RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 WDFY3Q8IZQ1 3526 aa1.69□□□□□ -2.14
CCDC66-222ENST00000494672 NBEAL2Q6ZNJ1 2754 aa1.68□□□□□ -2.14
CCDC66-222ENST00000494672 STAB1Q9NY15 2570 aa1.68□□□□□ -2.14
CCDC66-222ENST00000494672 TENM1Q9UKZ4 2725 aa1.68□□□□□ -2.14
CCDC66-222ENST00000494672 MAP1AP78559 2803 aaPredicted RBP1.67□□□□□ -2.14
CCDC66-222ENST00000494672 ZZEF1O43149 2961 aa1.67□□□□□ -2.14
CCDC66-222ENST00000494672 ANKHD1Q8IWZ3 2542 aaKnown RBP1.67□□□□□ -2.14
CCDC66-222ENST00000494672 AKAP13Q12802 2813 aa1.67□□□□□ -2.14
CCDC66-222ENST00000494672 LRRK2Q5S007 2527 aa1.67□□□□□ -2.14
CCDC66-222ENST00000494672 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
CCDC66-222ENST00000494672 SONP18583 2426 aaKnown RBP1.66□□□□□ -2.14
CCDC66-222ENST00000494672 MEGF8Q7Z7M0 2845 aa1.66□□□□□ -2.14
CCDC66-222ENST00000494672 HYDINQ4G0P3 5121 aa1.65□□□□□ -2.14
CCDC66-222ENST00000494672 FLNCQ14315 2725 aa1.65□□□□□ -2.15
CCDC66-222ENST00000494672 DEFB135Q30KP9 77 aa1.65□□□□□ -2.15
CCDC66-222ENST00000494672 NBEAL1Q6ZS30 2694 aa1.65□□□□□ -2.15
CCDC66-222ENST00000494672 CELSR1Q9NYQ6 3014 aa1.65□□□□□ -2.15
CCDC66-222ENST00000494672 FLNAP21333 2647 aaKnown RBP1.65□□□□□ -2.15
CCDC66-222ENST00000494672 VPS13DQ5THJ4 4388 aa1.65□□□□□ -2.15
CCDC66-222ENST00000494672 FRYLO94915 3013 aa1.64□□□□□ -2.15
CCDC66-222ENST00000494672 RYR1P21817 5038 aa1.64□□□□□ -2.15
CCDC66-222ENST00000494672 NF1P21359 2839 aa1.64□□□□□ -2.15
CCDC66-222ENST00000494672 SPENQ96T58 3664 aaKnown RBP1.63□□□□□ -2.15
CCDC66-222ENST00000494672 RPS29P62273 56 aaKnown RBP1.63□□□□□ -2.15
CCDC66-222ENST00000494672 MTORP42345 2549 aa1.63□□□□□ -2.15
CCDC66-222ENST00000494672 EPPK1P58107 5090 aaKnown RBP1.63□□□□□ -2.15
CCDC66-222ENST00000494672 COL12A1Q99715 3063 aa1.63□□□□□ -2.15
CCDC66-222ENST00000494672 PKD1L1Q8TDX9 2849 aa1.62□□□□□ -2.15
CCDC66-222ENST00000494672 KMT2CQ8NEZ4 4911 aaKnown RBP1.62□□□□□ -2.15
CCDC66-222ENST00000494672 DEFB4AO15263 64 aa1.62□□□□□ -2.15
CCDC66-222ENST00000494672 C9orf92A6NGG3 77 aa1.61□□□□□ -2.15
CCDC66-222ENST00000494672 PDZD2O15018 2839 aa1.6□□□□□ -2.15
CCDC66-222ENST00000494672 USP9YO00507 2555 aaPredicted RBP1.58□□□□□ -2.16
CCDC66-222ENST00000494672 CHD9Q3L8U1 2897 aa1.58□□□□□ -2.16
CCDC66-222ENST00000494672 MUC2Q02817 5179 aa1.58□□□□□ -2.16
CCDC66-222ENST00000494672 TRIOO75962 3097 aa1.58□□□□□ -2.16
CCDC66-222ENST00000494672 LAMA5O15230 3695 aa1.58□□□□□ -2.16
CCDC66-222ENST00000494672 LRBAP50851 2863 aa1.57□□□□□ -2.16
CCDC66-222ENST00000494672 BSNQ9UPA5 3926 aa1.57□□□□□ -2.16
CCDC66-222ENST00000494672 RYR2Q92736 4967 aa1.57□□□□□ -2.16
CCDC66-222ENST00000494672 AKAP9Q99996 3911 aa1.57□□□□□ -2.16
CCDC66-222ENST00000494672 CEP295Q9C0D2 2601 aa1.56□□□□□ -2.16
CCDC66-222ENST00000494672 UTP20O75691 2785 aaKnown RBP1.56□□□□□ -2.16
CCDC66-222ENST00000494672 CSMD2Q7Z408 3487 aa1.56□□□□□ -2.16
CCDC66-222ENST00000494672 CUBNO60494 3623 aa1.56□□□□□ -2.16
CCDC66-222ENST00000494672 ZANQ9Y493 2812 aa1.55□□□□□ -2.16
CCDC66-222ENST00000494672 ACANP16112 2415 aa1.54□□□□□ -2.16
CCDC66-222ENST00000494672 M0R2T5 61 aa1.54□□□□□ -2.16
CCDC66-222ENST00000494672 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
CCDC66-222ENST00000494672 DMXL2Q8TDJ6 3036 aa1.53□□□□□ -2.16
CCDC66-222ENST00000494672 ADGRG4Q8IZF6 3080 aa1.53□□□□□ -2.17
CCDC66-222ENST00000494672 CENPEQ02224 2701 aa1.53□□□□□ -2.17
CCDC66-222ENST00000494672 HERC2O95714 4834 aa1.52□□□□□ -2.17
CCDC66-222ENST00000494672 COL7A1Q02388 2944 aa1.52□□□□□ -2.17
CCDC66-222ENST00000494672 TLN2Q9Y4G6 2542 aa1.52□□□□□ -2.17
CCDC66-222ENST00000494672 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
CCDC66-222ENST00000494672 SMR3AQ99954 134 aa1.51□□□□□ -2.17
CCDC66-222ENST00000494672 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
CCDC66-222ENST00000494672 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
CCDC66-222ENST00000494672 TGP01266 2768 aa1.5□□□□□ -2.17
CCDC66-222ENST00000494672 ATMQ13315 3056 aa1.5□□□□□ -2.17
CCDC66-222ENST00000494672 APCP25054 2843 aa1.49□□□□□ -2.17
CCDC66-222ENST00000494672 ITPR2Q14571 2701 aa1.49□□□□□ -2.17
CCDC66-222ENST00000494672 DCHS2Q6V1P9 2916 aa1.49□□□□□ -2.17
CCDC66-222ENST00000494672 MGAM2Q2M2H8 2515 aa1.48□□□□□ -2.17
CCDC66-222ENST00000494672 HIVEP1P15822 2718 aa1.48□□□□□ -2.17
CCDC66-222ENST00000494672 NIPBLQ6KC79 2804 aaeCLIP1.48□□□□□ -2.17
CCDC66-222ENST00000494672 KRTAP8-1Q8IUC2 63 aa1.47□□□□□ -2.17
CCDC66-222ENST00000494672 ABCA13Q86UQ4 5058 aa1.46□□□□□ -2.18
CCDC66-222ENST00000494672 MYCBP2O75592 4640 aa1.45□□□□□ -2.18
CCDC66-222ENST00000494672 LAMA1P25391 3075 aa1.45□□□□□ -2.18
CCDC66-222ENST00000494672 KRTAP10-4P60372 401 aaPredicted RBP1.44□□□□□ -2.18
CCDC66-222ENST00000494672 GPR98Q8WXG9 6306 aa1.43□□□□□ -2.18
CCDC66-222ENST00000494672 SVEP1Q4LDE5 3571 aa1.43□□□□□ -2.18
CCDC66-222ENST00000494672 HERC1Q15751 4861 aa1.42□□□□□ -2.18
CCDC66-222ENST00000494672 STAB2Q8WWQ8 2551 aa1.42□□□□□ -2.18
CCDC66-222ENST00000494672 VPS13CQ709C8 3753 aa1.41□□□□□ -2.18
CCDC66-222ENST00000494672 DNAH8Q96JB1 4490 aa1.4□□□□□ -2.19
CCDC66-222ENST00000494672 CSMD3Q7Z407 3707 aa1.39□□□□□ -2.19
CCDC66-222ENST00000494672 TACC2O95359 2948 aa1.39□□□□□ -2.19
CCDC66-222ENST00000494672 SACSQ9NZJ4 4579 aa1.39□□□□□ -2.19
CCDC66-222ENST00000494672 NSD1Q96L73 2696 aaPredicted RBP1.38□□□□□ -2.19
CCDC66-222ENST00000494672 LYSTQ99698 3801 aa1.37□□□□□ -2.19
CCDC66-222ENST00000494672 KMT2AQ03164 3969 aa1.36□□□□□ -2.19
CCDC66-222ENST00000494672 TENM3Q9P273 2699 aa1.36□□□□□ -2.19
CCDC66-222ENST00000494672 MXRA5Q9NR99 2828 aa1.36□□□□□ -2.19
CCDC66-222ENST00000494672 FAT4Q6V0I7 4981 aa1.36□□□□□ -2.19
CCDC66-222ENST00000494672 FSIP2Q5CZC0 6907 aa1.35□□□□□ -2.19
CCDC66-222ENST00000494672 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
CCDC66-222ENST00000494672 DNAH3Q8TD57 4116 aa1.35□□□□□ -2.19
CCDC66-222ENST00000494672 VPS13BQ7Z7G8 4022 aa1.35□□□□□ -2.19
CCDC66-222ENST00000494672 ZNF469Q96JG9 3925 aaPredicted RBP1.34□□□□□ -2.19
CCDC66-222ENST00000494672 ANK2Q01484 3957 aa1.34□□□□□ -2.19
CCDC66-222ENST00000494672 FRAS1Q86XX4 4008 aa1.34□□□□□ -2.19
CCDC66-222ENST00000494672 DYNC2H1Q8NCM8 4307 aaKnown RBP1.34□□□□□ -2.2
CCDC66-222ENST00000494672 PRKDCP78527 4128 aaKnown RBP1.34□□□□□ -2.2
CCDC66-222ENST00000494672 KRTAP20-1Q3LI63 56 aa1.32□□□□□ -2.2
CCDC66-222ENST00000494672 SMR3BP02814 79 aaPredicted RBP1.31□□□□□ -2.2
CCDC66-222ENST00000494672 PRM1P04553 51 aa1.31□□□□□ -2.2
CCDC66-222ENST00000494672 DNAH10Q8IVF4 4471 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms