RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 FLG2Q5D862 2391 aaPredicted RBP5.5□□□□□ -1.53
PRPF3-206ENST00000493553 A8MUN3 132 aa5.49□□□□□ -1.53
PRPF3-206ENST00000493553 HRES1P13985 223 aa5.49□□□□□ -1.53
PRPF3-206ENST00000493553 KRTAP5-11Q6L8G4 156 aa5.49□□□□□ -1.53
PRPF3-206ENST00000493553 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
PRPF3-206ENST00000493553 FAT1Q14517 4588 aa5.48□□□□□ -1.53
PRPF3-206ENST00000493553 Q75L30 129 aa5.48□□□□□ -1.53
PRPF3-206ENST00000493553 LCE1EQ5T753 118 aa5.46□□□□□ -1.54
PRPF3-206ENST00000493553 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.54
PRPF3-206ENST00000493553 DMBT1Q9UGM3 2413 aaPredicted RBP5.45□□□□□ -1.54
PRPF3-206ENST00000493553 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
PRPF3-206ENST00000493553 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
PRPF3-206ENST00000493553 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
PRPF3-206ENST00000493553 ATP11AUNQ6ZP68 121 aa5.43□□□□□ -1.54
PRPF3-206ENST00000493553 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
PRPF3-206ENST00000493553 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.41□□□□□ -1.54
PRPF3-206ENST00000493553 SPTSSBQ8NFR3 76 aa5.41□□□□□ -1.54
PRPF3-206ENST00000493553 RYR1P21817 5038 aa5.39□□□□□ -1.55
PRPF3-206ENST00000493553 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
PRPF3-206ENST00000493553 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
PRPF3-206ENST00000493553 PRR15LQ9BU68 103 aa5.37□□□□□ -1.55
PRPF3-206ENST00000493553 SPINK7P58062 85 aa5.36□□□□□ -1.55
PRPF3-206ENST00000493553 RPL37P61927 97 aaKnown RBP5.36□□□□□ -1.55
PRPF3-206ENST00000493553 HSPG2P98160 4391 aa5.36□□□□□ -1.55
PRPF3-206ENST00000493553 RYR3Q15413 4870 aa5.34□□□□□ -1.55
PRPF3-206ENST00000493553 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
PRPF3-206ENST00000493553 PSPHP1O15172 72 aa5.32□□□□□ -1.56
PRPF3-206ENST00000493553 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
PRPF3-206ENST00000493553 Q5VV11 94 aa5.29□□□□□ -1.56
PRPF3-206ENST00000493553 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
PRPF3-206ENST00000493553 SEC61GP60059 68 aa5.27□□□□□ -1.57
PRPF3-206ENST00000493553 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
PRPF3-206ENST00000493553 TNXBP22105 4242 aa5.27□□□□□ -1.57
PRPF3-206ENST00000493553 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
PRPF3-206ENST00000493553 A0A1B0GU69 56 aa5.25□□□□□ -1.57
PRPF3-206ENST00000493553 A6NED7 52 aa5.24□□□□□ -1.57
PRPF3-206ENST00000493553 FAT3Q8TDW7 4589 aa5.24□□□□□ -1.57
PRPF3-206ENST00000493553 LRP1Q07954 4544 aaKnown RBP5.24□□□□□ -1.57
PRPF3-206ENST00000493553 SEC61BP60468 96 aaKnown RBP5.2□□□□□ -1.58
PRPF3-206ENST00000493553 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
PRPF3-206ENST00000493553 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
PRPF3-206ENST00000493553 UQCR11O14957 56 aa5.16□□□□□ -1.58
PRPF3-206ENST00000493553 MYCBP2O75592 4640 aa5.14□□□□□ -1.59
PRPF3-206ENST00000493553 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
PRPF3-206ENST00000493553 EPPK1P58107 5090 aaKnown RBP5.12□□□□□ -1.59
PRPF3-206ENST00000493553 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
PRPF3-206ENST00000493553 S4R3F8 94 aa5.1□□□□□ -1.59
PRPF3-206ENST00000493553 SPATA8Q6RVD6 105 aa5.09□□□□□ -1.59
PRPF3-206ENST00000493553 LCA10Q71F78 164 aa5.08□□□□□ -1.6
PRPF3-206ENST00000493553 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
PRPF3-206ENST00000493553 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
PRPF3-206ENST00000493553 A0A1B0GU33 70 aa5.04□□□□□ -1.6
PRPF3-206ENST00000493553 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
PRPF3-206ENST00000493553 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
PRPF3-206ENST00000493553 CSAG1Q6PB30 78 aa5.03□□□□□ -1.6
PRPF3-206ENST00000493553 HERC2O95714 4834 aa5.03□□□□□ -1.6
PRPF3-206ENST00000493553 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
PRPF3-206ENST00000493553 K7ERS5 55 aa4.96□□□□□ -1.62
PRPF3-206ENST00000493553 H0YAA0 97 aa4.95□□□□□ -1.62
PRPF3-206ENST00000493553 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
PRPF3-206ENST00000493553 A6NN06 94 aa4.92□□□□□ -1.62
PRPF3-206ENST00000493553 A8MU10 97 aa4.92□□□□□ -1.62
PRPF3-206ENST00000493553 LRP2P98164 4655 aa4.9□□□□□ -1.62
PRPF3-206ENST00000493553 M0QZ58 72 aa4.88□□□□□ -1.63
PRPF3-206ENST00000493553 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
PRPF3-206ENST00000493553 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
PRPF3-206ENST00000493553 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
PRPF3-206ENST00000493553 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
PRPF3-206ENST00000493553 P0C880 135 aa4.79□□□□□ -1.64
PRPF3-206ENST00000493553 MUC17Q685J3 4493 aa4.79□□□□□ -1.64
PRPF3-206ENST00000493553 LPAP08519 4548 aa4.76□□□□□ -1.65
PRPF3-206ENST00000493553 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
PRPF3-206ENST00000493553 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
PRPF3-206ENST00000493553 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
PRPF3-206ENST00000493553 R4GN34 69 aa4.73□□□□□ -1.65
PRPF3-206ENST00000493553 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
PRPF3-206ENST00000493553 A0A0D9SG42 100 aa4.71□□□□□ -1.66
PRPF3-206ENST00000493553 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
PRPF3-206ENST00000493553 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
PRPF3-206ENST00000493553 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
PRPF3-206ENST00000493553 HERC1Q15751 4861 aa4.69□□□□□ -1.66
PRPF3-206ENST00000493553 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
PRPF3-206ENST00000493553 ROMO1P60602 79 aa4.67□□□□□ -1.66
PRPF3-206ENST00000493553 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
PRPF3-206ENST00000493553 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
PRPF3-206ENST00000493553 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
PRPF3-206ENST00000493553 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
PRPF3-206ENST00000493553 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
PRPF3-206ENST00000493553 M0R2T5 61 aa4.57□□□□□ -1.68
PRPF3-206ENST00000493553 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
PRPF3-206ENST00000493553 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
PRPF3-206ENST00000493553 MT1HP80294 61 aa4.5□□□□□ -1.69
PRPF3-206ENST00000493553 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
PRPF3-206ENST00000493553 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
PRPF3-206ENST00000493553 KRTAP4-4Q9BYR3 166 aa4.47□□□□□ -1.69
PRPF3-206ENST00000493553 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
PRPF3-206ENST00000493553 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
PRPF3-206ENST00000493553 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
PRPF3-206ENST00000493553 MUC2Q02817 5179 aa4.41□□□□□ -1.7
PRPF3-206ENST00000493553 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms