RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 IMUPQ9GZP8 106 aa5.67□□□□□ -1.5
CTSA-209ENST00000493522 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
CTSA-209ENST00000493522 MP68P56378 58 aa5.64□□□□□ -1.51
CTSA-209ENST00000493522 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
CTSA-209ENST00000493522 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
CTSA-209ENST00000493522 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
CTSA-209ENST00000493522 SYNE2Q8WXH0 6885 aaKnown RBP5.62□□□□□ -1.51
CTSA-209ENST00000493522 FAM236AA0A1B0GUQ0 79 aa5.62□□□□□ -1.51
CTSA-209ENST00000493522 FAM236BA0A1B0GV22 79 aa5.62□□□□□ -1.51
CTSA-209ENST00000493522 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
CTSA-209ENST00000493522 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
CTSA-209ENST00000493522 MT2AP02795 61 aa5.59□□□□□ -1.51
CTSA-209ENST00000493522 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
CTSA-209ENST00000493522 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
CTSA-209ENST00000493522 S4R3F8 94 aa5.57□□□□□ -1.52
CTSA-209ENST00000493522 H3BPC8 53 aa5.56□□□□□ -1.52
CTSA-209ENST00000493522 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
CTSA-209ENST00000493522 SMIM20Q8N5G0 67 aa5.55□□□□□ -1.52
CTSA-209ENST00000493522 TRAV7A0A075B6U4 112 aa5.54□□□□□ -1.52
CTSA-209ENST00000493522 MT1FP04733 61 aa5.54□□□□□ -1.52
CTSA-209ENST00000493522 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
CTSA-209ENST00000493522 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
CTSA-209ENST00000493522 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
CTSA-209ENST00000493522 LCA10Q71F78 164 aa5.51□□□□□ -1.53
CTSA-209ENST00000493522 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
CTSA-209ENST00000493522 A8MUN3 132 aa5.48□□□□□ -1.53
CTSA-209ENST00000493522 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
CTSA-209ENST00000493522 SERP2Q8N6R1 65 aa5.43□□□□□ -1.54
CTSA-209ENST00000493522 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
CTSA-209ENST00000493522 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
CTSA-209ENST00000493522 DMAC1Q96GE9 116 aa5.41□□□□□ -1.54
CTSA-209ENST00000493522 NDUFC1O43677 76 aa5.4□□□□□ -1.54
CTSA-209ENST00000493522 C20orf197Q8N268 126 aa5.4□□□□□ -1.54
CTSA-209ENST00000493522 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
CTSA-209ENST00000493522 COX7CP15954 63 aa5.33□□□□□ -1.56
CTSA-209ENST00000493522 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
CTSA-209ENST00000493522 ACYP2P14621 99 aa5.31□□□□□ -1.56
CTSA-209ENST00000493522 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
CTSA-209ENST00000493522 NEBP20929 6669 aa5.29□□□□□ -1.56
CTSA-209ENST00000493522 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
CTSA-209ENST00000493522 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
CTSA-209ENST00000493522 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
CTSA-209ENST00000493522 ANAPC13Q9BS18 74 aa5.28□□□□□ -1.56
CTSA-209ENST00000493522 H0YAA0 97 aa5.26□□□□□ -1.57
CTSA-209ENST00000493522 CHKB-CPT1BH3BT56 60 aa5.26□□□□□ -1.57
CTSA-209ENST00000493522 ADM2Q7Z4H4 148 aa5.25□□□□□ -1.57
CTSA-209ENST00000493522 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
CTSA-209ENST00000493522 CYSTM1Q9H1C7 97 aa5.21□□□□□ -1.58
CTSA-209ENST00000493522 CRIPTQ9P021 101 aa5.21□□□□□ -1.58
CTSA-209ENST00000493522 SPRR2GQ9BYE4 73 aa5.2□□□□□ -1.58
CTSA-209ENST00000493522 H7BZZ5 65 aa5.19□□□□□ -1.58
CTSA-209ENST00000493522 CCDC179H3BU77 68 aa5.16□□□□□ -1.58
CTSA-209ENST00000493522 COA5Q86WW8 74 aa5.16□□□□□ -1.58
CTSA-209ENST00000493522 P0C880 135 aa5.15□□□□□ -1.59
CTSA-209ENST00000493522 Q5VV11 94 aa5.15□□□□□ -1.59
CTSA-209ENST00000493522 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
CTSA-209ENST00000493522 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
CTSA-209ENST00000493522 MT1BP07438 61 aa5.11□□□□□ -1.59
CTSA-209ENST00000493522 A6NN06 94 aa5.1□□□□□ -1.59
CTSA-209ENST00000493522 R4GN34 69 aa5.1□□□□□ -1.59
CTSA-209ENST00000493522 M0QZ58 72 aa5.09□□□□□ -1.59
CTSA-209ENST00000493522 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
CTSA-209ENST00000493522 KMT2DO14686 5537 aa5.06□□□□□ -1.6
CTSA-209ENST00000493522 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
CTSA-209ENST00000493522 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
CTSA-209ENST00000493522 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
CTSA-209ENST00000493522 SEC61GP60059 68 aa4.98□□□□□ -1.61
CTSA-209ENST00000493522 TMEM258P61165 79 aa4.98□□□□□ -1.61
CTSA-209ENST00000493522 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
CTSA-209ENST00000493522 PLAC4Q8WY50 150 aa4.97□□□□□ -1.61
CTSA-209ENST00000493522 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
CTSA-209ENST00000493522 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
CTSA-209ENST00000493522 A0A1B0GU69 56 aa4.89□□□□□ -1.63
CTSA-209ENST00000493522 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
CTSA-209ENST00000493522 A0A1B0GU33 70 aa4.86□□□□□ -1.63
CTSA-209ENST00000493522 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
CTSA-209ENST00000493522 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
CTSA-209ENST00000493522 MT1XP80297 61 aa4.85□□□□□ -1.63
CTSA-209ENST00000493522 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
CTSA-209ENST00000493522 PRR15LQ9BU68 103 aa4.82□□□□□ -1.64
CTSA-209ENST00000493522 A0A0D9SG42 100 aa4.81□□□□□ -1.64
CTSA-209ENST00000493522 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
CTSA-209ENST00000493522 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
CTSA-209ENST00000493522 SPRR2EP22531 72 aa4.77□□□□□ -1.65
CTSA-209ENST00000493522 SPRR2BP35325 72 aa4.77□□□□□ -1.65
CTSA-209ENST00000493522 SPRR2AP35326 72 aa4.77□□□□□ -1.65
CTSA-209ENST00000493522 PCP4P48539 62 aa4.77□□□□□ -1.65
CTSA-209ENST00000493522 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
CTSA-209ENST00000493522 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
CTSA-209ENST00000493522 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
CTSA-209ENST00000493522 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
CTSA-209ENST00000493522 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
CTSA-209ENST00000493522 A8MU10 97 aa4.69□□□□□ -1.66
CTSA-209ENST00000493522 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
CTSA-209ENST00000493522 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
CTSA-209ENST00000493522 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
CTSA-209ENST00000493522 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
CTSA-209ENST00000493522 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
CTSA-209ENST00000493522 V9GYY9 64 aa4.66□□□□□ -1.66
CTSA-209ENST00000493522 UQCR11O14957 56 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms