RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 FAM186AA6NE01 2351 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 ZANQ9Y493 2812 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 VPS13CQ709C8 3753 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 STAB1Q9NY15 2570 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 GCN1Q92616 2671 aaKnown RBP0.39□□□□□ -2.35
LMNB1-207ENST00000494185 M0QZ58 72 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 STATHP02808 62 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 COL6A3P12111 3177 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 TRRAPQ9Y4A5 3859 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 NBEAQ8NFP9 2946 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 DMXL2Q8TDJ6 3036 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 RANBP2P49792 3224 aaKnown RBP0.39□□□□□ -2.35
LMNB1-207ENST00000494185 FAT1Q14517 4588 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 PRUNE2Q8WUY3 3088 aa0.39□□□□□ -2.35
LMNB1-207ENST00000494185 TEP1Q99973 2627 aaKnown RBP0.38□□□□□ -2.35
LMNB1-207ENST00000494185 TRIOO75962 3097 aa0.38□□□□□ -2.35
LMNB1-207ENST00000494185 LRBAP50851 2863 aa0.38□□□□□ -2.35
LMNB1-207ENST00000494185 NSD1Q96L73 2696 aaPredicted RBP0.38□□□□□ -2.35
LMNB1-207ENST00000494185 HIVEP3Q5T1R4 2406 aa0.38□□□□□ -2.35
LMNB1-207ENST00000494185 UBR4Q5T4S7 5183 aa0.38□□□□□ -2.35
LMNB1-207ENST00000494185 LRP1BQ9NZR2 4599 aa0.38□□□□□ -2.35
LMNB1-207ENST00000494185 COL7A1Q02388 2944 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 LRRK2Q5S007 2527 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 ADGRG4Q8IZF6 3080 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 HTTP42858 3142 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 FRYLO94915 3013 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 CACNA1AO00555 2505 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 FASNP49327 2511 aaKnown RBP0.37□□□□□ -2.35
LMNB1-207ENST00000494185 CELSR3Q9NYQ7 3312 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 TEX15Q9BXT5 2789 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 USP9XQ93008 2570 aaPredicted RBP0.37□□□□□ -2.35
LMNB1-207ENST00000494185 MXRA5Q9NR99 2828 aa0.37□□□□□ -2.35
LMNB1-207ENST00000494185 MAST4O15021 2626 aa0.36□□□□□ -2.35
LMNB1-207ENST00000494185 NCOR2Q9Y618 2525 aa0.36□□□□□ -2.35
LMNB1-207ENST00000494185 MYO18BQ8IUG5 2567 aa0.36□□□□□ -2.35
LMNB1-207ENST00000494185 ITPR2Q14571 2701 aa0.36□□□□□ -2.35
LMNB1-207ENST00000494185 H0YGG7 62 aa0.36□□□□□ -2.35
LMNB1-207ENST00000494185 PRM1P04553 51 aa0.36□□□□□ -2.35
LMNB1-207ENST00000494185 FLNBO75369 2602 aaKnown RBP0.36□□□□□ -2.35
LMNB1-207ENST00000494185 ANKHD1Q8IWZ3 2542 aaKnown RBP0.36□□□□□ -2.35
LMNB1-207ENST00000494185 ANKRD11Q6UB99 2663 aaPredicted RBP0.36□□□□□ -2.35
LMNB1-207ENST00000494185 WDR87Q6ZQQ6 2873 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 FLNAP21333 2647 aaKnown RBP0.35□□□□□ -2.35
LMNB1-207ENST00000494185 SPG11Q96JI7 2443 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 PCLOQ9Y6V0 5065 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 DEFB136Q30KP8 78 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 DEFB135Q30KP9 77 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 RHPN1-AS1Q9BWJ2 59 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 MTORP42345 2549 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 KMT2DO14686 5537 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 MUC3AQ02505 3323 aa0.35□□□□□ -2.35
LMNB1-207ENST00000494185 A0A096LNI7 61 aa0.34□□□□□ -2.36
LMNB1-207ENST00000494185 M0R2T5 61 aa0.34□□□□□ -2.36
LMNB1-207ENST00000494185 HTN1P15515 57 aa0.34□□□□□ -2.36
LMNB1-207ENST00000494185 BOD1L1Q8NFC6 3051 aa0.34□□□□□ -2.36
LMNB1-207ENST00000494185 COX14Q96I36 57 aa0.34□□□□□ -2.36
LMNB1-207ENST00000494185 NIPBLQ6KC79 2804 aaeCLIP0.34□□□□□ -2.36
LMNB1-207ENST00000494185 ACANP16112 2415 aa0.34□□□□□ -2.36
LMNB1-207ENST00000494185 USP34Q70CQ2 3546 aa0.34□□□□□ -2.36
LMNB1-207ENST00000494185 HRNRQ86YZ3 2850 aaPredicted RBP0.33□□□□□ -2.36
LMNB1-207ENST00000494185 SONP18583 2426 aaKnown RBP0.33□□□□□ -2.36
LMNB1-207ENST00000494185 CSMD2Q7Z408 3487 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 H3BUX3 64 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 TNP1P09430 55 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 SPART-AS1P0CW21 52 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 KRTAP8-1Q8IUC2 63 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 ACACBO00763 2458 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 CEP350Q5VT06 3117 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 TGP01266 2768 aa0.33□□□□□ -2.36
LMNB1-207ENST00000494185 MAP1AP78559 2803 aaPredicted RBP0.32□□□□□ -2.36
LMNB1-207ENST00000494185 SMR3BP02814 79 aaPredicted RBP0.32□□□□□ -2.36
LMNB1-207ENST00000494185 U3KQA8 63 aa0.32□□□□□ -2.36
LMNB1-207ENST00000494185 DCHS1Q96JQ0 3298 aa0.32□□□□□ -2.36
LMNB1-207ENST00000494185 CFAP46Q8IYW2 2715 aa0.32□□□□□ -2.36
LMNB1-207ENST00000494185 TLN2Q9Y4G6 2542 aa0.32□□□□□ -2.36
LMNB1-207ENST00000494185 UTRNP46939 3433 aa0.32□□□□□ -2.36
LMNB1-207ENST00000494185 CFAP47Q6ZTR5 3102 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 C9orf92A6NGG3 77 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 H3BNG1 76 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 DEFB108BQ8NET1 73 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 SYNE2Q8WXH0 6885 aaKnown RBP0.31□□□□□ -2.36
LMNB1-207ENST00000494185 KIAA1109Q2LD37 5005 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 FREM2Q5SZK8 3169 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 DOPEY1Q5JWR5 2465 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 MUC2Q02817 5179 aa0.31□□□□□ -2.36
LMNB1-207ENST00000494185 ASPMQ8IZT6 3477 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
LMNB1-207ENST00000494185 LAMA3Q16787 3333 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 LAMA1P25391 3075 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 SRCAPQ6ZRS2 3230 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 NBEAL1Q6ZS30 2694 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 MYO15AQ9UKN7 3530 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 LRP2P98164 4655 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 WDFY4Q6ZS81 3184 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 HERC1Q15751 4861 aa0.3□□□□□ -2.36
LMNB1-207ENST00000494185 USH2AO75445 5202 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 NEBP20929 6669 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 A0A096LPF7 62 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms