RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 HSD52Q0P140 79 aa1.32□□□□□ -2.2
PTCD3-218ENST00000493430 TEN1Q86WV5 123 aa1.32□□□□□ -2.2
PTCD3-218ENST00000493430 C1orf64Q8NEQ6 169 aa1.32□□□□□ -2.2
PTCD3-218ENST00000493430 COPS9Q8WXC6 57 aa1.32□□□□□ -2.2
PTCD3-218ENST00000493430 C14orf132Q9NPU4 83 aa1.32□□□□□ -2.2
PTCD3-218ENST00000493430 TRBV7-4A0A0J9YYF1 115 aa1.31□□□□□ -2.2
PTCD3-218ENST00000493430 TRACP01848 142 aa1.31□□□□□ -2.2
PTCD3-218ENST00000493430 KRTAP25-1Q3LHN0 102 aa1.31□□□□□ -2.2
PTCD3-218ENST00000493430 ORMDL1Q9P0S3 153 aa1.31□□□□□ -2.2
PTCD3-218ENST00000493430 R4GN34 69 aa1.31□□□□□ -2.2
PTCD3-218ENST00000493430 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
PTCD3-218ENST00000493430 IGKV3D-7A0A0C4DH55 119 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 H0YGX0 51 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 DNAL4O96015 105 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 HIST1H4AP62805 103 aaKnown RBP1.3□□□□□ -2.2
PTCD3-218ENST00000493430 SMIM20Q8N5G0 67 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 ZCCHC13Q8WW36 166 aaKnown RBP1.3□□□□□ -2.2
PTCD3-218ENST00000493430 UQCR10Q9UDW1 63 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 SS18L2Q9UHA2 77 aa1.3□□□□□ -2.2
PTCD3-218ENST00000493430 C9JAW5 83 aa1.29□□□□□ -2.2
PTCD3-218ENST00000493430 H3BPC8 53 aa1.29□□□□□ -2.2
PTCD3-218ENST00000493430 K7EQZ3 153 aa1.29□□□□□ -2.2
PTCD3-218ENST00000493430 SPINK7P58062 85 aa1.29□□□□□ -2.2
PTCD3-218ENST00000493430 Q6ZQT0 140 aa1.29□□□□□ -2.2
PTCD3-218ENST00000493430 PPDPFLQ8WWR9 84 aa1.29□□□□□ -2.2
PTCD3-218ENST00000493430 A0A087WVE0 104 aa1.28□□□□□ -2.2
PTCD3-218ENST00000493430 LOC105371267A0A1B0GV96 52 aa1.28□□□□□ -2.2
PTCD3-218ENST00000493430 A0A1B0GX51 115 aa1.28□□□□□ -2.2
PTCD3-218ENST00000493430 TRBV20-1A0A075B6N2 111 aa1.27□□□□□ -2.21
PTCD3-218ENST00000493430 TAX1BP3O14907 124 aa1.27□□□□□ -2.21
PTCD3-218ENST00000493430 LYRM7Q5U5X0 104 aa1.27□□□□□ -2.21
PTCD3-218ENST00000493430 IMUPQ9GZP8 106 aa1.27□□□□□ -2.21
PTCD3-218ENST00000493430 SYNE2Q8WXH0 6885 aaKnown RBP1.26□□□□□ -2.21
PTCD3-218ENST00000493430 MACF1Q9UPN3 7388 aaKnown RBP1.26□□□□□ -2.21
PTCD3-218ENST00000493430 TSTD3H0UI37 97 aa1.26□□□□□ -2.21
PTCD3-218ENST00000493430 K7EP34 96 aa1.26□□□□□ -2.21
PTCD3-218ENST00000493430 TMEM256-PLSCR3K7ERE1 68 aa1.26□□□□□ -2.21
PTCD3-218ENST00000493430 MT1BP07438 61 aa1.26□□□□□ -2.21
PTCD3-218ENST00000493430 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
PTCD3-218ENST00000493430 DSCR8Q96T75 97 aa1.26□□□□□ -2.21
PTCD3-218ENST00000493430 LOC110117498A0A087WWA1 95 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 HCG22E2RYF7 251 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 COX6CP09669 75 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 ATXN8Q156A1 80 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 LCA10Q71F78 164 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 PRR15Q8IV56 129 aa1.25□□□□□ -2.21
PTCD3-218ENST00000493430 MRPL34Q9BQ48 92 aaKnown RBP1.25□□□□□ -2.21
PTCD3-218ENST00000493430 TRAV7A0A075B6U4 112 aa1.24□□□□□ -2.21
PTCD3-218ENST00000493430 A0A1W2PPM0 123 aa1.24□□□□□ -2.21
PTCD3-218ENST00000493430 H3BT86 120 aa1.24□□□□□ -2.21
PTCD3-218ENST00000493430 SMIM6P0DI80 62 aa1.24□□□□□ -2.21
PTCD3-218ENST00000493430 LINC01554Q52M75 96 aa1.24□□□□□ -2.21
PTCD3-218ENST00000493430 TMEM254Q8TBM7 123 aa1.24□□□□□ -2.21
PTCD3-218ENST00000493430 hDV103S1A0JD37 113 aa1.23□□□□□ -2.21
PTCD3-218ENST00000493430 M0R143 59 aa1.23□□□□□ -2.21
PTCD3-218ENST00000493430 SNCGO76070 127 aa1.23□□□□□ -2.21
PTCD3-218ENST00000493430 LINC00846Q9NV44 126 aa1.23□□□□□ -2.21
PTCD3-218ENST00000493430 SPCS1Q9Y6A9 102 aa1.23□□□□□ -2.21
PTCD3-218ENST00000493430 FAM236AA0A1B0GUQ0 79 aa1.22□□□□□ -2.21
PTCD3-218ENST00000493430 FAM236BA0A1B0GV22 79 aa1.22□□□□□ -2.21
PTCD3-218ENST00000493430 NDUFB1O75438 58 aa1.22□□□□□ -2.21
PTCD3-218ENST00000493430 SCGB1A1P11684 91 aa1.22□□□□□ -2.21
PTCD3-218ENST00000493430 NREPQ16612 68 aa1.22□□□□□ -2.21
PTCD3-218ENST00000493430 H1FX-AS1Q4G0G2 97 aa1.22□□□□□ -2.21
PTCD3-218ENST00000493430 CASC2Q6XLA1 102 aa1.22□□□□□ -2.21
PTCD3-218ENST00000493430 JMJD7-PLA2G4BH0Y9G9 81 aa1.21□□□□□ -2.22
PTCD3-218ENST00000493430 J3KT08 172 aa1.21□□□□□ -2.22
PTCD3-218ENST00000493430 C7orf65Q6ZTY9 151 aa1.21□□□□□ -2.22
PTCD3-218ENST00000493430 P0C880 135 aa1.2□□□□□ -2.22
PTCD3-218ENST00000493430 PRO2289Q9P1D8 64 aa1.2□□□□□ -2.22
PTCD3-218ENST00000493430 S4R3F8 94 aa1.2□□□□□ -2.22
PTCD3-218ENST00000493430 A6NN06 94 aa1.19□□□□□ -2.22
PTCD3-218ENST00000493430 TMEM258P61165 79 aa1.19□□□□□ -2.22
PTCD3-218ENST00000493430 ETDBQ3ZM63 59 aa1.19□□□□□ -2.22
PTCD3-218ENST00000493430 NEBP20929 6669 aa1.18□□□□□ -2.22
PTCD3-218ENST00000493430 KMT2DO14686 5537 aa1.18□□□□□ -2.22
PTCD3-218ENST00000493430 KRTAP19-8Q3LI54 63 aa1.18□□□□□ -2.22
PTCD3-218ENST00000493430 RPS28P62857 69 aaKnown RBP1.17□□□□□ -2.22
PTCD3-218ENST00000493430 KLKP1Q107X0 134 aa1.17□□□□□ -2.22
PTCD3-218ENST00000493430 KRTAP13-4Q3LI77 160 aa1.17□□□□□ -2.22
PTCD3-218ENST00000493430 Q5VV11 94 aa1.17□□□□□ -2.22
PTCD3-218ENST00000493430 SPRR2GQ9BYE4 73 aa1.17□□□□□ -2.22
PTCD3-218ENST00000493430 A0A1B0GV90 55 aa1.16□□□□□ -2.22
PTCD3-218ENST00000493430 PDE6GP18545 87 aa1.16□□□□□ -2.22
PTCD3-218ENST00000493430 MT1XP80297 61 aa1.16□□□□□ -2.22
PTCD3-218ENST00000493430 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
PTCD3-218ENST00000493430 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
PTCD3-218ENST00000493430 H0Y9P7 68 aa1.15□□□□□ -2.23
PTCD3-218ENST00000493430 KRTAP20-1Q3LI63 56 aa1.15□□□□□ -2.23
PTCD3-218ENST00000493430 COL5A1-AS1Q5SY13 56 aa1.15□□□□□ -2.23
PTCD3-218ENST00000493430 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
PTCD3-218ENST00000493430 UBL5Q9BZL1 73 aa1.15□□□□□ -2.23
PTCD3-218ENST00000493430 TRAV22A0A0B4J277 110 aa1.14□□□□□ -2.23
PTCD3-218ENST00000493430 SPRR2EP22531 72 aa1.14□□□□□ -2.23
PTCD3-218ENST00000493430 SPRR2BP35325 72 aa1.14□□□□□ -2.23
PTCD3-218ENST00000493430 SPRR2AP35326 72 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms