
NELFE-213ENST00000494956 A6NN06 94 aa4.7□□□□□ -1.66
NELFE-213ENST00000494956 UQCRQO14949 82 aa4.7□□□□□ -1.66
NELFE-213ENST00000494956 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
NELFE-213ENST00000494956 A0A1B0GV90 55 aa4.68□□□□□ -1.66
NELFE-213ENST00000494956 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
NELFE-213ENST00000494956 LINC00643Q86TS7 51 aa4.65□□□□□ -1.67
NELFE-213ENST00000494956 LINC00208Q96KT6 92 aa4.65□□□□□ -1.67
NELFE-213ENST00000494956 ATOX1O00244 68 aa4.64□□□□□ -1.67
NELFE-213ENST00000494956 NDUFC1O43677 76 aa4.63□□□□□ -1.67
NELFE-213ENST00000494956 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
NELFE-213ENST00000494956 IMUPQ9GZP8 106 aa4.62□□□□□ -1.67
NELFE-213ENST00000494956 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
NELFE-213ENST00000494956 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.67
NELFE-213ENST00000494956 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
NELFE-213ENST00000494956 H0YAA0 97 aa4.57□□□□□ -1.68
NELFE-213ENST00000494956 A8MUN3 132 aa4.56□□□□□ -1.68
NELFE-213ENST00000494956 MP68P56378 58 aa4.56□□□□□ -1.68
NELFE-213ENST00000494956 P0C880 135 aa4.52□□□□□ -1.69
NELFE-213ENST00000494956 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
NELFE-213ENST00000494956 MT1XP80297 61 aa4.48□□□□□ -1.69
NELFE-213ENST00000494956 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
NELFE-213ENST00000494956 H3BPC8 53 aa4.47□□□□□ -1.69
NELFE-213ENST00000494956 J3QR89 54 aa4.47□□□□□ -1.69
NELFE-213ENST00000494956 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
NELFE-213ENST00000494956 M0QZ58 72 aa4.44□□□□□ -1.7
NELFE-213ENST00000494956 R4GN34 69 aa4.44□□□□□ -1.7
NELFE-213ENST00000494956 MT-ATP8P03928 68 aa4.43□□□□□ -1.7
NELFE-213ENST00000494956 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
NELFE-213ENST00000494956 NEBP20929 6669 aa4.42□□□□□ -1.7
NELFE-213ENST00000494956 LINC01554Q52M75 96 aa4.4□□□□□ -1.71
NELFE-213ENST00000494956 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.71
NELFE-213ENST00000494956 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
NELFE-213ENST00000494956 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
NELFE-213ENST00000494956 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
NELFE-213ENST00000494956 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
NELFE-213ENST00000494956 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
NELFE-213ENST00000494956 KMT2DO14686 5537 aa4.35□□□□□ -1.71
NELFE-213ENST00000494956 ACYP2P14621 99 aa4.34□□□□□ -1.71
NELFE-213ENST00000494956 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
NELFE-213ENST00000494956 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
NELFE-213ENST00000494956 SPRR2EP22531 72 aa4.32□□□□□ -1.72
NELFE-213ENST00000494956 SPRR2BP35325 72 aa4.32□□□□□ -1.72
NELFE-213ENST00000494956 SPRR2AP35326 72 aa4.32□□□□□ -1.72
NELFE-213ENST00000494956 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
NELFE-213ENST00000494956 K7ERU9 68 aa4.3□□□□□ -1.72
NELFE-213ENST00000494956 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
NELFE-213ENST00000494956 SMIM20Q8N5G0 67 aa4.29□□□□□ -1.72
NELFE-213ENST00000494956 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
NELFE-213ENST00000494956 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
NELFE-213ENST00000494956 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
NELFE-213ENST00000494956 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
NELFE-213ENST00000494956 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
NELFE-213ENST00000494956 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
NELFE-213ENST00000494956 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
NELFE-213ENST00000494956 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
NELFE-213ENST00000494956 SERP2Q8N6R1 65 aa4.19□□□□□ -1.74
NELFE-213ENST00000494956 SPANXA2-OT1Q8N9U9 137 aa4.19□□□□□ -1.74
NELFE-213ENST00000494956 SPRR2DP22532 72 aa4.17□□□□□ -1.74
NELFE-213ENST00000494956 COA5Q86WW8 74 aa4.13□□□□□ -1.75
NELFE-213ENST00000494956 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
NELFE-213ENST00000494956 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
NELFE-213ENST00000494956 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
NELFE-213ENST00000494956 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
NELFE-213ENST00000494956 A0A0D9SG42 100 aa4.07□□□□□ -1.76
NELFE-213ENST00000494956 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
NELFE-213ENST00000494956 COX7CP15954 63 aa4.05□□□□□ -1.76
NELFE-213ENST00000494956 H7BZZ5 65 aa4.02□□□□□ -1.77
NELFE-213ENST00000494956 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
NELFE-213ENST00000494956 MT3P25713 68 aa4.01□□□□□ -1.77
NELFE-213ENST00000494956 SEC61GP60059 68 aa4□□□□□ -1.77
NELFE-213ENST00000494956 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
NELFE-213ENST00000494956 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
NELFE-213ENST00000494956 A0A1B0GU33 70 aa3.99□□□□□ -1.77
NELFE-213ENST00000494956 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
NELFE-213ENST00000494956 MT1EP04732 61 aa3.96□□□□□ -1.78
NELFE-213ENST00000494956 A8MU10 97 aa3.92□□□□□ -1.78
NELFE-213ENST00000494956 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms